RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 LINC00336Q6ZUF6 198 aa11.92□□□□□ -0.5
TNFRSF8-202ENST00000413146 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.91□□□□□ -0.5
TNFRSF8-202ENST00000413146 ZCCHC13Q8WW36 166 aaKnown RBP11.91□□□□□ -0.5
TNFRSF8-202ENST00000413146 UBE2DNLQ8IWF7 75 aa11.9□□□□□ -0.5
TNFRSF8-202ENST00000413146 COL6A5A8TX70 2615 aa11.9□□□□□ -0.5
TNFRSF8-202ENST00000413146 MDFIQ99750 246 aa11.9□□□□□ -0.51
TNFRSF8-202ENST00000413146 NBEAL1Q6ZS30 2694 aa11.88□□□□□ -0.51
TNFRSF8-202ENST00000413146 C14orf177Q52M58 125 aa11.88□□□□□ -0.51
TNFRSF8-202ENST00000413146 WFDC13Q8IUB5 93 aa11.87□□□□□ -0.51
TNFRSF8-202ENST00000413146 MPLKIPQ8TAP9 179 aa11.87□□□□□ -0.51
TNFRSF8-202ENST00000413146 PHF5AQ7RTV0 110 aaKnown RBP11.87□□□□□ -0.51
TNFRSF8-202ENST00000413146 CHTF8P0CG12 524 aa11.86□□□□□ -0.51
TNFRSF8-202ENST00000413146 PRO0628Q9UI54 55 aa11.86□□□□□ -0.51
TNFRSF8-202ENST00000413146 DNAH10Q8IVF4 4471 aa11.86□□□□□ -0.51
TNFRSF8-202ENST00000413146 KRTAP11-1Q8IUC1 163 aa11.84□□□□□ -0.51
TNFRSF8-202ENST00000413146 H0Y9J4 135 aa11.83□□□□□ -0.52
TNFRSF8-202ENST00000413146 V9GYY9 64 aa11.83□□□□□ -0.52
TNFRSF8-202ENST00000413146 hDV103S1A0JD37 113 aa11.83□□□□□ -0.52
TNFRSF8-202ENST00000413146 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
TNFRSF8-202ENST00000413146 SPRR1BP22528 89 aa11.82□□□□□ -0.52
TNFRSF8-202ENST00000413146 APLNQ9ULZ1 77 aa11.8□□□□□ -0.52
TNFRSF8-202ENST00000413146 MP68P56378 58 aa11.79□□□□□ -0.52
TNFRSF8-202ENST00000413146 C1orf64Q8NEQ6 169 aa11.79□□□□□ -0.52
TNFRSF8-202ENST00000413146 DNAH9Q9NYC9 4486 aa11.78□□□□□ -0.52
TNFRSF8-202ENST00000413146 NDUFB1O75438 58 aa11.78□□□□□ -0.52
TNFRSF8-202ENST00000413146 LYSTQ99698 3801 aa11.78□□□□□ -0.52
TNFRSF8-202ENST00000413146 B9D2Q9BPU9 175 aa11.77□□□□□ -0.52
TNFRSF8-202ENST00000413146 KRTAP29-1A8MX34 341 aaPredicted RBP11.76□□□□□ -0.53
TNFRSF8-202ENST00000413146 C9orf163Q8N9P6 203 aa11.76□□□□□ -0.53
TNFRSF8-202ENST00000413146 PKIGQ9Y2B9 76 aa11.76□□□□□ -0.53
TNFRSF8-202ENST00000413146 CASC2Q6XLA1 102 aa11.76□□□□□ -0.53
TNFRSF8-202ENST00000413146 PRR15Q8IV56 129 aa11.75□□□□□ -0.53
TNFRSF8-202ENST00000413146 BRK1Q8WUW1 75 aa11.74□□□□□ -0.53
TNFRSF8-202ENST00000413146 CYP4F30PQ9H0H9 118 aa11.74□□□□□ -0.53
TNFRSF8-202ENST00000413146 A8MWP4 228 aa11.74□□□□□ -0.53
TNFRSF8-202ENST00000413146 PRR4Q16378 134 aa11.73□□□□□ -0.53
TNFRSF8-202ENST00000413146 LRCOL1A6NCL2 159 aa11.72□□□□□ -0.53
TNFRSF8-202ENST00000413146 LINC00208Q96KT6 92 aa11.72□□□□□ -0.53
TNFRSF8-202ENST00000413146 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
TNFRSF8-202ENST00000413146 TRAV22A0A0B4J277 110 aa11.71□□□□□ -0.53
TNFRSF8-202ENST00000413146 STAB2Q8WWQ8 2551 aa11.7□□□□□ -0.54
TNFRSF8-202ENST00000413146 H0Y9P7 68 aa11.69□□□□□ -0.54
TNFRSF8-202ENST00000413146 COL7A1Q02388 2944 aa11.68□□□□□ -0.54
TNFRSF8-202ENST00000413146 SRRM2Q9UQ35 2752 aaKnown RBP11.67□□□□□ -0.54
TNFRSF8-202ENST00000413146 NBDYA0A0U1RRE5 68 aa11.67□□□□□ -0.54
TNFRSF8-202ENST00000413146 H3BPC8 53 aa11.67□□□□□ -0.54
TNFRSF8-202ENST00000413146 Q1T7F1 81 aa11.66□□□□□ -0.54
TNFRSF8-202ENST00000413146 PANO1I0J062 215 aa11.65□□□□□ -0.54
TNFRSF8-202ENST00000413146 KRTAP13-1Q8IUC0 172 aa11.65□□□□□ -0.54
TNFRSF8-202ENST00000413146 MGAM2Q2M2H8 2515 aa11.65□□□□□ -0.55
TNFRSF8-202ENST00000413146 Q6ZRN7 208 aaPredicted RBP11.61□□□□□ -0.55
TNFRSF8-202ENST00000413146 IGLV9-49A0A0B4J1Y8 123 aa11.6□□□□□ -0.55
TNFRSF8-202ENST00000413146 MMP24-AS1A0A0U1RRL7 71 aa11.6□□□□□ -0.55
TNFRSF8-202ENST00000413146 SPANXA2-OT1Q8N9U9 137 aa11.6□□□□□ -0.55
TNFRSF8-202ENST00000413146 DYNC2H1Q8NCM8 4307 aaKnown RBP11.58□□□□□ -0.56
TNFRSF8-202ENST00000413146 SPACA4Q8TDM5 124 aa11.57□□□□□ -0.56
TNFRSF8-202ENST00000413146 NUPR2A6NF83 97 aa11.57□□□□□ -0.56
TNFRSF8-202ENST00000413146 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF8-202ENST00000413146 DNAH7Q8WXX0 4024 aa11.56□□□□□ -0.56
TNFRSF8-202ENST00000413146 TENM2Q9NT68 2774 aa11.53□□□□□ -0.56
TNFRSF8-202ENST00000413146 PSPHP1O15172 72 aa11.53□□□□□ -0.56
TNFRSF8-202ENST00000413146 Q96NJ1 140 aa11.53□□□□□ -0.56
TNFRSF8-202ENST00000413146 KRTAP21-3Q3LHN1 58 aa11.52□□□□□ -0.57
TNFRSF8-202ENST00000413146 CSMD3Q7Z407 3707 aa11.52□□□□□ -0.57
TNFRSF8-202ENST00000413146 LINC00483Q53H64 154 aa11.51□□□□□ -0.57
TNFRSF8-202ENST00000413146 MOBPQ13875 183 aa11.5□□□□□ -0.57
TNFRSF8-202ENST00000413146 ZNF706Q9Y5V0 76 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF8-202ENST00000413146 PLECQ15149 4684 aaKnown RBP11.49□□□□□ -0.57
TNFRSF8-202ENST00000413146 TP53AIP1Q9HCN2 124 aa11.47□□□□□ -0.57
TNFRSF8-202ENST00000413146 A0A087WTM6 91 aa11.46□□□□□ -0.57
TNFRSF8-202ENST00000413146 C8orf17Q9NRJ1 99 aa11.46□□□□□ -0.57
TNFRSF8-202ENST00000413146 ASB16-AS1Q495Z4 193 aa11.46□□□□□ -0.58
TNFRSF8-202ENST00000413146 A8MUN3 132 aa11.43□□□□□ -0.58
TNFRSF8-202ENST00000413146 WWC2-AS2Q96NR7 200 aa11.43□□□□□ -0.58
TNFRSF8-202ENST00000413146 PSORS1C2Q9UIG4 136 aa11.43□□□□□ -0.58
TNFRSF8-202ENST00000413146 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
TNFRSF8-202ENST00000413146 IGHV6-1A0A0B4J1U7 121 aa11.42□□□□□ -0.58
TNFRSF8-202ENST00000413146 RTL8CO15255 209 aa11.42□□□□□ -0.58
TNFRSF8-202ENST00000413146 CDK2AP2O75956 126 aa11.42□□□□□ -0.58
TNFRSF8-202ENST00000413146 A0A1B0GVX0 72 aa11.41□□□□□ -0.58
TNFRSF8-202ENST00000413146 C1orf195Q5TG92 126 aa11.41□□□□□ -0.58
TNFRSF8-202ENST00000413146 IGLV7-46A0A075B6I9 117 aa11.41□□□□□ -0.58
TNFRSF8-202ENST00000413146 PCOTHQ58A44 107 aa11.4□□□□□ -0.58
TNFRSF8-202ENST00000413146 NDUFS5O43920 106 aa11.39□□□□□ -0.59
TNFRSF8-202ENST00000413146 Q8N9P0 234 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF8-202ENST00000413146 Q6ZR54 194 aa11.38□□□□□ -0.59
TNFRSF8-202ENST00000413146 ZNF861PO60384 105 aa11.37□□□□□ -0.59
TNFRSF8-202ENST00000413146 COA5Q86WW8 74 aa11.37□□□□□ -0.59
TNFRSF8-202ENST00000413146 LIMD2Q9BT23 127 aa11.37□□□□□ -0.59
TNFRSF8-202ENST00000413146 ANAPC11Q9NYG5 84 aa11.37□□□□□ -0.59
TNFRSF8-202ENST00000413146 PLAC8Q9NZF1 115 aa11.36□□□□□ -0.59
TNFRSF8-202ENST00000413146 Q5VV11 94 aa11.35□□□□□ -0.59
TNFRSF8-202ENST00000413146 CD164Q04900 197 aa11.35□□□□□ -0.59
TNFRSF8-202ENST00000413146 MRPL34Q9BQ48 92 aaKnown RBP11.34□□□□□ -0.59
TNFRSF8-202ENST00000413146 DNHD1Q96M86 4753 aa11.33□□□□□ -0.6
TNFRSF8-202ENST00000413146 VPS13DQ5THJ4 4388 aa11.33□□□□□ -0.6
TNFRSF8-202ENST00000413146 PRR15LQ9BU68 103 aa11.31□□□□□ -0.6
TNFRSF8-202ENST00000413146 STARD9Q9P2P6 4700 aa11.31□□□□□ -0.6
TNFRSF8-202ENST00000413146 H3BS24 57 aa11.28□□□□□ -0.6
TNFRSF8-202ENST00000413146 CHKB-CPT1BH3BT56 60 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms