RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 SMIM29Q86T20 159 aa8.63□□□□□ -1.03
HMGA1P1-201ENST00000415560 C3orf22Q8N5N4 141 aa8.63□□□□□ -1.03
HMGA1P1-201ENST00000415560 LOC110117498A0A087WWA1 95 aa8.62□□□□□ -1.03
HMGA1P1-201ENST00000415560 PLA2G1BP04054 148 aaKnown RBP8.62□□□□□ -1.03
HMGA1P1-201ENST00000415560 LINC00483Q53H64 154 aa8.62□□□□□ -1.03
HMGA1P1-201ENST00000415560 CCKP06307 115 aa8.6□□□□□ -1.03
HMGA1P1-201ENST00000415560 ACYP1P07311 99 aa8.6□□□□□ -1.03
HMGA1P1-201ENST00000415560 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
HMGA1P1-201ENST00000415560 TRBV7-4A0A0J9YYF1 115 aa8.59□□□□□ -1.03
HMGA1P1-201ENST00000415560 Q6JHZ5 121 aa8.59□□□□□ -1.03
HMGA1P1-201ENST00000415560 IGLV8-61A0A075B6I0 122 aa8.58□□□□□ -1.04
HMGA1P1-201ENST00000415560 Q6ZQT0 140 aa8.58□□□□□ -1.04
HMGA1P1-201ENST00000415560 LRP1BQ9NZR2 4599 aa8.56□□□□□ -1.04
HMGA1P1-201ENST00000415560 IGLV9-49A0A0B4J1Y8 123 aa8.56□□□□□ -1.04
HMGA1P1-201ENST00000415560 C9orf153Q5TBE3 101 aa8.56□□□□□ -1.04
HMGA1P1-201ENST00000415560 VPS25Q9BRG1 176 aa8.56□□□□□ -1.04
HMGA1P1-201ENST00000415560 FAM240AA0A1B0GVK7 77 aa8.55□□□□□ -1.04
HMGA1P1-201ENST00000415560 FAM229BQ4G0N7 80 aa8.55□□□□□ -1.04
HMGA1P1-201ENST00000415560 A0A1B0GW54 56 aa8.54□□□□□ -1.04
HMGA1P1-201ENST00000415560 Q8NBF4 154 aa8.53□□□□□ -1.04
HMGA1P1-201ENST00000415560 ANAPC11Q9NYG5 84 aa8.53□□□□□ -1.04
HMGA1P1-201ENST00000415560 CRYGAP11844 174 aa8.52□□□□□ -1.05
HMGA1P1-201ENST00000415560 IGFL1Q6UW32 110 aa8.52□□□□□ -1.05
HMGA1P1-201ENST00000415560 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
HMGA1P1-201ENST00000415560 KRTAP10-4P60372 401 aaPredicted RBP8.5□□□□□ -1.05
HMGA1P1-201ENST00000415560 MOBPQ13875 183 aa8.5□□□□□ -1.05
HMGA1P1-201ENST00000415560 Q5VSD8 79 aa8.5□□□□□ -1.05
HMGA1P1-201ENST00000415560 PKHD1P08F94 4074 aa8.49□□□□□ -1.05
HMGA1P1-201ENST00000415560 A0A1W2PNM2 257 aa8.47□□□□□ -1.05
HMGA1P1-201ENST00000415560 Q6Q795 121 aa8.47□□□□□ -1.05
HMGA1P1-201ENST00000415560 UBL5Q9BZL1 73 aa8.47□□□□□ -1.05
HMGA1P1-201ENST00000415560 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.06
HMGA1P1-201ENST00000415560 Q8N1X5 172 aa8.46□□□□□ -1.06
HMGA1P1-201ENST00000415560 EPPK1P58107 5090 aaKnown RBP8.46□□□□□ -1.06
HMGA1P1-201ENST00000415560 APOBP04114 4563 aaKnown RBP8.45□□□□□ -1.06
HMGA1P1-201ENST00000415560 LINC00846Q9NV44 126 aa8.44□□□□□ -1.06
HMGA1P1-201ENST00000415560 A0A0G2JQZ4 141 aa8.43□□□□□ -1.06
HMGA1P1-201ENST00000415560 NREPQ16612 68 aa8.43□□□□□ -1.06
HMGA1P1-201ENST00000415560 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
HMGA1P1-201ENST00000415560 A0A087X002 238 aa8.42□□□□□ -1.06
HMGA1P1-201ENST00000415560 CD164Q04900 197 aa8.42□□□□□ -1.06
HMGA1P1-201ENST00000415560 SRRM2Q9UQ35 2752 aaKnown RBP8.41□□□□□ -1.06
HMGA1P1-201ENST00000415560 KRTAP13-2Q52LG2 175 aa8.41□□□□□ -1.06
HMGA1P1-201ENST00000415560 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
HMGA1P1-201ENST00000415560 CDIP1Q9H305 208 aa8.41□□□□□ -1.06
HMGA1P1-201ENST00000415560 LINC00643Q86TS7 51 aa8.4□□□□□ -1.06
HMGA1P1-201ENST00000415560 A0A087WSZ3 146 aa8.39□□□□□ -1.07
HMGA1P1-201ENST00000415560 TRBV7-7A0A0K0K1E9 115 aa8.39□□□□□ -1.07
HMGA1P1-201ENST00000415560 HRCT1Q6UXD1 115 aa8.39□□□□□ -1.07
HMGA1P1-201ENST00000415560 SS18L2Q9UHA2 77 aa8.39□□□□□ -1.07
HMGA1P1-201ENST00000415560 BIRC6Q9NR09 4857 aa8.39□□□□□ -1.07
HMGA1P1-201ENST00000415560 Q6ZVQ6 151 aa8.38□□□□□ -1.07
HMGA1P1-201ENST00000415560 PRR26Q8N8Z3 221 aa8.37□□□□□ -1.07
HMGA1P1-201ENST00000415560 VPS13BQ7Z7G8 4022 aa8.36□□□□□ -1.07
HMGA1P1-201ENST00000415560 ATP5EP2Q5VTU8 51 aa8.35□□□□□ -1.07
HMGA1P1-201ENST00000415560 SPAG11AQ6PDA7 123 aa8.35□□□□□ -1.07
HMGA1P1-201ENST00000415560 SIGMAR1Q99720 223 aa8.35□□□□□ -1.07
HMGA1P1-201ENST00000415560 RYR1P21817 5038 aa8.35□□□□□ -1.07
HMGA1P1-201ENST00000415560 BPY2O14599 106 aa8.32□□□□□ -1.08
HMGA1P1-201ENST00000415560 SPINK1P00995 79 aa8.32□□□□□ -1.08
HMGA1P1-201ENST00000415560 LIMD2Q9BT23 127 aa8.32□□□□□ -1.08
HMGA1P1-201ENST00000415560 LINC00304Q8N9R0 145 aa8.31□□□□□ -1.08
HMGA1P1-201ENST00000415560 CXCL6P80162 114 aa8.3□□□□□ -1.08
HMGA1P1-201ENST00000415560 IGKV3D-7A0A0C4DH55 119 aa8.28□□□□□ -1.08
HMGA1P1-201ENST00000415560 J3KT08 172 aa8.28□□□□□ -1.08
HMGA1P1-201ENST00000415560 MT-ATP8P03928 68 aa8.28□□□□□ -1.08
HMGA1P1-201ENST00000415560 Q5XG85 94 aa8.28□□□□□ -1.08
HMGA1P1-201ENST00000415560 IMUPQ9GZP8 106 aa8.28□□□□□ -1.08
HMGA1P1-201ENST00000415560 RPS29P62273 56 aaKnown RBP8.27□□□□□ -1.09
HMGA1P1-201ENST00000415560 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
HMGA1P1-201ENST00000415560 KRTAP17-1Q9BYP8 105 aa8.27□□□□□ -1.09
HMGA1P1-201ENST00000415560 FAT1Q14517 4588 aa8.27□□□□□ -1.09
HMGA1P1-201ENST00000415560 HSPG2P98160 4391 aa8.25□□□□□ -1.09
HMGA1P1-201ENST00000415560 LINC00472Q9H8W2 130 aa8.25□□□□□ -1.09
HMGA1P1-201ENST00000415560 KIAA1109Q2LD37 5005 aa8.25□□□□□ -1.09
HMGA1P1-201ENST00000415560 KRTAP10-8P60410 259 aa8.24□□□□□ -1.09
HMGA1P1-201ENST00000415560 OXTP01178 125 aa8.23□□□□□ -1.09
HMGA1P1-201ENST00000415560 HIST1H4AP62805 103 aaKnown RBP8.23□□□□□ -1.09
HMGA1P1-201ENST00000415560 PKHD1L1Q86WI1 4243 aa8.22□□□□□ -1.09
HMGA1P1-201ENST00000415560 NDUFB1O75438 58 aa8.22□□□□□ -1.09
HMGA1P1-201ENST00000415560 IGKV4-1P06312 121 aa8.22□□□□□ -1.09
HMGA1P1-201ENST00000415560 DEFB116Q30KQ4 102 aa8.22□□□□□ -1.09
HMGA1P1-201ENST00000415560 Q96NJ1 140 aa8.19□□□□□ -1.1
HMGA1P1-201ENST00000415560 DSCR10P59022 87 aa8.18□□□□□ -1.1
HMGA1P1-201ENST00000415560 A8MWP4 228 aa8.17□□□□□ -1.1
HMGA1P1-201ENST00000415560 C1orf195Q5TG92 126 aa8.16□□□□□ -1.1
HMGA1P1-201ENST00000415560 PRR15Q8IV56 129 aa8.14□□□□□ -1.11
HMGA1P1-201ENST00000415560 KRTAP4-5Q9BYR2 181 aa8.14□□□□□ -1.11
HMGA1P1-201ENST00000415560 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
HMGA1P1-201ENST00000415560 K7EQZ3 153 aa8.13□□□□□ -1.11
HMGA1P1-201ENST00000415560 SCGB1A1P11684 91 aa8.13□□□□□ -1.11
HMGA1P1-201ENST00000415560 Q8N9L7 120 aa8.13□□□□□ -1.11
HMGA1P1-201ENST00000415560 A0A087WVE0 104 aa8.11□□□□□ -1.11
HMGA1P1-201ENST00000415560 A0A1B0GVX0 72 aa8.11□□□□□ -1.11
HMGA1P1-201ENST00000415560 HERC2O95714 4834 aa8.09□□□□□ -1.11
HMGA1P1-201ENST00000415560 MT1HL1P0DM35 61 aa8.09□□□□□ -1.11
HMGA1P1-201ENST00000415560 IGHV6-1A0A0B4J1U7 121 aa8.08□□□□□ -1.12
HMGA1P1-201ENST00000415560 FAM236AA0A1B0GUQ0 79 aa8.07□□□□□ -1.12
HMGA1P1-201ENST00000415560 FAM236BA0A1B0GV22 79 aa8.07□□□□□ -1.12
HMGA1P1-201ENST00000415560 HCG22E2RYF7 251 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms