RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 BIRC6Q9NR09 4857 aa12.91□□□□□ -0.34
ABCF3-202ENST00000421340 SMCPP49901 116 aaPredicted RBP12.9□□□□□ -0.34
ABCF3-202ENST00000421340 SMIM29Q86T20 159 aa12.9□□□□□ -0.34
ABCF3-202ENST00000421340 FAM229BQ4G0N7 80 aa12.89□□□□□ -0.35
ABCF3-202ENST00000421340 MTURNQ8N3F0 131 aa12.89□□□□□ -0.35
ABCF3-202ENST00000421340 NDUFV3P56181 108 aaKnown RBP12.88□□□□□ -0.35
ABCF3-202ENST00000421340 LAMTOR3Q9UHA4 124 aa12.88□□□□□ -0.35
ABCF3-202ENST00000421340 KRTAP1-4P0C5Y4 121 aa12.87□□□□□ -0.35
ABCF3-202ENST00000421340 SRRM2Q9UQ35 2752 aaKnown RBP12.86□□□□□ -0.35
ABCF3-202ENST00000421340 JMJD7-PLA2G4BH0Y9G9 81 aa12.83□□□□□ -0.36
ABCF3-202ENST00000421340 C3orf22Q8N5N4 141 aa12.82□□□□□ -0.36
ABCF3-202ENST00000421340 ANAPC11Q9NYG5 84 aa12.82□□□□□ -0.36
ABCF3-202ENST00000421340 IGLV8-61A0A075B6I0 122 aa12.81□□□□□ -0.36
ABCF3-202ENST00000421340 F8WEM9 126 aa12.81□□□□□ -0.36
ABCF3-202ENST00000421340 OBSCN-AS1Q96MR7 158 aa12.81□□□□□ -0.36
ABCF3-202ENST00000421340 CRYGAP11844 174 aa12.79□□□□□ -0.36
ABCF3-202ENST00000421340 RBM3P98179 157 aaKnown RBP12.78□□□□□ -0.36
ABCF3-202ENST00000421340 TEN1Q86WV5 123 aa12.78□□□□□ -0.36
ABCF3-202ENST00000421340 Q6JHZ5 121 aa12.75□□□□□ -0.37
ABCF3-202ENST00000421340 PKHD1L1Q86WI1 4243 aa12.74□□□□□ -0.37
ABCF3-202ENST00000421340 A0A087X002 238 aa12.74□□□□□ -0.37
ABCF3-202ENST00000421340 ETDBQ3ZM63 59 aa12.74□□□□□ -0.37
ABCF3-202ENST00000421340 SSBP3-AS1Q7Z2R9 100 aa12.74□□□□□ -0.37
ABCF3-202ENST00000421340 IGLV9-49A0A0B4J1Y8 123 aa12.73□□□□□ -0.37
ABCF3-202ENST00000421340 Q8NBF4 154 aa12.73□□□□□ -0.37
ABCF3-202ENST00000421340 KRTAP13-2Q52LG2 175 aa12.72□□□□□ -0.37
ABCF3-202ENST00000421340 DSCR8Q96T75 97 aa12.72□□□□□ -0.37
ABCF3-202ENST00000421340 TRBV7-4A0A0J9YYF1 115 aa12.71□□□□□ -0.37
ABCF3-202ENST00000421340 PDE6GP18545 87 aa12.71□□□□□ -0.37
ABCF3-202ENST00000421340 C21orf62-AS1Q17RA5 79 aa12.7□□□□□ -0.38
ABCF3-202ENST00000421340 C9orf153Q5TBE3 101 aa12.7□□□□□ -0.38
ABCF3-202ENST00000421340 KRTAP4-5Q9BYR2 181 aa12.7□□□□□ -0.38
ABCF3-202ENST00000421340 LOC110117498A0A087WWA1 95 aa12.69□□□□□ -0.38
ABCF3-202ENST00000421340 MOBPQ13875 183 aa12.69□□□□□ -0.38
ABCF3-202ENST00000421340 HERC2O95714 4834 aa12.68□□□□□ -0.38
ABCF3-202ENST00000421340 PRR26Q8N8Z3 221 aa12.67□□□□□ -0.38
ABCF3-202ENST00000421340 A0A1B0GV72 72 aa12.66□□□□□ -0.38
ABCF3-202ENST00000421340 IGFL1Q6UW32 110 aa12.66□□□□□ -0.38
ABCF3-202ENST00000421340 C14orf132Q9NPU4 83 aa12.66□□□□□ -0.38
ABCF3-202ENST00000421340 TYMSOSQ8TAI1 123 aa12.65□□□□□ -0.38
ABCF3-202ENST00000421340 Q6ZQT0 140 aa12.63□□□□□ -0.39
ABCF3-202ENST00000421340 OXTP01178 125 aa12.61□□□□□ -0.39
ABCF3-202ENST00000421340 Q6Q795 121 aa12.61□□□□□ -0.39
ABCF3-202ENST00000421340 KRTAP10-8P60410 259 aa12.6□□□□□ -0.39
ABCF3-202ENST00000421340 CD164Q04900 197 aa12.6□□□□□ -0.39
ABCF3-202ENST00000421340 CCKP06307 115 aa12.59□□□□□ -0.39
ABCF3-202ENST00000421340 A0A1B0GW54 56 aa12.58□□□□□ -0.4
ABCF3-202ENST00000421340 A0A1W2PNM2 257 aa12.57□□□□□ -0.4
ABCF3-202ENST00000421340 A0A0G2JQZ4 141 aa12.56□□□□□ -0.4
ABCF3-202ENST00000421340 SPAG11AQ6PDA7 123 aa12.54□□□□□ -0.4
ABCF3-202ENST00000421340 KRTAP29-1A8MX34 341 aaPredicted RBP12.52□□□□□ -0.41
ABCF3-202ENST00000421340 C4orf48Q5BLP8 95 aa12.51□□□□□ -0.41
ABCF3-202ENST00000421340 LINC00304Q8N9R0 145 aa12.51□□□□□ -0.41
ABCF3-202ENST00000421340 TRBV7-7A0A0K0K1E9 115 aa12.5□□□□□ -0.41
ABCF3-202ENST00000421340 VPS25Q9BRG1 176 aa12.5□□□□□ -0.41
ABCF3-202ENST00000421340 SPINK1P00995 79 aa12.49□□□□□ -0.41
ABCF3-202ENST00000421340 J3QR89 54 aa12.48□□□□□ -0.41
ABCF3-202ENST00000421340 MT1HL1P0DM35 61 aa12.48□□□□□ -0.41
ABCF3-202ENST00000421340 RPS29P62273 56 aaKnown RBP12.47□□□□□ -0.41
ABCF3-202ENST00000421340 ACYP1P07311 99 aa12.46□□□□□ -0.41
ABCF3-202ENST00000421340 HRCT1Q6UXD1 115 aa12.46□□□□□ -0.41
ABCF3-202ENST00000421340 FAM240AA0A1B0GVK7 77 aa12.45□□□□□ -0.42
ABCF3-202ENST00000421340 Q5XG85 94 aa12.45□□□□□ -0.42
ABCF3-202ENST00000421340 FAT3Q8TDW7 4589 aa12.44□□□□□ -0.42
ABCF3-202ENST00000421340 FLG2Q5D862 2391 aaPredicted RBP12.43□□□□□ -0.42
ABCF3-202ENST00000421340 LRP1Q07954 4544 aaKnown RBP12.42□□□□□ -0.42
ABCF3-202ENST00000421340 A0A087WSZ3 146 aa12.41□□□□□ -0.42
ABCF3-202ENST00000421340 SS18L2Q9UHA2 77 aa12.41□□□□□ -0.42
ABCF3-202ENST00000421340 LIMD2Q9BT23 127 aa12.4□□□□□ -0.42
ABCF3-202ENST00000421340 ABCA13Q86UQ4 5058 aa12.4□□□□□ -0.42
ABCF3-202ENST00000421340 K7ERU9 68 aa12.39□□□□□ -0.43
ABCF3-202ENST00000421340 ASB16-AS1Q495Z4 193 aa12.38□□□□□ -0.43
ABCF3-202ENST00000421340 LINC00846Q9NV44 126 aa12.36□□□□□ -0.43
ABCF3-202ENST00000421340 TNXBP22105 4242 aa12.35□□□□□ -0.43
ABCF3-202ENST00000421340 MYCBP2O75592 4640 aa12.35□□□□□ -0.43
ABCF3-202ENST00000421340 NREPQ16612 68 aa12.33□□□□□ -0.44
ABCF3-202ENST00000421340 UBL5Q9BZL1 73 aa12.32□□□□□ -0.44
ABCF3-202ENST00000421340 J3QL48 77 aa12.3□□□□□ -0.44
ABCF3-202ENST00000421340 Q6ZVQ6 151 aa12.28□□□□□ -0.44
ABCF3-202ENST00000421340 LINC00472Q9H8W2 130 aa12.28□□□□□ -0.44
ABCF3-202ENST00000421340 C1orf195Q5TG92 126 aa12.24□□□□□ -0.45
ABCF3-202ENST00000421340 Q96NJ1 140 aa12.24□□□□□ -0.45
ABCF3-202ENST00000421340 J3KT08 172 aa12.22□□□□□ -0.45
ABCF3-202ENST00000421340 LINC00643Q86TS7 51 aa12.19□□□□□ -0.46
ABCF3-202ENST00000421340 CDIP1Q9H305 208 aa12.19□□□□□ -0.46
ABCF3-202ENST00000421340 SIGMAR1Q99720 223 aa12.17□□□□□ -0.46
ABCF3-202ENST00000421340 BPY2O14599 106 aa12.16□□□□□ -0.46
ABCF3-202ENST00000421340 DMBT1Q9UGM3 2413 aaPredicted RBP12.16□□□□□ -0.46
ABCF3-202ENST00000421340 IGKV4-1P06312 121 aa12.14□□□□□ -0.47
ABCF3-202ENST00000421340 CXCL6P80162 114 aa12.14□□□□□ -0.47
ABCF3-202ENST00000421340 DEFB116Q30KQ4 102 aa12.14□□□□□ -0.47
ABCF3-202ENST00000421340 ATP5EP2Q5VTU8 51 aa12.14□□□□□ -0.47
ABCF3-202ENST00000421340 FP248Q71RG6 208 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-202ENST00000421340 DSCR10P59022 87 aa12.09□□□□□ -0.47
ABCF3-202ENST00000421340 PCLOQ9Y6V0 5065 aa12.09□□□□□ -0.47
ABCF3-202ENST00000421340 A8MWP4 228 aa12.08□□□□□ -0.48
ABCF3-202ENST00000421340 RETNLBQ9BQ08 111 aa12.08□□□□□ -0.48
ABCF3-202ENST00000421340 NDUFB1O75438 58 aa12.07□□□□□ -0.48
ABCF3-202ENST00000421340 IGKV3D-7A0A0C4DH55 119 aa12.03□□□□□ -0.48
ABCF3-202ENST00000421340 PRR15Q8IV56 129 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms