RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 ATP11AUNQ6ZP68 121 aa10.46□□□□□ -0.73
CRTC3-202ENST00000420329 TEP1Q99973 2627 aaKnown RBP10.46□□□□□ -0.74
CRTC3-202ENST00000420329 Q5XG85 94 aa10.46□□□□□ -0.74
CRTC3-202ENST00000420329 SPANXA2-OT1Q8N9U9 137 aa10.45□□□□□ -0.74
CRTC3-202ENST00000420329 NOTCH1P46531 2555 aa10.45□□□□□ -0.74
CRTC3-202ENST00000420329 TYMSOSQ8TAI1 123 aa10.44□□□□□ -0.74
CRTC3-202ENST00000420329 UBR5O95071 2799 aaPredicted RBP10.44□□□□□ -0.74
CRTC3-202ENST00000420329 ITPR1Q14643 2758 aa10.44□□□□□ -0.74
CRTC3-202ENST00000420329 A0A087WTM6 91 aa10.44□□□□□ -0.74
CRTC3-202ENST00000420329 IGLV8-61A0A075B6I0 122 aa10.44□□□□□ -0.74
CRTC3-202ENST00000420329 MYO15AQ9UKN7 3530 aa10.42□□□□□ -0.74
CRTC3-202ENST00000420329 WIPF1O43516 503 aa10.42□□□□□ -0.74
CRTC3-202ENST00000420329 APLNQ9ULZ1 77 aa10.41□□□□□ -0.74
CRTC3-202ENST00000420329 PSORS1C2Q9UIG4 136 aa10.41□□□□□ -0.74
CRTC3-202ENST00000420329 Q96NJ1 140 aa10.4□□□□□ -0.74
CRTC3-202ENST00000420329 SPRR1AP35321 89 aa10.39□□□□□ -0.75
CRTC3-202ENST00000420329 SSBP3-AS1Q7Z2R9 100 aa10.39□□□□□ -0.75
CRTC3-202ENST00000420329 FP248Q71RG6 208 aaPredicted RBP10.38□□□□□ -0.75
CRTC3-202ENST00000420329 USP34Q70CQ2 3546 aa10.38□□□□□ -0.75
CRTC3-202ENST00000420329 ZZEF1O43149 2961 aa10.38□□□□□ -0.75
CRTC3-202ENST00000420329 OXTP01178 125 aa10.36□□□□□ -0.75
CRTC3-202ENST00000420329 FAM229BQ4G0N7 80 aa10.36□□□□□ -0.75
CRTC3-202ENST00000420329 LOC400499M0QZD8 3231 aa10.36□□□□□ -0.75
CRTC3-202ENST00000420329 Q1T7F1 81 aa10.36□□□□□ -0.75
CRTC3-202ENST00000420329 PLA2G1BP04054 148 aaKnown RBP10.34□□□□□ -0.75
CRTC3-202ENST00000420329 KRTAP26-1Q6PEX3 210 aa10.34□□□□□ -0.75
CRTC3-202ENST00000420329 COL6A5A8TX70 2615 aa10.34□□□□□ -0.75
CRTC3-202ENST00000420329 STAB1Q9NY15 2570 aa10.32□□□□□ -0.76
CRTC3-202ENST00000420329 UQCR11O14957 56 aa10.32□□□□□ -0.76
CRTC3-202ENST00000420329 IGLV7-43P04211 117 aa10.32□□□□□ -0.76
CRTC3-202ENST00000420329 ASH1LQ9NR48 2969 aaKnown RBP10.3□□□□□ -0.76
CRTC3-202ENST00000420329 NBEAL1Q6ZS30 2694 aa10.28□□□□□ -0.76
CRTC3-202ENST00000420329 DMXL1Q9Y485 3027 aa10.27□□□□□ -0.77
CRTC3-202ENST00000420329 KTN1-AS1Q86SY8 53 aa10.25□□□□□ -0.77
CRTC3-202ENST00000420329 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.25□□□□□ -0.77
CRTC3-202ENST00000420329 PRR26Q8N8Z3 221 aa10.24□□□□□ -0.77
CRTC3-202ENST00000420329 MIR22HGQ0VDD5 57 aa10.24□□□□□ -0.77
CRTC3-202ENST00000420329 IGLV7-46A0A075B6I9 117 aa10.24□□□□□ -0.77
CRTC3-202ENST00000420329 CD164Q04900 197 aa10.23□□□□□ -0.77
CRTC3-202ENST00000420329 MMP24-AS1A0A0U1RRL7 71 aa10.23□□□□□ -0.77
CRTC3-202ENST00000420329 CDC42SE1Q9NRR8 79 aa10.22□□□□□ -0.77
CRTC3-202ENST00000420329 WWC2-AS2Q96NR7 200 aa10.22□□□□□ -0.77
CRTC3-202ENST00000420329 UTP20O75691 2785 aaKnown RBP10.21□□□□□ -0.78
CRTC3-202ENST00000420329 ZANQ9Y493 2812 aa10.21□□□□□ -0.78
CRTC3-202ENST00000420329 TNRC18O15417 2968 aaPredicted RBP10.2□□□□□ -0.78
CRTC3-202ENST00000420329 TNP2Q05952 138 aa10.19□□□□□ -0.78
CRTC3-202ENST00000420329 LINC00472Q9H8W2 130 aa10.18□□□□□ -0.78
CRTC3-202ENST00000420329 Q8N9P0 234 aaPredicted RBP10.18□□□□□ -0.78
CRTC3-202ENST00000420329 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
CRTC3-202ENST00000420329 SPRR1BP22528 89 aa10.17□□□□□ -0.78
CRTC3-202ENST00000420329 KRTAP1-5Q9BYS1 174 aa10.16□□□□□ -0.78
CRTC3-202ENST00000420329 HRNRQ86YZ3 2850 aaPredicted RBP10.15□□□□□ -0.78
CRTC3-202ENST00000420329 KRTAP4-16G5E9R7 235 aaPredicted RBP10.13□□□□□ -0.79
CRTC3-202ENST00000420329 BAHCC1Q9P281 2608 aa10.12□□□□□ -0.79
CRTC3-202ENST00000420329 Q75L30 129 aa10.12□□□□□ -0.79
CRTC3-202ENST00000420329 C9orf92A6NGG3 77 aa10.11□□□□□ -0.79
CRTC3-202ENST00000420329 Q8N1X5 172 aa10.09□□□□□ -0.79
CRTC3-202ENST00000420329 NSD1Q96L73 2696 aaPredicted RBP10.09□□□□□ -0.79
CRTC3-202ENST00000420329 LCA10Q71F78 164 aa10.08□□□□□ -0.8
CRTC3-202ENST00000420329 HRES1P13985 223 aa10.08□□□□□ -0.8
CRTC3-202ENST00000420329 Q5VV11 94 aa10.07□□□□□ -0.8
CRTC3-202ENST00000420329 ITPR2Q14571 2701 aa10.07□□□□□ -0.8
CRTC3-202ENST00000420329 SMR3BP02814 79 aaPredicted RBP10.06□□□□□ -0.8
CRTC3-202ENST00000420329 LINC01558Q9Y6Z2 57 aa10.06□□□□□ -0.8
CRTC3-202ENST00000420329 WDFY3Q8IZQ1 3526 aa10.04□□□□□ -0.8
CRTC3-202ENST00000420329 CELSR2Q9HCU4 2923 aa10.04□□□□□ -0.8
CRTC3-202ENST00000420329 PLAC8Q9NZF1 115 aa10.03□□□□□ -0.8
CRTC3-202ENST00000420329 APCP25054 2843 aa9.99□□□□□ -0.81
CRTC3-202ENST00000420329 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
CRTC3-202ENST00000420329 ZCCHC13Q8WW36 166 aaKnown RBP9.97□□□□□ -0.81
CRTC3-202ENST00000420329 NIPBLQ6KC79 2804 aaeCLIP9.97□□□□□ -0.81
CRTC3-202ENST00000420329 KRTAP29-1A8MX34 341 aaPredicted RBP9.97□□□□□ -0.81
CRTC3-202ENST00000420329 STAB2Q8WWQ8 2551 aa9.96□□□□□ -0.81
CRTC3-202ENST00000420329 FBN2P35556 2912 aa9.95□□□□□ -0.82
CRTC3-202ENST00000420329 NF1P21359 2839 aa9.95□□□□□ -0.82
CRTC3-202ENST00000420329 Q5W150 140 aa9.92□□□□□ -0.82
CRTC3-202ENST00000420329 PANO1I0J062 215 aa9.92□□□□□ -0.82
CRTC3-202ENST00000420329 RBM12B-AS1Q9P1G2 102 aa9.92□□□□□ -0.82
CRTC3-202ENST00000420329 SPINK7P58062 85 aa9.91□□□□□ -0.82
CRTC3-202ENST00000420329 SPINT4Q6UDR6 99 aa9.9□□□□□ -0.82
CRTC3-202ENST00000420329 KRTAP7-1Q8IUC3 87 aa9.89□□□□□ -0.83
CRTC3-202ENST00000420329 DCHS2Q6V1P9 2916 aa9.89□□□□□ -0.83
CRTC3-202ENST00000420329 DCHS1Q96JQ0 3298 aa9.89□□□□□ -0.83
CRTC3-202ENST00000420329 CRYBG3Q68DQ2 2970 aa9.86□□□□□ -0.83
CRTC3-202ENST00000420329 LINC00483Q53H64 154 aa9.85□□□□□ -0.83
CRTC3-202ENST00000420329 Q6ZR54 194 aa9.84□□□□□ -0.83
CRTC3-202ENST00000420329 KRTAP11-1Q8IUC1 163 aa9.84□□□□□ -0.83
CRTC3-202ENST00000420329 RELNP78509 3460 aa9.82□□□□□ -0.84
CRTC3-202ENST00000420329 LCE6AA0A183 80 aa9.82□□□□□ -0.84
CRTC3-202ENST00000420329 ZFHX4Q86UP3 3567 aa9.81□□□□□ -0.84
CRTC3-202ENST00000420329 PRAC1Q96KF2 57 aa9.8□□□□□ -0.84
CRTC3-202ENST00000420329 A0A0D9SG42 100 aa9.79□□□□□ -0.84
CRTC3-202ENST00000420329 ASPMQ8IZT6 3477 aa9.79□□□□□ -0.84
CRTC3-202ENST00000420329 A0A1B0GU33 70 aa9.78□□□□□ -0.84
CRTC3-202ENST00000420329 CRIPTQ9P021 101 aa9.77□□□□□ -0.85
CRTC3-202ENST00000420329 MXRA5Q9NR99 2828 aa9.77□□□□□ -0.85
CRTC3-202ENST00000420329 A0A087X002 238 aa9.74□□□□□ -0.85
CRTC3-202ENST00000420329 NOTCH2NLQ7Z3S9 236 aa9.74□□□□□ -0.85
CRTC3-202ENST00000420329 DMAC1Q96GE9 116 aa9.74□□□□□ -0.85
CRTC3-202ENST00000420329 LAMA5O15230 3695 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms