RNA–Protein interactions for RNA: ENST00000418674.1

PTPRC-207, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-207ENST00000418674 BCORQ6W2J9 1755 aa0.66□□□□□ -2.3
PTPRC-207ENST00000418674 URB2Q14146 1524 aaKnown RBP0.66□□□□□ -2.3
PTPRC-207ENST00000418674 Q8IZM0 81 aa0.66□□□□□ -2.3
PTPRC-207ENST00000418674 C18orf32Q8TCD1 76 aa0.66□□□□□ -2.3
PTPRC-207ENST00000418674 RNF213Q63HN8 5207 aa0.66□□□□□ -2.3
PTPRC-207ENST00000418674 CCDC141Q6ZP82 1450 aa0.66□□□□□ -2.3
PTPRC-207ENST00000418674 DNMBPQ6XZF7 1577 aa0.66□□□□□ -2.3
PTPRC-207ENST00000418674 CEP170BQ9Y4F5 1589 aaPredicted RBP0.66□□□□□ -2.3
PTPRC-207ENST00000418674 WNK1Q9H4A3 2382 aa0.65□□□□□ -2.3
PTPRC-207ENST00000418674 ZC3H13Q5T200 1668 aaKnown RBP0.65□□□□□ -2.3
PTPRC-207ENST00000418674 UGGT2Q9NYU1 1516 aa0.65□□□□□ -2.31
PTPRC-207ENST00000418674 KRTAP5-10Q6L8G5 202 aa0.65□□□□□ -2.31
PTPRC-207ENST00000418674 NCOA2Q15596 1464 aa0.65□□□□□ -2.31
PTPRC-207ENST00000418674 CHD9Q3L8U1 2897 aa0.65□□□□□ -2.31
PTPRC-207ENST00000418674 ACANP16112 2415 aa0.65□□□□□ -2.31
PTPRC-207ENST00000418674 DMDP11532 3685 aa0.65□□□□□ -2.31
PTPRC-207ENST00000418674 DOT1LQ8TEK3 1739 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 LAMA1P25391 3075 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 DEFB121Q5J5C9 76 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 ATP5EP2Q5VTU8 51 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 WFDC9Q8NEX5 89 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 USMG5Q96IX5 58 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 GAFA1Q96PS6 74 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 SMCO4Q9NRQ5 59 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 MAGI3Q5TCQ9 1506 aa0.64□□□□□ -2.31
PTPRC-207ENST00000418674 F8P00451 2351 aa0.63□□□□□ -2.31
PTPRC-207ENST00000418674 PLCH1Q4KWH8 1693 aa0.63□□□□□ -2.31
PTPRC-207ENST00000418674 NWD1Q149M9 1564 aa0.63□□□□□ -2.31
PTPRC-207ENST00000418674 A0A087WXM4 84 aa0.63□□□□□ -2.31
PTPRC-207ENST00000418674 TRAV21A0A0B4J279 112 aa0.63□□□□□ -2.31
PTPRC-207ENST00000418674 CFDP00746 253 aaPredicted RBP0.63□□□□□ -2.31
PTPRC-207ENST00000418674 SMIM13P0DJ93 91 aa0.63□□□□□ -2.31
PTPRC-207ENST00000418674 HMCN2Q8NDA2 5059 aa0.63□□□□□ -2.31
PTPRC-207ENST00000418674 URB1O60287 2271 aaKnown RBP0.63□□□□□ -2.31
PTPRC-207ENST00000418674 USP32Q8NFA0 1604 aa0.63□□□□□ -2.31
PTPRC-207ENST00000418674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.63□□□□□ -2.31
PTPRC-207ENST00000418674 ITSN1Q15811 1721 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 K7EQZ3 153 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 NDUFB1O75438 58 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 COX7BP24311 80 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 DEFA5Q01523 94 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 CRIPTQ9P021 101 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 MADDQ8WXG6 1647 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 PLCE1Q9P212 2302 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 EFCAB6Q5THR3 1501 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 MDN1Q9NU22 5596 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 ADAMTS12P58397 1594 aa0.62□□□□□ -2.31
PTPRC-207ENST00000418674 LAMA5O15230 3695 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 PARP4Q9UKK3 1724 aaKnown RBP0.61□□□□□ -2.31
PTPRC-207ENST00000418674 KIF21BO75037 1637 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 CACNA1HO95180 2353 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 VPS13CQ709C8 3753 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 SPTY2D1-AS1A0A0U1RR47 76 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 PDCD5O14737 125 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 COX6B1P14854 86 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 PRO3102Q9H379 93 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 PREX1Q8TCU6 1659 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 RICTORQ6R327 1708 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 DOPEY2Q9Y3R5 2298 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 RALGAPBQ86X10 1494 aa0.61□□□□□ -2.31
PTPRC-207ENST00000418674 MUC5ACP98088 5654 aa0.6□□□□□ -2.31
PTPRC-207ENST00000418674 SRRM2Q9UQ35 2752 aaKnown RBP0.6□□□□□ -2.31
PTPRC-207ENST00000418674 WIZO95785 1651 aa0.6□□□□□ -2.31
PTPRC-207ENST00000418674 UMAD1C9J7I0 102 aa0.6□□□□□ -2.31
PTPRC-207ENST00000418674 I3L3M4 83 aa0.6□□□□□ -2.31
PTPRC-207ENST00000418674 COX8AP10176 69 aa0.6□□□□□ -2.31
PTPRC-207ENST00000418674 IFI27P40305 119 aaPredicted RBP0.6□□□□□ -2.31
PTPRC-207ENST00000418674 TACC2O95359 2948 aa0.59□□□□□ -2.31
PTPRC-207ENST00000418674 PTPRQQ9UMZ3 2332 aa0.59□□□□□ -2.31
PTPRC-207ENST00000418674 DDX60LQ5H9U9 1706 aaKnown RBP0.59□□□□□ -2.31
PTPRC-207ENST00000418674 FAT3Q8TDW7 4589 aa0.59□□□□□ -2.31
PTPRC-207ENST00000418674 GOLGA4Q13439 2230 aaKnown RBP0.59□□□□□ -2.31
PTPRC-207ENST00000418674 USF3Q68DE3 2245 aa0.59□□□□□ -2.31
PTPRC-207ENST00000418674 RPL38P63173 70 aaKnown RBP0.59□□□□□ -2.31
PTPRC-207ENST00000418674 SPINK6Q6UWN8 80 aa0.59□□□□□ -2.31
PTPRC-207ENST00000418674 KRTAP19-3Q7Z4W3 81 aa0.59□□□□□ -2.31
PTPRC-207ENST00000418674 MROH1Q8NDA8 1641 aa0.59□□□□□ -2.32
PTPRC-207ENST00000418674 DUOX2Q9NRD8 1548 aa0.59□□□□□ -2.32
PTPRC-207ENST00000418674 CLIP1P30622 1438 aa0.58□□□□□ -2.32
PTPRC-207ENST00000418674 AKAP9Q99996 3911 aa0.58□□□□□ -2.32
PTPRC-207ENST00000418674 EIF2AK4Q9P2K8 1649 aaKnown RBP0.58□□□□□ -2.32
PTPRC-207ENST00000418674 CPSF4LA6NMK7 179 aaKnown RBP0.58□□□□□ -2.32
PTPRC-207ENST00000418674 IFI6P09912 130 aa0.58□□□□□ -2.32
PTPRC-207ENST00000418674 Q5VSD8 79 aa0.58□□□□□ -2.32
PTPRC-207ENST00000418674 TNRC6CQ9HCJ0 1690 aaKnown RBP0.58□□□□□ -2.32
PTPRC-207ENST00000418674 CSPG4Q6UVK1 2322 aa0.58□□□□□ -2.32
PTPRC-207ENST00000418674 FRAS1Q86XX4 4008 aa0.57□□□□□ -2.32
PTPRC-207ENST00000418674 NREPQ16612 68 aa0.57□□□□□ -2.32
PTPRC-207ENST00000418674 NRAPQ86VF7 1730 aa0.57□□□□□ -2.32
PTPRC-207ENST00000418674 ABCA9Q8IUA7 1624 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 NBASA2RRP1 2371 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 PRKDCP78527 4128 aaKnown RBP0.56□□□□□ -2.32
PTPRC-207ENST00000418674 CD163L1Q9NR16 1453 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 KMT2AQ03164 3969 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 H3BVH4 76 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 KRTAP2-3P0C7H8 128 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 SPRR1BP22528 89 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 SPRR1AP35321 89 aa0.56□□□□□ -2.32
PTPRC-207ENST00000418674 MRPL34Q9BQ48 92 aaKnown RBP0.56□□□□□ -2.32
PTPRC-207ENST00000418674 KRTAP2-4Q9BYR9 128 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms