RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 C12orf57Q99622 126 aa13.77□□□□□ -0.21
SMDT1-202ENST00000422252 COX8AP10176 69 aa13.74□□□□□ -0.21
SMDT1-202ENST00000422252 LCE2CQ5TA81 110 aa13.74□□□□□ -0.21
SMDT1-202ENST00000422252 Q6JHZ5 121 aa13.74□□□□□ -0.21
SMDT1-202ENST00000422252 BVES-AS1Q5T3Y7 98 aa13.73□□□□□ -0.21
SMDT1-202ENST00000422252 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.72□□□□□ -0.21
SMDT1-202ENST00000422252 KRTAP19-2Q3LHN2 52 aa13.71□□□□□ -0.21
SMDT1-202ENST00000422252 CLEC2BQ92478 149 aa13.71□□□□□ -0.21
SMDT1-202ENST00000422252 DLEU1O43261 78 aa13.69□□□□□ -0.22
SMDT1-202ENST00000422252 OCIAD2Q56VL3 154 aa13.69□□□□□ -0.22
SMDT1-202ENST00000422252 IGFL1Q6UW32 110 aa13.69□□□□□ -0.22
SMDT1-202ENST00000422252 RPL37P61927 97 aaKnown RBP13.68□□□□□ -0.22
SMDT1-202ENST00000422252 TRBV7-7A0A0K0K1E9 115 aa13.67□□□□□ -0.22
SMDT1-202ENST00000422252 PPDPFLQ8WWR9 84 aa13.67□□□□□ -0.22
SMDT1-202ENST00000422252 SNHG12Q9BXW3 62 aa13.63□□□□□ -0.23
SMDT1-202ENST00000422252 CFC1BP0CG36 223 aa13.62□□□□□ -0.23
SMDT1-202ENST00000422252 CFC1P0CG37 223 aa13.62□□□□□ -0.23
SMDT1-202ENST00000422252 C14orf144Q96I85 54 aa13.62□□□□□ -0.23
SMDT1-202ENST00000422252 RAB37Q96AX2 223 aa13.6□□□□□ -0.23
SMDT1-202ENST00000422252 KRTAP9-6A0A140TA67 174 aa13.59□□□□□ -0.23
SMDT1-202ENST00000422252 MT1HP80294 61 aa13.59□□□□□ -0.23
SMDT1-202ENST00000422252 HIGD1BQ9P298 99 aa13.59□□□□□ -0.23
SMDT1-202ENST00000422252 PAM16Q9Y3D7 125 aa13.58□□□□□ -0.24
SMDT1-202ENST00000422252 SPATA45Q537H7 98 aa13.57□□□□□ -0.24
SMDT1-202ENST00000422252 H3BUT2 72 aa13.56□□□□□ -0.24
SMDT1-202ENST00000422252 A0A0B4J2C4 111 aa13.55□□□□□ -0.24
SMDT1-202ENST00000422252 SNCGO76070 127 aa13.55□□□□□ -0.24
SMDT1-202ENST00000422252 LCE2DQ5TA82 110 aaPredicted RBP13.55□□□□□ -0.24
SMDT1-202ENST00000422252 H0YGX0 51 aa13.53□□□□□ -0.24
SMDT1-202ENST00000422252 C2orf91Q6ZV80 131 aa13.52□□□□□ -0.25
SMDT1-202ENST00000422252 VAMP8Q9BV40 100 aa13.52□□□□□ -0.25
SMDT1-202ENST00000422252 FAM218AQ96MZ4 157 aa13.5□□□□□ -0.25
SMDT1-202ENST00000422252 LST1O00453 97 aa13.49□□□□□ -0.25
SMDT1-202ENST00000422252 Q6Q795 121 aa13.47□□□□□ -0.25
SMDT1-202ENST00000422252 CEND1Q8N111 149 aa13.47□□□□□ -0.25
SMDT1-202ENST00000422252 OBSCN-AS1Q96MR7 158 aa13.47□□□□□ -0.25
SMDT1-202ENST00000422252 NDUFV3P56181 108 aaKnown RBP13.46□□□□□ -0.25
SMDT1-202ENST00000422252 SS18L2Q9UHA2 77 aa13.45□□□□□ -0.26
SMDT1-202ENST00000422252 Q75L30 129 aa13.43□□□□□ -0.26
SMDT1-202ENST00000422252 TEN1Q86WV5 123 aa13.43□□□□□ -0.26
SMDT1-202ENST00000422252 PRO1854Q9UHT4 67 aa13.43□□□□□ -0.26
SMDT1-202ENST00000422252 TMEM238LA0A1B0GVL6 79 aa13.42□□□□□ -0.26
SMDT1-202ENST00000422252 A6NJY4 79 aa13.42□□□□□ -0.26
SMDT1-202ENST00000422252 COX6B2Q6YFQ2 88 aa13.42□□□□□ -0.26
SMDT1-202ENST00000422252 A0A1B0GX51 115 aa13.41□□□□□ -0.26
SMDT1-202ENST00000422252 ATP11AUNQ6ZP68 121 aa13.4□□□□□ -0.26
SMDT1-202ENST00000422252 GHRHP01286 108 aa13.39□□□□□ -0.27
SMDT1-202ENST00000422252 FXYD2P54710 66 aa13.38□□□□□ -0.27
SMDT1-202ENST00000422252 H3BMG7 143 aa13.37□□□□□ -0.27
SMDT1-202ENST00000422252 FABP2P12104 132 aa13.36□□□□□ -0.27
SMDT1-202ENST00000422252 KRTAP10-6P60371 365 aaPredicted RBP13.35□□□□□ -0.27
SMDT1-202ENST00000422252 Q96NJ1 140 aa13.35□□□□□ -0.27
SMDT1-202ENST00000422252 A0A087WSZ3 146 aa13.34□□□□□ -0.27
SMDT1-202ENST00000422252 LORP23490 312 aaPredicted RBP13.34□□□□□ -0.27
SMDT1-202ENST00000422252 M0R2T5 61 aa13.33□□□□□ -0.28
SMDT1-202ENST00000422252 TRIAP1O43715 76 aa13.33□□□□□ -0.28
SMDT1-202ENST00000422252 FLGP20930 4061 aaPredicted RBP13.31□□□□□ -0.28
SMDT1-202ENST00000422252 C20orf166-AS1Q96NR2 134 aa13.27□□□□□ -0.29
SMDT1-202ENST00000422252 A0A1W2PNM2 257 aa13.25□□□□□ -0.29
SMDT1-202ENST00000422252 HSD52Q0P140 79 aa13.25□□□□□ -0.29
SMDT1-202ENST00000422252 PYY3Q5JQD4 70 aa13.25□□□□□ -0.29
SMDT1-202ENST00000422252 DNAL4O96015 105 aa13.24□□□□□ -0.29
SMDT1-202ENST00000422252 CRCT1Q9UGL9 99 aa13.24□□□□□ -0.29
SMDT1-202ENST00000422252 A8MUU9 505 aa13.23□□□□□ -0.29
SMDT1-202ENST00000422252 ORMDL1Q9P0S3 153 aa13.23□□□□□ -0.29
SMDT1-202ENST00000422252 PSMB2P49721 201 aa13.22□□□□□ -0.29
SMDT1-202ENST00000422252 H3BQ85 93 aa13.21□□□□□ -0.29
SMDT1-202ENST00000422252 K7ERJ3 54 aa13.21□□□□□ -0.29
SMDT1-202ENST00000422252 ANKRD29Q8N6D5 301 aa13.2□□□□□ -0.3
SMDT1-202ENST00000422252 COX6CP09669 75 aa13.18□□□□□ -0.3
SMDT1-202ENST00000422252 SIGMAR1Q99720 223 aa13.18□□□□□ -0.3
SMDT1-202ENST00000422252 TRBV7-4A0A0J9YYF1 115 aa13.17□□□□□ -0.3
SMDT1-202ENST00000422252 DSCR10P59022 87 aa13.17□□□□□ -0.3
SMDT1-202ENST00000422252 A0A1B0GV72 72 aa13.16□□□□□ -0.3
SMDT1-202ENST00000422252 TMEM256-PLSCR3K7ERE1 68 aa13.16□□□□□ -0.3
SMDT1-202ENST00000422252 FSIP2Q5CZC0 6907 aa13.15□□□□□ -0.3
SMDT1-202ENST00000422252 IGKV4-1P06312 121 aa13.11□□□□□ -0.31
SMDT1-202ENST00000422252 UQCR10Q9UDW1 63 aa13.11□□□□□ -0.31
SMDT1-202ENST00000422252 LINC00313P59037 77 aa13.09□□□□□ -0.31
SMDT1-202ENST00000422252 CCKP06307 115 aa13.07□□□□□ -0.32
SMDT1-202ENST00000422252 TRACP01848 142 aa13.06□□□□□ -0.32
SMDT1-202ENST00000422252 UBE2V1Q13404 147 aa13.06□□□□□ -0.32
SMDT1-202ENST00000422252 TRBV20-1A0A075B6N2 111 aa13.05□□□□□ -0.32
SMDT1-202ENST00000422252 LINC00472Q9H8W2 130 aa13.04□□□□□ -0.32
SMDT1-202ENST00000422252 KRTAP16-1A8MUX0 517 aa13.03□□□□□ -0.32
SMDT1-202ENST00000422252 DEFB116Q30KQ4 102 aa13.02□□□□□ -0.33
SMDT1-202ENST00000422252 TMA7Q9Y2S6 64 aaKnown RBP13.02□□□□□ -0.33
SMDT1-202ENST00000422252 SCGB1C2P0DMR2 95 aa13□□□□□ -0.33
SMDT1-202ENST00000422252 NOTCH2NLQ7Z3S9 236 aa12.99□□□□□ -0.33
SMDT1-202ENST00000422252 RBM3P98179 157 aaKnown RBP12.96□□□□□ -0.33
SMDT1-202ENST00000422252 VPS25Q9BRG1 176 aa12.96□□□□□ -0.33
SMDT1-202ENST00000422252 IGHV6-1A0A0B4J1U7 121 aa12.95□□□□□ -0.34
SMDT1-202ENST00000422252 DSCR8Q96T75 97 aa12.93□□□□□ -0.34
SMDT1-202ENST00000422252 BAALC-AS2P0C853 105 aa12.88□□□□□ -0.35
SMDT1-202ENST00000422252 A0A1B0GVX0 72 aa12.86□□□□□ -0.35
SMDT1-202ENST00000422252 C8orf87E5RJ46 101 aa12.86□□□□□ -0.35
SMDT1-202ENST00000422252 FAM236DA0A1B0GTK5 79 aa12.85□□□□□ -0.35
SMDT1-202ENST00000422252 FAM236CP0DP71 79 aa12.85□□□□□ -0.35
SMDT1-202ENST00000422252 C9JAW5 83 aa12.84□□□□□ -0.35
SMDT1-202ENST00000422252 C21orf62-AS1Q17RA5 79 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms