RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 PRR3P79522 188 aaKnown RBP4.35□□□□□ -1.71
EPHA4-206ENST00000424339 HAMPP81172 84 aa4.35□□□□□ -1.71
EPHA4-206ENST00000424339 Q8NDZ9 215 aa4.35□□□□□ -1.71
EPHA4-206ENST00000424339 EPPK1P58107 5090 aaKnown RBP4.34□□□□□ -1.71
EPHA4-206ENST00000424339 TRBV10-3A0A0K0K1G6 114 aa4.34□□□□□ -1.71
EPHA4-206ENST00000424339 RPL37AP8A6NKH3 93 aa4.34□□□□□ -1.71
EPHA4-206ENST00000424339 BCE1O60756 84 aa4.34□□□□□ -1.71
EPHA4-206ENST00000424339 Q5VSD8 79 aa4.34□□□□□ -1.71
EPHA4-206ENST00000424339 REG3GQ6UW15 175 aa4.34□□□□□ -1.71
EPHA4-206ENST00000424339 OR13C6PQ8NH95 151 aa4.34□□□□□ -1.71
EPHA4-206ENST00000424339 OBSCN-AS1Q96MR7 158 aa4.34□□□□□ -1.71
EPHA4-206ENST00000424339 PSORS1C2Q9UIG4 136 aa4.34□□□□□ -1.71
EPHA4-206ENST00000424339 BIRC6Q9NR09 4857 aa4.33□□□□□ -1.72
EPHA4-206ENST00000424339 TRAV23DV6A0A075B6W5 121 aa4.33□□□□□ -1.72
EPHA4-206ENST00000424339 A0A1B0GX51 115 aa4.33□□□□□ -1.72
EPHA4-206ENST00000424339 H0Y9J4 135 aa4.33□□□□□ -1.72
EPHA4-206ENST00000424339 SMR3BP02814 79 aaPredicted RBP4.33□□□□□ -1.72
EPHA4-206ENST00000424339 INAFM2P0DMQ5 153 aa4.33□□□□□ -1.72
EPHA4-206ENST00000424339 SPRR1AP35321 89 aa4.33□□□□□ -1.72
EPHA4-206ENST00000424339 C1orf137Q5JT78 98 aa4.33□□□□□ -1.72
EPHA4-206ENST00000424339 LCE1EQ5T753 118 aa4.33□□□□□ -1.72
EPHA4-206ENST00000424339 TRBV7-6A0A0J9YX20 115 aa4.32□□□□□ -1.72
EPHA4-206ENST00000424339 IGLV7-43P04211 117 aa4.32□□□□□ -1.72
EPHA4-206ENST00000424339 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
EPHA4-206ENST00000424339 DIRC1Q969H9 104 aa4.32□□□□□ -1.72
EPHA4-206ENST00000424339 ANAPC13Q9BS18 74 aa4.32□□□□□ -1.72
EPHA4-206ENST00000424339 IMUPQ9GZP8 106 aa4.32□□□□□ -1.72
EPHA4-206ENST00000424339 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
EPHA4-206ENST00000424339 ETDCA0A1B0GVM5 59 aa4.31□□□□□ -1.72
EPHA4-206ENST00000424339 ZNF73O43830 326 aaPredicted RBP4.31□□□□□ -1.72
EPHA4-206ENST00000424339 ZNF861PO60384 105 aa4.31□□□□□ -1.72
EPHA4-206ENST00000424339 UBE2AP49459 152 aa4.31□□□□□ -1.72
EPHA4-206ENST00000424339 SPINK6Q6UWN8 80 aa4.31□□□□□ -1.72
EPHA4-206ENST00000424339 LINC00643Q86TS7 51 aa4.31□□□□□ -1.72
EPHA4-206ENST00000424339 SMCR5Q8TEV8 140 aa4.31□□□□□ -1.72
EPHA4-206ENST00000424339 KRTAP2-2Q9BYT5 123 aa4.31□□□□□ -1.72
EPHA4-206ENST00000424339 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
EPHA4-206ENST00000424339 KRTAP4-16G5E9R7 235 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-206ENST00000424339 DNAL4O96015 105 aa4.3□□□□□ -1.72
EPHA4-206ENST00000424339 KRTAP10-4P60372 401 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-206ENST00000424339 Q6ZRX8 168 aa4.3□□□□□ -1.72
EPHA4-206ENST00000424339 FAM19A1Q7Z5A9 133 aa4.3□□□□□ -1.72
EPHA4-206ENST00000424339 HSPG2P98160 4391 aa4.3□□□□□ -1.72
EPHA4-206ENST00000424339 KIAA1109Q2LD37 5005 aa4.29□□□□□ -1.72
EPHA4-206ENST00000424339 KRTAP13-1Q8IUC0 172 aa4.29□□□□□ -1.72
EPHA4-206ENST00000424339 KRTAP11-1Q8IUC1 163 aa4.29□□□□□ -1.72
EPHA4-206ENST00000424339 DHRS4-AS1Q9P1J3 65 aa4.29□□□□□ -1.72
EPHA4-206ENST00000424339 ELOF1P60002 83 aaKnown RBP4.28□□□□□ -1.72
EPHA4-206ENST00000424339 C6orf99Q4VX62 202 aa4.28□□□□□ -1.72
EPHA4-206ENST00000424339 GAGE2AQ6NT46 116 aa4.28□□□□□ -1.72
EPHA4-206ENST00000424339 ORMDL1Q9P0S3 153 aa4.28□□□□□ -1.72
EPHA4-206ENST00000424339 ZNF706Q9Y5V0 76 aaPredicted RBP4.28□□□□□ -1.72
EPHA4-206ENST00000424339 RYR1P21817 5038 aa4.28□□□□□ -1.73
EPHA4-206ENST00000424339 COX7BP24311 80 aa4.27□□□□□ -1.73
EPHA4-206ENST00000424339 C14orf132Q9NPU4 83 aa4.27□□□□□ -1.73
EPHA4-206ENST00000424339 PCLOQ9Y6V0 5065 aa4.26□□□□□ -1.73
EPHA4-206ENST00000424339 PRLHP81277 87 aa4.26□□□□□ -1.73
EPHA4-206ENST00000424339 Q6JHZ5 121 aa4.26□□□□□ -1.73
EPHA4-206ENST00000424339 HIGD2AQ9BW72 106 aa4.26□□□□□ -1.73
EPHA4-206ENST00000424339 JMJD7-PLA2G4BH0Y9G9 81 aa4.25□□□□□ -1.73
EPHA4-206ENST00000424339 CCDC179H3BU77 68 aa4.25□□□□□ -1.73
EPHA4-206ENST00000424339 HIST1H4AP62805 103 aaKnown RBP4.25□□□□□ -1.73
EPHA4-206ENST00000424339 LINC00575Q6W349 94 aa4.25□□□□□ -1.73
EPHA4-206ENST00000424339 VPS13BQ7Z7G8 4022 aa4.24□□□□□ -1.73
EPHA4-206ENST00000424339 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
EPHA4-206ENST00000424339 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
EPHA4-206ENST00000424339 TMEM256-PLSCR3K7ERE1 68 aa4.24□□□□□ -1.73
EPHA4-206ENST00000424339 CCKP06307 115 aa4.24□□□□□ -1.73
EPHA4-206ENST00000424339 LINC00846Q9NV44 126 aa4.24□□□□□ -1.73
EPHA4-206ENST00000424339 H3BQ85 93 aa4.23□□□□□ -1.73
EPHA4-206ENST00000424339 OXTP01178 125 aa4.23□□□□□ -1.73
EPHA4-206ENST00000424339 FAM229BQ4G0N7 80 aa4.23□□□□□ -1.73
EPHA4-206ENST00000424339 Q75L30 129 aa4.23□□□□□ -1.73
EPHA4-206ENST00000424339 Q9BRP9 147 aa4.23□□□□□ -1.73
EPHA4-206ENST00000424339 LOC110117498A0A087WWA1 95 aa4.22□□□□□ -1.73
EPHA4-206ENST00000424339 hADV29S1A0JD25 119 aa4.22□□□□□ -1.73
EPHA4-206ENST00000424339 SEC61BP60468 96 aaKnown RBP4.21□□□□□ -1.74
EPHA4-206ENST00000424339 LINC00483Q53H64 154 aa4.21□□□□□ -1.74
EPHA4-206ENST00000424339 ATP5EP2Q5VTU8 51 aa4.21□□□□□ -1.74
EPHA4-206ENST00000424339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.21□□□□□ -1.74
EPHA4-206ENST00000424339 SPRR4Q96PI1 79 aa4.21□□□□□ -1.74
EPHA4-206ENST00000424339 FAT1Q14517 4588 aa4.2□□□□□ -1.74
EPHA4-206ENST00000424339 IGLV5-48A0A075B6I7 105 aa4.2□□□□□ -1.74
EPHA4-206ENST00000424339 ATOX1O00244 68 aa4.2□□□□□ -1.74
EPHA4-206ENST00000424339 IGKV2-30P06310 120 aa4.2□□□□□ -1.74
EPHA4-206ENST00000424339 KRTAP1-4P0C5Y4 121 aa4.2□□□□□ -1.74
EPHA4-206ENST00000424339 CRYGAP11844 174 aa4.2□□□□□ -1.74
EPHA4-206ENST00000424339 SPRR1BP22528 89 aa4.2□□□□□ -1.74
EPHA4-206ENST00000424339 Q6ZQT0 140 aa4.2□□□□□ -1.74
EPHA4-206ENST00000424339 HERC2O95714 4834 aa4.19□□□□□ -1.74
EPHA4-206ENST00000424339 UQCRQO14949 82 aa4.19□□□□□ -1.74
EPHA4-206ENST00000424339 ERC2-IT1O76042 136 aa4.19□□□□□ -1.74
EPHA4-206ENST00000424339 C3orf22Q8N5N4 141 aa4.19□□□□□ -1.74
EPHA4-206ENST00000424339 SS18L2Q9UHA2 77 aa4.19□□□□□ -1.74
EPHA4-206ENST00000424339 SRRM2Q9UQ35 2752 aaKnown RBP4.19□□□□□ -1.74
EPHA4-206ENST00000424339 IGKV3D-7A0A0C4DH55 119 aa4.18□□□□□ -1.74
EPHA4-206ENST00000424339 COX7CP15954 63 aa4.18□□□□□ -1.74
EPHA4-206ENST00000424339 PDE6GP18545 87 aa4.18□□□□□ -1.74
EPHA4-206ENST00000424339 RBM3P98179 157 aaKnown RBP4.18□□□□□ -1.74
EPHA4-206ENST00000424339 Q6ZQY7 126 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms