RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
VPS45-203ENST00000419023 KRTAP13-1Q8IUC0 172 aa2.86□□□□□ -1.95
VPS45-203ENST00000419023 TSTD3H0UI37 97 aa2.85□□□□□ -1.95
VPS45-203ENST00000419023 ZNF22P17026 224 aaPredicted RBP2.85□□□□□ -1.95
VPS45-203ENST00000419023 MOBPQ13875 183 aa2.85□□□□□ -1.95
VPS45-203ENST00000419023 Q6Q795 121 aa2.85□□□□□ -1.95
VPS45-203ENST00000419023 TTTY13Q9BZ97 58 aa2.85□□□□□ -1.95
VPS45-203ENST00000419023 TMEM126AQ9H061 195 aa2.85□□□□□ -1.95
VPS45-203ENST00000419023 SS18L2Q9UHA2 77 aa2.85□□□□□ -1.95
VPS45-203ENST00000419023 CYSLTR1Q9Y271 337 aa2.85□□□□□ -1.95
VPS45-203ENST00000419023 R4GN34 69 aa2.85□□□□□ -1.95
VPS45-203ENST00000419023 A0A1B0GU33 70 aa2.84□□□□□ -1.95
VPS45-203ENST00000419023 LEPROTO15243 131 aa2.84□□□□□ -1.95
VPS45-203ENST00000419023 PPBPP02775 128 aa2.84□□□□□ -1.95
VPS45-203ENST00000419023 RPS29P62273 56 aaKnown RBP2.84□□□□□ -1.95
VPS45-203ENST00000419023 PCOTHQ58A44 107 aa2.84□□□□□ -1.95
VPS45-203ENST00000419023 SSBP3-AS1Q7Z2R9 100 aa2.84□□□□□ -1.95
VPS45-203ENST00000419023 SPRR4Q96PI1 79 aa2.84□□□□□ -1.95
VPS45-203ENST00000419023 NAT8BQ9UHF3 227 aa2.84□□□□□ -1.95
VPS45-203ENST00000419023 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 HMSDA8MTL9 139 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 D6R8Y8 96 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 S100A12P80511 92 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 C2orf91Q6ZV80 131 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 SMCR5Q8TEV8 140 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 COX7B2Q8TF08 81 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 SMIM7Q9BQ49 75 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 OSTCQ9NRP0 149 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 NAT8Q9UHE5 227 aa2.83□□□□□ -1.96
VPS45-203ENST00000419023 USH2AO75445 5202 aa2.82□□□□□ -1.96
VPS45-203ENST00000419023 M0R378 163 aa2.82□□□□□ -1.96
VPS45-203ENST00000419023 IMUPQ9GZP8 106 aa2.82□□□□□ -1.96
VPS45-203ENST00000419023 CDKN2A-AS1Q9UH64 79 aa2.82□□□□□ -1.96
VPS45-203ENST00000419023 ETDCA0A1B0GVM5 59 aa2.81□□□□□ -1.96
VPS45-203ENST00000419023 PRELID3AQ96N28 172 aa2.81□□□□□ -1.96
VPS45-203ENST00000419023 AMELXQ99217 191 aa2.81□□□□□ -1.96
VPS45-203ENST00000419023 LINC00846Q9NV44 126 aa2.81□□□□□ -1.96
VPS45-203ENST00000419023 H3BRM9 83 aa2.8□□□□□ -1.96
VPS45-203ENST00000419023 H3BT86 120 aa2.8□□□□□ -1.96
VPS45-203ENST00000419023 IGLV6-57P01721 117 aa2.8□□□□□ -1.96
VPS45-203ENST00000419023 LAMTOR2Q9Y2Q5 125 aa2.8□□□□□ -1.96
VPS45-203ENST00000419023 V9GYV3 84 aa2.8□□□□□ -1.96
VPS45-203ENST00000419023 C9orf92A6NGG3 77 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 C11orf86A6NJI1 115 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 K7EMI3 77 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 HRES1P13985 223 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 COX17Q14061 63 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 KRTAP19-2Q3LHN2 52 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 C9orf153Q5TBE3 101 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 MRPL54Q6P161 138 aaKnown RBP2.79□□□□□ -1.96
VPS45-203ENST00000419023 SCGB3A1Q96QR1 104 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 LIMD2Q9BT23 127 aa2.79□□□□□ -1.96
VPS45-203ENST00000419023 SMIM27A0A1W2PRY6 76 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 LINC01549A6NIU2 74 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 SPINK8P0C7L1 97 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 HINT1P49773 126 aaPredicted RBP2.78□□□□□ -1.96
VPS45-203ENST00000419023 ADIRFQ15847 76 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 SFTA2Q6UW10 78 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 IGFL1Q6UW32 110 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 Q8N8P6 123 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 NXT2Q9NPJ8 142 aaKnown RBP2.78□□□□□ -1.96
VPS45-203ENST00000419023 LAMTOR3Q9UHA4 124 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 ERG28Q9UKR5 140 aa2.78□□□□□ -1.96
VPS45-203ENST00000419023 IGIPA6NJ69 53 aa2.77□□□□□ -1.97
VPS45-203ENST00000419023 HIST3H2BBQ8N257 126 aa2.77□□□□□ -1.97
VPS45-203ENST00000419023 LINC00158P58513 81 aa2.76□□□□□ -1.97
VPS45-203ENST00000419023 ALKAL2Q6UX46 152 aa2.76□□□□□ -1.97
VPS45-203ENST00000419023 LCA10Q71F78 164 aa2.76□□□□□ -1.97
VPS45-203ENST00000419023 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
VPS45-203ENST00000419023 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
VPS45-203ENST00000419023 ZNF625Q96I27 306 aaPredicted RBP2.75□□□□□ -1.97
VPS45-203ENST00000419023 H7C2G1 150 aa2.74□□□□□ -1.97
VPS45-203ENST00000419023 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
VPS45-203ENST00000419023 TMEM258P61165 79 aa2.74□□□□□ -1.97
VPS45-203ENST00000419023 NDUFA5Q16718 116 aa2.74□□□□□ -1.97
VPS45-203ENST00000419023 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
VPS45-203ENST00000419023 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
VPS45-203ENST00000419023 HRCT1Q6UXD1 115 aa2.74□□□□□ -1.97
VPS45-203ENST00000419023 KCNQ1DNQ9H478 68 aa2.74□□□□□ -1.97
VPS45-203ENST00000419023 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
VPS45-203ENST00000419023 LOC105371267A0A1B0GV96 52 aa2.73□□□□□ -1.97
VPS45-203ENST00000419023 LINC00587B1AMM8 73 aa2.73□□□□□ -1.97
VPS45-203ENST00000419023 NCR3O14931 201 aa2.73□□□□□ -1.97
VPS45-203ENST00000419023 ZNF73O43830 326 aaPredicted RBP2.73□□□□□ -1.97
VPS45-203ENST00000419023 TCL1BO95988 128 aa2.73□□□□□ -1.97
VPS45-203ENST00000419023 NDUFA6P56556 154 aa2.73□□□□□ -1.97
VPS45-203ENST00000419023 RPL37P61927 97 aaKnown RBP2.73□□□□□ -1.97
VPS45-203ENST00000419023 CST9LQ9H4G1 147 aa2.73□□□□□ -1.97
VPS45-203ENST00000419023 SYNE2Q8WXH0 6885 aaKnown RBP2.73□□□□□ -1.97
VPS45-203ENST00000419023 TRAV7A0A075B6U4 112 aa2.72□□□□□ -1.97
VPS45-203ENST00000419023 TAX1BP3O14907 124 aa2.72□□□□□ -1.97
VPS45-203ENST00000419023 SPRR1AP35321 89 aa2.72□□□□□ -1.97
VPS45-203ENST00000419023 PEA15Q15121 130 aa2.72□□□□□ -1.97
VPS45-203ENST00000419023 MEIG1Q5JSS6 88 aa2.72□□□□□ -1.97
VPS45-203ENST00000419023 KTN1-AS1Q86SY8 53 aa2.72□□□□□ -1.97
VPS45-203ENST00000419023 HIST1H2BLQ99880 126 aa2.72□□□□□ -1.97
VPS45-203ENST00000419023 TRBV20-1A0A075B6N2 111 aa2.71□□□□□ -1.98
VPS45-203ENST00000419023 TRBV10-3A0A0K0K1G6 114 aa2.71□□□□□ -1.98
VPS45-203ENST00000419023 A0A1W2PNM2 257 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms