RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 BVES-AS1Q5T3Y7 98 aa8.6□□□□□ -1.03
ITGB1-204ENST00000417122 F8WEM9 126 aa8.59□□□□□ -1.03
ITGB1-204ENST00000417122 LCE2AQ5TA79 106 aaPredicted RBP8.58□□□□□ -1.04
ITGB1-204ENST00000417122 VAMP8Q9BV40 100 aa8.58□□□□□ -1.04
ITGB1-204ENST00000417122 HIGD1BQ9P298 99 aa8.58□□□□□ -1.04
ITGB1-204ENST00000417122 CFC1BP0CG36 223 aa8.57□□□□□ -1.04
ITGB1-204ENST00000417122 CFC1P0CG37 223 aa8.57□□□□□ -1.04
ITGB1-204ENST00000417122 C9orf92A6NGG3 77 aa8.56□□□□□ -1.04
ITGB1-204ENST00000417122 C1orf195Q5TG92 126 aa8.56□□□□□ -1.04
ITGB1-204ENST00000417122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.56□□□□□ -1.04
ITGB1-204ENST00000417122 RAB37Q96AX2 223 aa8.56□□□□□ -1.04
ITGB1-204ENST00000417122 KRTAP4-1Q9BYQ7 146 aa8.56□□□□□ -1.04
ITGB1-204ENST00000417122 C2orf91Q6ZV80 131 aa8.54□□□□□ -1.04
ITGB1-204ENST00000417122 IGLV8-61A0A075B6I0 122 aa8.53□□□□□ -1.04
ITGB1-204ENST00000417122 A0A0B4J2C4 111 aa8.53□□□□□ -1.04
ITGB1-204ENST00000417122 TCL1BO95988 128 aa8.53□□□□□ -1.04
ITGB1-204ENST00000417122 Q6JHZ5 121 aa8.53□□□□□ -1.04
ITGB1-204ENST00000417122 PPDPFLQ8WWR9 84 aa8.52□□□□□ -1.05
ITGB1-204ENST00000417122 OCIAD2Q56VL3 154 aa8.51□□□□□ -1.05
ITGB1-204ENST00000417122 IGFL1Q6UW32 110 aa8.51□□□□□ -1.05
ITGB1-204ENST00000417122 CEND1Q8N111 149 aa8.51□□□□□ -1.05
ITGB1-204ENST00000417122 CLEC2BQ92478 149 aa8.51□□□□□ -1.05
ITGB1-204ENST00000417122 SNHG12Q9BXW3 62 aa8.5□□□□□ -1.05
ITGB1-204ENST00000417122 H0YGX0 51 aa8.49□□□□□ -1.05
ITGB1-204ENST00000417122 SNCGO76070 127 aa8.48□□□□□ -1.05
ITGB1-204ENST00000417122 TRBV7-7A0A0K0K1E9 115 aa8.47□□□□□ -1.05
ITGB1-204ENST00000417122 TMEM238LA0A1B0GVL6 79 aa8.47□□□□□ -1.05
ITGB1-204ENST00000417122 A6NJY4 79 aa8.47□□□□□ -1.05
ITGB1-204ENST00000417122 PCOTHQ58A44 107 aa8.46□□□□□ -1.06
ITGB1-204ENST00000417122 FAM218AQ96MZ4 157 aa8.46□□□□□ -1.06
ITGB1-204ENST00000417122 FXYD2P54710 66 aa8.45□□□□□ -1.06
ITGB1-204ENST00000417122 PYY3Q5JQD4 70 aa8.45□□□□□ -1.06
ITGB1-204ENST00000417122 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
ITGB1-204ENST00000417122 H3BUT2 72 aa8.44□□□□□ -1.06
ITGB1-204ENST00000417122 A0A1B0GX51 115 aa8.41□□□□□ -1.06
ITGB1-204ENST00000417122 NDUFV3P56181 108 aaKnown RBP8.4□□□□□ -1.06
ITGB1-204ENST00000417122 GHRHP01286 108 aa8.39□□□□□ -1.07
ITGB1-204ENST00000417122 RPL37P61927 97 aaKnown RBP8.39□□□□□ -1.07
ITGB1-204ENST00000417122 HSD52Q0P140 79 aa8.39□□□□□ -1.07
ITGB1-204ENST00000417122 TMA7Q9Y2S6 64 aaKnown RBP8.39□□□□□ -1.07
ITGB1-204ENST00000417122 TRIAP1O43715 76 aa8.38□□□□□ -1.07
ITGB1-204ENST00000417122 Q6Q795 121 aa8.37□□□□□ -1.07
ITGB1-204ENST00000417122 LST1O00453 97 aa8.36□□□□□ -1.07
ITGB1-204ENST00000417122 FABP2P12104 132 aa8.36□□□□□ -1.07
ITGB1-204ENST00000417122 TEN1Q86WV5 123 aa8.36□□□□□ -1.07
ITGB1-204ENST00000417122 KRTAP9-2Q9BYQ4 174 aa8.36□□□□□ -1.07
ITGB1-204ENST00000417122 H3BMG7 143 aa8.35□□□□□ -1.07
ITGB1-204ENST00000417122 SS18L2Q9UHA2 77 aa8.35□□□□□ -1.07
ITGB1-204ENST00000417122 K7ERJ3 54 aa8.34□□□□□ -1.07
ITGB1-204ENST00000417122 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
ITGB1-204ENST00000417122 PSMB2P49721 201 aa8.33□□□□□ -1.08
ITGB1-204ENST00000417122 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
ITGB1-204ENST00000417122 KRTAP19-2Q3LHN2 52 aa8.32□□□□□ -1.08
ITGB1-204ENST00000417122 DNAL4O96015 105 aa8.31□□□□□ -1.08
ITGB1-204ENST00000417122 COX6CP09669 75 aa8.31□□□□□ -1.08
ITGB1-204ENST00000417122 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
ITGB1-204ENST00000417122 A0A087WSZ3 146 aa8.3□□□□□ -1.08
ITGB1-204ENST00000417122 ORMDL1Q9P0S3 153 aa8.3□□□□□ -1.08
ITGB1-204ENST00000417122 H3BQ85 93 aa8.28□□□□□ -1.08
ITGB1-204ENST00000417122 A0A1W2PNM2 257 aa8.26□□□□□ -1.09
ITGB1-204ENST00000417122 Q75L30 129 aa8.26□□□□□ -1.09
ITGB1-204ENST00000417122 TMEM256-PLSCR3K7ERE1 68 aa8.25□□□□□ -1.09
ITGB1-204ENST00000417122 ANKRD29Q8N6D5 301 aa8.25□□□□□ -1.09
ITGB1-204ENST00000417122 Q96NJ1 140 aa8.25□□□□□ -1.09
ITGB1-204ENST00000417122 A0A1B0GV72 72 aa8.24□□□□□ -1.09
ITGB1-204ENST00000417122 ATP11AUNQ6ZP68 121 aa8.24□□□□□ -1.09
ITGB1-204ENST00000417122 MT1HP80294 61 aa8.23□□□□□ -1.09
ITGB1-204ENST00000417122 TRBV7-4A0A0J9YYF1 115 aa8.21□□□□□ -1.1
ITGB1-204ENST00000417122 TRACP01848 142 aa8.21□□□□□ -1.1
ITGB1-204ENST00000417122 SCGB1C2P0DMR2 95 aa8.21□□□□□ -1.1
ITGB1-204ENST00000417122 UBE2V1Q13404 147 aa8.2□□□□□ -1.1
ITGB1-204ENST00000417122 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
ITGB1-204ENST00000417122 SIGMAR1Q99720 223 aa8.18□□□□□ -1.1
ITGB1-204ENST00000417122 CCKP06307 115 aa8.17□□□□□ -1.1
ITGB1-204ENST00000417122 COX6B2Q6YFQ2 88 aa8.17□□□□□ -1.1
ITGB1-204ENST00000417122 DSCR10P59022 87 aa8.16□□□□□ -1.1
ITGB1-204ENST00000417122 A8MUU9 505 aa8.15□□□□□ -1.1
ITGB1-204ENST00000417122 LCE2BO14633 110 aa8.15□□□□□ -1.1
ITGB1-204ENST00000417122 IGKV4-1P06312 121 aa8.15□□□□□ -1.1
ITGB1-204ENST00000417122 RBM3P98179 157 aaKnown RBP8.13□□□□□ -1.11
ITGB1-204ENST00000417122 M0R143 59 aa8.12□□□□□ -1.11
ITGB1-204ENST00000417122 LINC00313P59037 77 aa8.12□□□□□ -1.11
ITGB1-204ENST00000417122 LINC00472Q9H8W2 130 aa8.12□□□□□ -1.11
ITGB1-204ENST00000417122 BAALC-AS2P0C853 105 aa8.11□□□□□ -1.11
ITGB1-204ENST00000417122 DEFB116Q30KQ4 102 aa8.11□□□□□ -1.11
ITGB1-204ENST00000417122 DSCR8Q96T75 97 aa8.11□□□□□ -1.11
ITGB1-204ENST00000417122 VPS25Q9BRG1 176 aa8.11□□□□□ -1.11
ITGB1-204ENST00000417122 M0R2T5 61 aa8.1□□□□□ -1.11
ITGB1-204ENST00000417122 SMIM6P0DI80 62 aa8.08□□□□□ -1.12
ITGB1-204ENST00000417122 LORP23490 312 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-204ENST00000417122 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
ITGB1-204ENST00000417122 ATXN8Q156A1 80 aa8.07□□□□□ -1.12
ITGB1-204ENST00000417122 NAA38Q9BRA0 125 aaKnown RBP8.07□□□□□ -1.12
ITGB1-204ENST00000417122 KRTAP9-6A0A140TA67 174 aa8.06□□□□□ -1.12
ITGB1-204ENST00000417122 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
ITGB1-204ENST00000417122 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
ITGB1-204ENST00000417122 IGHV6-1A0A0B4J1U7 121 aa8.05□□□□□ -1.12
ITGB1-204ENST00000417122 C9JAW5 83 aa8.05□□□□□ -1.12
ITGB1-204ENST00000417122 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
ITGB1-204ENST00000417122 C21orf62-AS1Q17RA5 79 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms