RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TRBV7-6A0A0J9YX20 115 aa4.12□□□□□ -1.75
TRIM39-206ENST00000420746 PEA15Q15121 130 aa4.12□□□□□ -1.75
TRIM39-206ENST00000420746 Q5VV11 94 aa4.12□□□□□ -1.75
TRIM39-206ENST00000420746 CLEC2BQ92478 149 aa4.12□□□□□ -1.75
TRIM39-206ENST00000420746 F8WEM9 126 aa4.11□□□□□ -1.75
TRIM39-206ENST00000420746 NDUFA5Q16718 116 aa4.11□□□□□ -1.75
TRIM39-206ENST00000420746 TCTE3Q8IZS6 198 aa4.11□□□□□ -1.75
TRIM39-206ENST00000420746 TRAV12-1A0A0B4J245 112 aa4.1□□□□□ -1.75
TRIM39-206ENST00000420746 MT-ND4LP03901 98 aa4.1□□□□□ -1.75
TRIM39-206ENST00000420746 S100A1P23297 94 aa4.1□□□□□ -1.75
TRIM39-206ENST00000420746 OR13C6PQ8NH95 151 aa4.1□□□□□ -1.75
TRIM39-206ENST00000420746 SPANXDQ9BXN6 97 aa4.1□□□□□ -1.75
TRIM39-206ENST00000420746 SPANXCQ9NY87 97 aa4.09□□□□□ -1.75
TRIM39-206ENST00000420746 A0A1B0GWB2 263 aa4.08□□□□□ -1.76
TRIM39-206ENST00000420746 NMUP48645 174 aa4.08□□□□□ -1.76
TRIM39-206ENST00000420746 TSPEAR-AS2P59090 65 aa4.08□□□□□ -1.76
TRIM39-206ENST00000420746 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
TRIM39-206ENST00000420746 FAM218AQ96MZ4 157 aa4.08□□□□□ -1.76
TRIM39-206ENST00000420746 RPS10P5Q9NQ39 176 aa4.08□□□□□ -1.76
TRIM39-206ENST00000420746 DSCR10P59022 87 aa4.07□□□□□ -1.76
TRIM39-206ENST00000420746 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
TRIM39-206ENST00000420746 LEPROTO15243 131 aa4.06□□□□□ -1.76
TRIM39-206ENST00000420746 SS18L2Q9UHA2 77 aa4.06□□□□□ -1.76
TRIM39-206ENST00000420746 TRAV13-2A0A0B4J235 113 aa4.05□□□□□ -1.76
TRIM39-206ENST00000420746 LINC00614P0C842 121 aa4.05□□□□□ -1.76
TRIM39-206ENST00000420746 NPC2P61916 151 aa4.05□□□□□ -1.76
TRIM39-206ENST00000420746 LCE5AQ5TCM9 118 aa4.05□□□□□ -1.76
TRIM39-206ENST00000420746 NHP2Q9NX24 153 aaKnown RBP4.05□□□□□ -1.76
TRIM39-206ENST00000420746 A4D1N5 150 aa4.04□□□□□ -1.76
TRIM39-206ENST00000420746 J3QQQ9 107 aa4.04□□□□□ -1.76
TRIM39-206ENST00000420746 PMCHL1Q16048 86 aa4.04□□□□□ -1.76
TRIM39-206ENST00000420746 URB1-AS1Q96HZ7 61 aa4.04□□□□□ -1.76
TRIM39-206ENST00000420746 A0A1W2PNM2 257 aa4.03□□□□□ -1.76
TRIM39-206ENST00000420746 ADAMTSL4-AS1Q5T5F5 129 aa4.03□□□□□ -1.76
TRIM39-206ENST00000420746 KRTAP4-9Q9BYQ8 210 aa4.03□□□□□ -1.76
TRIM39-206ENST00000420746 LINC00313P59037 77 aa4.02□□□□□ -1.77
TRIM39-206ENST00000420746 LINC00518Q8N0U6 118 aa4.02□□□□□ -1.77
TRIM39-206ENST00000420746 SPINK7P58062 85 aa4.01□□□□□ -1.77
TRIM39-206ENST00000420746 COX19Q49B96 90 aa4.01□□□□□ -1.77
TRIM39-206ENST00000420746 OCIAD2Q56VL3 154 aa4.01□□□□□ -1.77
TRIM39-206ENST00000420746 IFI27L1Q96BM0 104 aa4.01□□□□□ -1.77
TRIM39-206ENST00000420746 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
TRIM39-206ENST00000420746 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
TRIM39-206ENST00000420746 A0A0J9YXY3 114 aa4□□□□□ -1.77
TRIM39-206ENST00000420746 C18orf32Q8TCD1 76 aa4□□□□□ -1.77
TRIM39-206ENST00000420746 LINC00308Q8TCZ7 52 aa4□□□□□ -1.77
TRIM39-206ENST00000420746 SEC11CQ9BY50 192 aa4□□□□□ -1.77
TRIM39-206ENST00000420746 COLCA2A8K830 154 aa3.99□□□□□ -1.77
TRIM39-206ENST00000420746 FABP9Q0Z7S8 132 aa3.99□□□□□ -1.77
TRIM39-206ENST00000420746 HERVK_113P61574 105 aa3.98□□□□□ -1.77
TRIM39-206ENST00000420746 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
TRIM39-206ENST00000420746 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
TRIM39-206ENST00000420746 SCGB1D1O95968 90 aa3.97□□□□□ -1.77
TRIM39-206ENST00000420746 SLC7A5P1Q8MH63 180 aa3.97□□□□□ -1.77
TRIM39-206ENST00000420746 PLNP26678 52 aa3.96□□□□□ -1.78
TRIM39-206ENST00000420746 LITAFQ99732 161 aa3.96□□□□□ -1.78
TRIM39-206ENST00000420746 IMUPQ9GZP8 106 aa3.96□□□□□ -1.78
TRIM39-206ENST00000420746 TRIAP1O43715 76 aa3.95□□□□□ -1.78
TRIM39-206ENST00000420746 TIMM17BO60830 172 aa3.95□□□□□ -1.78
TRIM39-206ENST00000420746 H1FX-AS1Q4G0G2 97 aa3.95□□□□□ -1.78
TRIM39-206ENST00000420746 SIGMAR1Q99720 223 aa3.95□□□□□ -1.78
TRIM39-206ENST00000420746 ZCCHC13Q8WW36 166 aaKnown RBP3.94□□□□□ -1.78
TRIM39-206ENST00000420746 S100PP25815 95 aa3.93□□□□□ -1.78
TRIM39-206ENST00000420746 Q6ZQY7 126 aa3.93□□□□□ -1.78
TRIM39-206ENST00000420746 TEN1Q86WV5 123 aa3.93□□□□□ -1.78
TRIM39-206ENST00000420746 PPDPFLQ8WWR9 84 aa3.93□□□□□ -1.78
TRIM39-206ENST00000420746 KRTAP4-11Q9BYQ6 195 aa3.93□□□□□ -1.78
TRIM39-206ENST00000420746 A0A087WSZ3 146 aa3.92□□□□□ -1.78
TRIM39-206ENST00000420746 FAM236AA0A1B0GUQ0 79 aa3.91□□□□□ -1.78
TRIM39-206ENST00000420746 FAM236BA0A1B0GV22 79 aa3.91□□□□□ -1.78
TRIM39-206ENST00000420746 CHCHD1Q96BP2 118 aaKnown RBP3.91□□□□□ -1.78
TRIM39-206ENST00000420746 C3orf79P0CE67 100 aa3.9□□□□□ -1.79
TRIM39-206ENST00000420746 LINC00575Q6W349 94 aa3.9□□□□□ -1.79
TRIM39-206ENST00000420746 A6NDN8 102 aa3.89□□□□□ -1.79
TRIM39-206ENST00000420746 E9PLD3 99 aa3.89□□□□□ -1.79
TRIM39-206ENST00000420746 H3BUT2 72 aa3.89□□□□□ -1.79
TRIM39-206ENST00000420746 DPM2O94777 84 aa3.89□□□□□ -1.79
TRIM39-206ENST00000420746 LOC105371267A0A1B0GV96 52 aa3.88□□□□□ -1.79
TRIM39-206ENST00000420746 hADV29S1A0JD25 119 aa3.88□□□□□ -1.79
TRIM39-206ENST00000420746 SERF1AO75920 110 aa3.88□□□□□ -1.79
TRIM39-206ENST00000420746 IGKCP01834 107 aa3.88□□□□□ -1.79
TRIM39-206ENST00000420746 KRTAP4-2Q9BYR5 136 aa3.88□□□□□ -1.79
TRIM39-206ENST00000420746 H0Y8G0 127 aa3.87□□□□□ -1.79
TRIM39-206ENST00000420746 IGKV4-1P06312 121 aa3.87□□□□□ -1.79
TRIM39-206ENST00000420746 VAMP3Q15836 100 aa3.87□□□□□ -1.79
TRIM39-206ENST00000420746 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.87□□□□□ -1.79
TRIM39-206ENST00000420746 SMIM11BQ8TCY0 68 aa3.87□□□□□ -1.79
TRIM39-206ENST00000420746 SNHG12Q9BXW3 62 aa3.87□□□□□ -1.79
TRIM39-206ENST00000420746 TRAPPC1Q9Y5R8 145 aa3.87□□□□□ -1.79
TRIM39-206ENST00000420746 KRTAP15-1Q3LI76 137 aa3.86□□□□□ -1.79
TRIM39-206ENST00000420746 CLLU1Q5K131 121 aa3.86□□□□□ -1.79
TRIM39-206ENST00000420746 COPS9Q8WXC6 57 aa3.86□□□□□ -1.79
TRIM39-206ENST00000420746 IGHV6-1A0A0B4J1U7 121 aa3.84□□□□□ -1.79
TRIM39-206ENST00000420746 C8orf87E5RJ46 101 aa3.84□□□□□ -1.79
TRIM39-206ENST00000420746 KRTAP5-10Q6L8G5 202 aa3.84□□□□□ -1.79
TRIM39-206ENST00000420746 KRTAP12-2P59991 146 aa3.83□□□□□ -1.8
TRIM39-206ENST00000420746 PRO2289Q9P1D8 64 aa3.83□□□□□ -1.8
TRIM39-206ENST00000420746 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
TRIM39-206ENST00000420746 HSBP1O75506 76 aa3.82□□□□□ -1.8
TRIM39-206ENST00000420746 IFITM1P13164 125 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms