RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 DPH3Q96FX2 82 aa3.19□□□□□ -1.9
LINC00458-202ENST00000427299 ANAPC11Q9NYG5 84 aa3.19□□□□□ -1.9
LINC00458-202ENST00000427299 FN1P02751 2386 aaKnown RBP3.19□□□□□ -1.9
LINC00458-202ENST00000427299 GCN1Q92616 2671 aaKnown RBP3.18□□□□□ -1.9
LINC00458-202ENST00000427299 ZFYVE26Q68DK2 2539 aa3.18□□□□□ -1.9
LINC00458-202ENST00000427299 RMI2Q96E14 147 aa3.18□□□□□ -1.9
LINC00458-202ENST00000427299 MTORP42345 2549 aa3.18□□□□□ -1.9
LINC00458-202ENST00000427299 CUBNO60494 3623 aa3.18□□□□□ -1.9
LINC00458-202ENST00000427299 DEFB4AO15263 64 aa3.17□□□□□ -1.9
LINC00458-202ENST00000427299 TLX1NBP0CAT3 122 aa3.17□□□□□ -1.9
LINC00458-202ENST00000427299 NREPQ16612 68 aa3.17□□□□□ -1.9
LINC00458-202ENST00000427299 KPRPQ5T749 579 aaPredicted RBP3.17□□□□□ -1.9
LINC00458-202ENST00000427299 Q8NDZ9 215 aa3.17□□□□□ -1.9
LINC00458-202ENST00000427299 WFDC9Q8NEX5 89 aa3.17□□□□□ -1.9
LINC00458-202ENST00000427299 XAGE1AQ9HD64 81 aa3.17□□□□□ -1.9
LINC00458-202ENST00000427299 NF1P21359 2839 aa3.17□□□□□ -1.9
LINC00458-202ENST00000427299 MAST4O15021 2626 aa3.16□□□□□ -1.9
LINC00458-202ENST00000427299 H7BZZ5 65 aa3.16□□□□□ -1.9
LINC00458-202ENST00000427299 SYCNQ0VAF6 134 aa3.16□□□□□ -1.9
LINC00458-202ENST00000427299 Q6ZRU5 148 aa3.16□□□□□ -1.9
LINC00458-202ENST00000427299 WFDC10BQ8IUB3 73 aa3.16□□□□□ -1.9
LINC00458-202ENST00000427299 C15orf56Q8N910 161 aa3.16□□□□□ -1.9
LINC00458-202ENST00000427299 PKIGQ9Y2B9 76 aa3.16□□□□□ -1.9
LINC00458-202ENST00000427299 SETD2Q9BYW2 2564 aaPredicted RBP3.15□□□□□ -1.9
LINC00458-202ENST00000427299 IGKV2D-24A0A075B6R9 120 aa3.15□□□□□ -1.91
LINC00458-202ENST00000427299 ETDCA0A1B0GVM5 59 aa3.15□□□□□ -1.91
LINC00458-202ENST00000427299 F8WEM9 126 aa3.15□□□□□ -1.91
LINC00458-202ENST00000427299 BPY2O14599 106 aa3.15□□□□□ -1.91
LINC00458-202ENST00000427299 Q6ZRX8 168 aa3.15□□□□□ -1.91
LINC00458-202ENST00000427299 CYSTM1Q9H1C7 97 aa3.15□□□□□ -1.91
LINC00458-202ENST00000427299 KCNQ1DNQ9H478 68 aa3.15□□□□□ -1.91
LINC00458-202ENST00000427299 FLNBO75369 2602 aaKnown RBP3.14□□□□□ -1.91
LINC00458-202ENST00000427299 PDZD2O15018 2839 aa3.14□□□□□ -1.91
LINC00458-202ENST00000427299 IGLV5-48A0A075B6I7 105 aa3.14□□□□□ -1.91
LINC00458-202ENST00000427299 SMIM26A0A096LP01 95 aa3.14□□□□□ -1.91
LINC00458-202ENST00000427299 IGKV4-1P06312 121 aa3.14□□□□□ -1.91
LINC00458-202ENST00000427299 TMEM254Q8TBM7 123 aa3.14□□□□□ -1.91
LINC00458-202ENST00000427299 TEP1Q99973 2627 aaKnown RBP3.14□□□□□ -1.91
LINC00458-202ENST00000427299 DNAH3Q8TD57 4116 aa3.14□□□□□ -1.91
LINC00458-202ENST00000427299 ACANP16112 2415 aa3.13□□□□□ -1.91
LINC00458-202ENST00000427299 KRTAP26-1Q6PEX3 210 aa3.13□□□□□ -1.91
LINC00458-202ENST00000427299 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
LINC00458-202ENST00000427299 NSD1Q96L73 2696 aaPredicted RBP3.13□□□□□ -1.91
LINC00458-202ENST00000427299 CMYA5Q8N3K9 4069 aa3.13□□□□□ -1.91
LINC00458-202ENST00000427299 DNAH1Q9P2D7 4330 aa3.12□□□□□ -1.91
LINC00458-202ENST00000427299 ANK2Q01484 3957 aa3.12□□□□□ -1.91
LINC00458-202ENST00000427299 DEFB131BA0A096LNP1 70 aa3.12□□□□□ -1.91
LINC00458-202ENST00000427299 TRAV10A0A0B4J240 114 aa3.12□□□□□ -1.91
LINC00458-202ENST00000427299 M0R2N4 97 aa3.12□□□□□ -1.91
LINC00458-202ENST00000427299 SCXQ7RTU7 201 aa3.12□□□□□ -1.91
LINC00458-202ENST00000427299 C3orf84H3BNL1 204 aa3.11□□□□□ -1.91
LINC00458-202ENST00000427299 NDUFB1O75438 58 aa3.11□□□□□ -1.91
LINC00458-202ENST00000427299 SPRR1AP35321 89 aa3.11□□□□□ -1.91
LINC00458-202ENST00000427299 C1orf137Q5JT78 98 aa3.11□□□□□ -1.91
LINC00458-202ENST00000427299 Q5XG85 94 aa3.11□□□□□ -1.91
LINC00458-202ENST00000427299 TM2D3Q9BRN9 247 aa3.11□□□□□ -1.91
LINC00458-202ENST00000427299 SNURFQ9Y675 71 aa3.11□□□□□ -1.91
LINC00458-202ENST00000427299 TENM4Q6N022 2769 aa3.11□□□□□ -1.91
LINC00458-202ENST00000427299 A0A0U1RQV1 116 aa3.1□□□□□ -1.91
LINC00458-202ENST00000427299 H0Y9J4 135 aa3.1□□□□□ -1.91
LINC00458-202ENST00000427299 ESRGQ1W209 222 aa3.1□□□□□ -1.91
LINC00458-202ENST00000427299 CAMK2N1Q7Z7J9 78 aa3.1□□□□□ -1.91
LINC00458-202ENST00000427299 SPRR4Q96PI1 79 aa3.1□□□□□ -1.91
LINC00458-202ENST00000427299 SMR3AQ99954 134 aa3.1□□□□□ -1.91
LINC00458-202ENST00000427299 NIPBLQ6KC79 2804 aaeCLIP3.1□□□□□ -1.91
LINC00458-202ENST00000427299 IGLV1-50A0A075B6I6 118 aa3.09□□□□□ -1.91
LINC00458-202ENST00000427299 UBE2BP63146 152 aa3.09□□□□□ -1.91
LINC00458-202ENST00000427299 HRCT1Q6UXD1 115 aa3.09□□□□□ -1.91
LINC00458-202ENST00000427299 PP632Q6XCG6 107 aa3.09□□□□□ -1.91
LINC00458-202ENST00000427299 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
LINC00458-202ENST00000427299 ITPR2Q14571 2701 aa3.08□□□□□ -1.92
LINC00458-202ENST00000427299 LCE6AA0A183 80 aa3.08□□□□□ -1.92
LINC00458-202ENST00000427299 HCG22E2RYF7 251 aa3.08□□□□□ -1.92
LINC00458-202ENST00000427299 DEFB105AQ8NG35 78 aa3.08□□□□□ -1.92
LINC00458-202ENST00000427299 HIVEP1P15822 2718 aa3.08□□□□□ -1.92
LINC00458-202ENST00000427299 NBEAL2Q6ZNJ1 2754 aa3.08□□□□□ -1.92
LINC00458-202ENST00000427299 H3BPC8 53 aa3.07□□□□□ -1.92
LINC00458-202ENST00000427299 MP68P56378 58 aa3.07□□□□□ -1.92
LINC00458-202ENST00000427299 CD164Q04900 197 aa3.07□□□□□ -1.92
LINC00458-202ENST00000427299 C4orf26Q17RF5 130 aa3.07□□□□□ -1.92
LINC00458-202ENST00000427299 Q9BRP9 147 aa3.07□□□□□ -1.92
LINC00458-202ENST00000427299 A0A1W2PNM2 257 aa3.06□□□□□ -1.92
LINC00458-202ENST00000427299 VWFP04275 2813 aa3.06□□□□□ -1.92
LINC00458-202ENST00000427299 CNBPP62633 177 aaKnown RBP3.06□□□□□ -1.92
LINC00458-202ENST00000427299 Q8N9L7 120 aa3.06□□□□□ -1.92
LINC00458-202ENST00000427299 C16orf90A8MZG2 172 aa3.05□□□□□ -1.92
LINC00458-202ENST00000427299 PANO1I0J062 215 aa3.05□□□□□ -1.92
LINC00458-202ENST00000427299 PSCAO43653 123 aa3.05□□□□□ -1.92
LINC00458-202ENST00000427299 LINC00588Q9Y4M8 146 aa3.05□□□□□ -1.92
LINC00458-202ENST00000427299 HELZ2Q9BYK8 2649 aaKnown RBP3.05□□□□□ -1.92
LINC00458-202ENST00000427299 ATRQ13535 2644 aa3.04□□□□□ -1.92
LINC00458-202ENST00000427299 TRRAPQ9Y4A5 3859 aa3.04□□□□□ -1.92
LINC00458-202ENST00000427299 K7EQZ3 153 aa3.04□□□□□ -1.92
LINC00458-202ENST00000427299 PSPHP1O15172 72 aa3.04□□□□□ -1.92
LINC00458-202ENST00000427299 UBE2AP49459 152 aa3.04□□□□□ -1.92
LINC00458-202ENST00000427299 FP248Q71RG6 208 aaPredicted RBP3.04□□□□□ -1.92
LINC00458-202ENST00000427299 B9D2Q9BPU9 175 aa3.04□□□□□ -1.92
LINC00458-202ENST00000427299 HIGD2AQ9BW72 106 aa3.04□□□□□ -1.92
LINC00458-202ENST00000427299 CYP4F30PQ9H0H9 118 aa3.04□□□□□ -1.92
LINC00458-202ENST00000427299 LINC00474Q9P2X8 69 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms