RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 IGFL1Q6UW32 110 aa6.17□□□□□ -1.42
CD44-206ENST00000415148 HUWE1Q7Z6Z7 4374 aaKnown RBP6.17□□□□□ -1.42
CD44-206ENST00000415148 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.16□□□□□ -1.42
CD44-206ENST00000415148 hDV103S1A0JD37 113 aa6.16□□□□□ -1.42
CD44-206ENST00000415148 PRB2P02812 416 aaPredicted RBP6.16□□□□□ -1.42
CD44-206ENST00000415148 PSCAO43653 123 aa6.16□□□□□ -1.42
CD44-206ENST00000415148 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
CD44-206ENST00000415148 A0A096LNI7 61 aa6.15□□□□□ -1.42
CD44-206ENST00000415148 H0Y9J4 135 aa6.15□□□□□ -1.42
CD44-206ENST00000415148 SPRR1BP22528 89 aa6.14□□□□□ -1.43
CD44-206ENST00000415148 C14orf177Q52M58 125 aa6.14□□□□□ -1.43
CD44-206ENST00000415148 COL6A5A8TX70 2615 aa6.14□□□□□ -1.43
CD44-206ENST00000415148 RPL37AP61513 92 aaKnown RBP6.13□□□□□ -1.43
CD44-206ENST00000415148 NDUFB1O75438 58 aa6.13□□□□□ -1.43
CD44-206ENST00000415148 WFDC13Q8IUB5 93 aa6.13□□□□□ -1.43
CD44-206ENST00000415148 K7EIL1 84 aa6.12□□□□□ -1.43
CD44-206ENST00000415148 UBE2AP49459 152 aa6.12□□□□□ -1.43
CD44-206ENST00000415148 PRLHP81277 87 aa6.12□□□□□ -1.43
CD44-206ENST00000415148 CYP4F30PQ9H0H9 118 aa6.11□□□□□ -1.43
CD44-206ENST00000415148 NBEAL1Q6ZS30 2694 aa6.11□□□□□ -1.43
CD44-206ENST00000415148 A0A087WSZ3 146 aa6.11□□□□□ -1.43
CD44-206ENST00000415148 IGKV2-24A0A0C4DH68 120 aa6.11□□□□□ -1.43
CD44-206ENST00000415148 DNAH7Q8WXX0 4024 aa6.11□□□□□ -1.43
CD44-206ENST00000415148 KRTAP11-1Q8IUC1 163 aa6.1□□□□□ -1.43
CD44-206ENST00000415148 COL7A1Q02388 2944 aa6.09□□□□□ -1.43
CD44-206ENST00000415148 PSPHP1O15172 72 aa6.09□□□□□ -1.43
CD44-206ENST00000415148 MP68P56378 58 aa6.09□□□□□ -1.43
CD44-206ENST00000415148 KRTAP1-5Q9BYS1 174 aa6.09□□□□□ -1.43
CD44-206ENST00000415148 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
CD44-206ENST00000415148 H3BPC8 53 aa6.09□□□□□ -1.43
CD44-206ENST00000415148 A8MU10 97 aa6.08□□□□□ -1.44
CD44-206ENST00000415148 Q1T7F1 81 aa6.07□□□□□ -1.44
CD44-206ENST00000415148 PRR15Q8IV56 129 aa6.07□□□□□ -1.44
CD44-206ENST00000415148 PHF5AQ7RTV0 110 aaKnown RBP6.07□□□□□ -1.44
CD44-206ENST00000415148 C9orf163Q8N9P6 203 aa6.07□□□□□ -1.44
CD44-206ENST00000415148 APLNQ9ULZ1 77 aa6.07□□□□□ -1.44
CD44-206ENST00000415148 A8MWP4 228 aa6.06□□□□□ -1.44
CD44-206ENST00000415148 UBE2DNLQ8IWF7 75 aa6.06□□□□□ -1.44
CD44-206ENST00000415148 LINC00472Q9H8W2 130 aa6.06□□□□□ -1.44
CD44-206ENST00000415148 TENM2Q9NT68 2774 aa6.06□□□□□ -1.44
CD44-206ENST00000415148 TRAV22A0A0B4J277 110 aa6.06□□□□□ -1.44
CD44-206ENST00000415148 C1orf195Q5TG92 126 aa6.06□□□□□ -1.44
CD44-206ENST00000415148 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
CD44-206ENST00000415148 B9D2Q9BPU9 175 aa6.06□□□□□ -1.44
CD44-206ENST00000415148 SPANXA2-OT1Q8N9U9 137 aa6.04□□□□□ -1.44
CD44-206ENST00000415148 LINC00208Q96KT6 92 aa6.04□□□□□ -1.44
CD44-206ENST00000415148 CHTF8P0CG12 524 aa6.04□□□□□ -1.44
CD44-206ENST00000415148 A8MUN3 132 aa6.02□□□□□ -1.45
CD44-206ENST00000415148 H0Y9P7 68 aa6.02□□□□□ -1.45
CD44-206ENST00000415148 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
CD44-206ENST00000415148 MDFIQ99750 246 aa6.01□□□□□ -1.45
CD44-206ENST00000415148 V9GYY9 64 aa6.01□□□□□ -1.45
CD44-206ENST00000415148 STAB2Q8WWQ8 2551 aa6.01□□□□□ -1.45
CD44-206ENST00000415148 PLECQ15149 4684 aaKnown RBP5.99□□□□□ -1.45
CD44-206ENST00000415148 NBDYA0A0U1RRE5 68 aa5.98□□□□□ -1.45
CD44-206ENST00000415148 DNHD1Q96M86 4753 aa5.98□□□□□ -1.45
CD44-206ENST00000415148 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
CD44-206ENST00000415148 FRAS1Q86XX4 4008 aa5.97□□□□□ -1.45
CD44-206ENST00000415148 Q5VV11 94 aa5.97□□□□□ -1.45
CD44-206ENST00000415148 Q6ZRN7 208 aaPredicted RBP5.96□□□□□ -1.45
CD44-206ENST00000415148 TP53AIP1Q9HCN2 124 aa5.96□□□□□ -1.45
CD44-206ENST00000415148 PANO1I0J062 215 aa5.96□□□□□ -1.46
CD44-206ENST00000415148 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
CD44-206ENST00000415148 LINC00483Q53H64 154 aa5.96□□□□□ -1.46
CD44-206ENST00000415148 KRTAP21-3Q3LHN1 58 aa5.95□□□□□ -1.46
CD44-206ENST00000415148 DNAH8Q96JB1 4490 aa5.95□□□□□ -1.46
CD44-206ENST00000415148 SPACA4Q8TDM5 124 aa5.95□□□□□ -1.46
CD44-206ENST00000415148 DYNC2H1Q8NCM8 4307 aaKnown RBP5.94□□□□□ -1.46
CD44-206ENST00000415148 NUPR2A6NF83 97 aa5.94□□□□□ -1.46
CD44-206ENST00000415148 MOBPQ13875 183 aa5.94□□□□□ -1.46
CD44-206ENST00000415148 Q96NJ1 140 aa5.94□□□□□ -1.46
CD44-206ENST00000415148 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
CD44-206ENST00000415148 ZNF706Q9Y5V0 76 aaPredicted RBP5.94□□□□□ -1.46
CD44-206ENST00000415148 IGLV7-46A0A075B6I9 117 aa5.93□□□□□ -1.46
CD44-206ENST00000415148 MGAM2Q2M2H8 2515 aa5.93□□□□□ -1.46
CD44-206ENST00000415148 LIMD2Q9BT23 127 aa5.92□□□□□ -1.46
CD44-206ENST00000415148 PCOTHQ58A44 107 aa5.91□□□□□ -1.46
CD44-206ENST00000415148 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
CD44-206ENST00000415148 Q6ZR54 194 aa5.91□□□□□ -1.46
CD44-206ENST00000415148 C8orf17Q9NRJ1 99 aa5.91□□□□□ -1.46
CD44-206ENST00000415148 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.91□□□□□ -1.46
CD44-206ENST00000415148 HECTD4Q9Y4D8 3996 aa5.9□□□□□ -1.46
CD44-206ENST00000415148 PRR15LQ9BU68 103 aa5.9□□□□□ -1.46
CD44-206ENST00000415148 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
CD44-206ENST00000415148 PMAIP1Q13794 54 aa5.89□□□□□ -1.47
CD44-206ENST00000415148 A0A1B0GVX0 72 aa5.88□□□□□ -1.47
CD44-206ENST00000415148 SEC61GP60059 68 aa5.88□□□□□ -1.47
CD44-206ENST00000415148 CD164Q04900 197 aa5.88□□□□□ -1.47
CD44-206ENST00000415148 COA5Q86WW8 74 aa5.88□□□□□ -1.47
CD44-206ENST00000415148 WWC2-AS2Q96NR7 200 aa5.88□□□□□ -1.47
CD44-206ENST00000415148 A0A087WTM6 91 aa5.88□□□□□ -1.47
CD44-206ENST00000415148 IGLV5-52A0A0A0MRZ9 124 aa5.87□□□□□ -1.47
CD44-206ENST00000415148 CDK2AP2O75956 126 aa5.87□□□□□ -1.47
CD44-206ENST00000415148 LCA10Q71F78 164 aa5.87□□□□□ -1.47
CD44-206ENST00000415148 A0A087X002 238 aa5.86□□□□□ -1.47
CD44-206ENST00000415148 NOTCH2NLQ7Z3S9 236 aa5.86□□□□□ -1.47
CD44-206ENST00000415148 PLAC8Q9NZF1 115 aa5.86□□□□□ -1.47
CD44-206ENST00000415148 DNAH17Q9UFH2 4485 aa5.86□□□□□ -1.47
CD44-206ENST00000415148 ZNF861PO60384 105 aa5.86□□□□□ -1.47
CD44-206ENST00000415148 ANAPC11Q9NYG5 84 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms