RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 BCE1O60756 84 aa12.27□□□□□ -0.44
PTPRU-203ENST00000415600 SPRR1AP35321 89 aa12.26□□□□□ -0.45
PTPRU-203ENST00000415600 TMEM256-PLSCR3K7ERE1 68 aa12.25□□□□□ -0.45
PTPRU-203ENST00000415600 KRTAP4-16G5E9R7 235 aaPredicted RBP12.24□□□□□ -0.45
PTPRU-203ENST00000415600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.24□□□□□ -0.45
PTPRU-203ENST00000415600 H3BQ85 93 aa12.22□□□□□ -0.45
PTPRU-203ENST00000415600 VPS25Q9BRG1 176 aa12.22□□□□□ -0.45
PTPRU-203ENST00000415600 Q6ZQY7 126 aa12.22□□□□□ -0.45
PTPRU-203ENST00000415600 OBSCN-AS1Q96MR7 158 aa12.22□□□□□ -0.45
PTPRU-203ENST00000415600 B5MCH6 92 aa12.2□□□□□ -0.46
PTPRU-203ENST00000415600 UBE2AP49459 152 aa12.2□□□□□ -0.46
PTPRU-203ENST00000415600 ETDCA0A1B0GVM5 59 aa12.19□□□□□ -0.46
PTPRU-203ENST00000415600 Q6ZRX8 168 aa12.19□□□□□ -0.46
PTPRU-203ENST00000415600 GHRHP01286 108 aa12.18□□□□□ -0.46
PTPRU-203ENST00000415600 CRYGAP11844 174 aa12.18□□□□□ -0.46
PTPRU-203ENST00000415600 DHRS4-AS1Q9P1J3 65 aa12.17□□□□□ -0.46
PTPRU-203ENST00000415600 JMJD7-PLA2G4BH0Y9G9 81 aa12.16□□□□□ -0.46
PTPRU-203ENST00000415600 PRR4Q16378 134 aa12.14□□□□□ -0.47
PTPRU-203ENST00000415600 FAM240AA0A1B0GVK7 77 aa12.13□□□□□ -0.47
PTPRU-203ENST00000415600 TYMSOSQ8TAI1 123 aa12.13□□□□□ -0.47
PTPRU-203ENST00000415600 Q9BRP9 147 aa12.13□□□□□ -0.47
PTPRU-203ENST00000415600 CDIP1Q9H305 208 aa12.12□□□□□ -0.47
PTPRU-203ENST00000415600 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
PTPRU-203ENST00000415600 RNF213Q63HN8 5207 aa12.09□□□□□ -0.47
PTPRU-203ENST00000415600 ACYP1P07311 99 aa12.09□□□□□ -0.47
PTPRU-203ENST00000415600 FAM229BQ4G0N7 80 aa12.09□□□□□ -0.47
PTPRU-203ENST00000415600 A0A087X002 238 aa12.08□□□□□ -0.48
PTPRU-203ENST00000415600 KRTAP13-1Q8IUC0 172 aa12.08□□□□□ -0.48
PTPRU-203ENST00000415600 LAMTOR3Q9UHA4 124 aa12.08□□□□□ -0.48
PTPRU-203ENST00000415600 FAM19A1Q7Z5A9 133 aa12.07□□□□□ -0.48
PTPRU-203ENST00000415600 A0A1B0GV72 72 aa12.05□□□□□ -0.48
PTPRU-203ENST00000415600 RBM3P98179 157 aaKnown RBP12.05□□□□□ -0.48
PTPRU-203ENST00000415600 SMCR5Q8TEV8 140 aa12.05□□□□□ -0.48
PTPRU-203ENST00000415600 NDUFV3P56181 108 aaKnown RBP12.04□□□□□ -0.48
PTPRU-203ENST00000415600 LINC01547P58512 204 aaPredicted RBP12.04□□□□□ -0.48
PTPRU-203ENST00000415600 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
PTPRU-203ENST00000415600 IGLV5-48A0A075B6I7 105 aa12.03□□□□□ -0.48
PTPRU-203ENST00000415600 PRLHP81277 87 aa12.03□□□□□ -0.48
PTPRU-203ENST00000415600 ERC2-IT1O76042 136 aa12.02□□□□□ -0.49
PTPRU-203ENST00000415600 CCKP06307 115 aa12.02□□□□□ -0.49
PTPRU-203ENST00000415600 Q8N377 158 aa12.02□□□□□ -0.49
PTPRU-203ENST00000415600 LOC110117498A0A087WWA1 95 aa12.01□□□□□ -0.49
PTPRU-203ENST00000415600 SIGMAR1Q99720 223 aa12.01□□□□□ -0.49
PTPRU-203ENST00000415600 ANAPC11Q9NYG5 84 aa12.01□□□□□ -0.49
PTPRU-203ENST00000415600 LPAP08519 4548 aa12□□□□□ -0.49
PTPRU-203ENST00000415600 LINC00304Q8N9R0 145 aa11.99□□□□□ -0.49
PTPRU-203ENST00000415600 ST20-AS1Q8NBB2 130 aa11.99□□□□□ -0.49
PTPRU-203ENST00000415600 DEFB105AQ8NG35 78 aa11.99□□□□□ -0.49
PTPRU-203ENST00000415600 PDE6GP18545 87 aa11.98□□□□□ -0.49
PTPRU-203ENST00000415600 Q6ZQT0 140 aa11.98□□□□□ -0.49
PTPRU-203ENST00000415600 DSCR8Q96T75 97 aa11.98□□□□□ -0.49
PTPRU-203ENST00000415600 TRBV7-4A0A0J9YYF1 115 aa11.96□□□□□ -0.49
PTPRU-203ENST00000415600 KRTAP13-2Q52LG2 175 aa11.96□□□□□ -0.5
PTPRU-203ENST00000415600 HIGD2AQ9BW72 106 aa11.96□□□□□ -0.5
PTPRU-203ENST00000415600 ZNF706Q9Y5V0 76 aaPredicted RBP11.96□□□□□ -0.5
PTPRU-203ENST00000415600 C21orf62-AS1Q17RA5 79 aa11.94□□□□□ -0.5
PTPRU-203ENST00000415600 MT-ATP8P03928 68 aa11.92□□□□□ -0.5
PTPRU-203ENST00000415600 A0A0U1RQV1 116 aa11.9□□□□□ -0.5
PTPRU-203ENST00000415600 LINC00846Q9NV44 126 aa11.9□□□□□ -0.5
PTPRU-203ENST00000415600 C3orf22Q8N5N4 141 aa11.89□□□□□ -0.51
PTPRU-203ENST00000415600 SPAG11AQ6PDA7 123 aa11.88□□□□□ -0.51
PTPRU-203ENST00000415600 LINC00643Q86TS7 51 aa11.88□□□□□ -0.51
PTPRU-203ENST00000415600 SMIM29Q86T20 159 aa11.88□□□□□ -0.51
PTPRU-203ENST00000415600 SPRR1BP22528 89 aa11.87□□□□□ -0.51
PTPRU-203ENST00000415600 C4orf48Q5BLP8 95 aa11.87□□□□□ -0.51
PTPRU-203ENST00000415600 SPRR4Q96PI1 79 aa11.87□□□□□ -0.51
PTPRU-203ENST00000415600 RETNLBQ9BQ08 111 aa11.83□□□□□ -0.52
PTPRU-203ENST00000415600 F8WEM9 126 aa11.81□□□□□ -0.52
PTPRU-203ENST00000415600 IGLV7-46A0A075B6I9 117 aa11.8□□□□□ -0.52
PTPRU-203ENST00000415600 SCGB1A1P11684 91 aa11.8□□□□□ -0.52
PTPRU-203ENST00000415600 IGLV8-61A0A075B6I0 122 aa11.79□□□□□ -0.52
PTPRU-203ENST00000415600 TPRXLQ17RH7 258 aa11.79□□□□□ -0.52
PTPRU-203ENST00000415600 TRBV7-7A0A0K0K1E9 115 aa11.79□□□□□ -0.52
PTPRU-203ENST00000415600 Q6JHZ5 121 aa11.79□□□□□ -0.52
PTPRU-203ENST00000415600 Q6Q795 121 aa11.79□□□□□ -0.52
PTPRU-203ENST00000415600 UBL5Q9BZL1 73 aa11.79□□□□□ -0.52
PTPRU-203ENST00000415600 A0A1B0GW54 56 aa11.76□□□□□ -0.53
PTPRU-203ENST00000415600 IMUPQ9GZP8 106 aa11.75□□□□□ -0.53
PTPRU-203ENST00000415600 Q8NBF4 154 aa11.75□□□□□ -0.53
PTPRU-203ENST00000415600 A0A1W2PNM2 257 aa11.74□□□□□ -0.53
PTPRU-203ENST00000415600 FP248Q71RG6 208 aaPredicted RBP11.74□□□□□ -0.53
PTPRU-203ENST00000415600 LINC00483Q53H64 154 aa11.73□□□□□ -0.53
PTPRU-203ENST00000415600 ATP5EP2Q5VTU8 51 aa11.73□□□□□ -0.53
PTPRU-203ENST00000415600 SPINK1P00995 79 aa11.72□□□□□ -0.53
PTPRU-203ENST00000415600 Q6ZVQ6 151 aa11.72□□□□□ -0.53
PTPRU-203ENST00000415600 IGFL1Q6UW32 110 aa11.71□□□□□ -0.53
PTPRU-203ENST00000415600 MUC2Q02817 5179 aa11.71□□□□□ -0.54
PTPRU-203ENST00000415600 IGKV3D-7A0A0C4DH55 119 aa11.68□□□□□ -0.54
PTPRU-203ENST00000415600 PCP4P48539 62 aa11.67□□□□□ -0.54
PTPRU-203ENST00000415600 SSBP3-AS1Q7Z2R9 100 aa11.67□□□□□ -0.54
PTPRU-203ENST00000415600 IGLV9-49A0A0B4J1Y8 123 aa11.65□□□□□ -0.54
PTPRU-203ENST00000415600 MOBPQ13875 183 aa11.64□□□□□ -0.55
PTPRU-203ENST00000415600 RPS29P62273 56 aaKnown RBP11.63□□□□□ -0.55
PTPRU-203ENST00000415600 A0A0G2JQZ4 141 aa11.62□□□□□ -0.55
PTPRU-203ENST00000415600 CXCL6P80162 114 aa11.62□□□□□ -0.55
PTPRU-203ENST00000415600 NREPQ16612 68 aa11.62□□□□□ -0.55
PTPRU-203ENST00000415600 C9orf153Q5TBE3 101 aa11.58□□□□□ -0.55
PTPRU-203ENST00000415600 HIST1H4AP62805 103 aaKnown RBP11.54□□□□□ -0.56
PTPRU-203ENST00000415600 FAM236AA0A1B0GUQ0 79 aa11.54□□□□□ -0.56
PTPRU-203ENST00000415600 FAM236BA0A1B0GV22 79 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms