RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 LINC00526Q96FQ7 95 aa4.28□□□□□ -1.72
LSM8-202ENST00000411938 TRAV23DV6A0A075B6W5 121 aa4.27□□□□□ -1.73
LSM8-202ENST00000411938 LOC110117498A0A087WWA1 95 aa4.27□□□□□ -1.73
LSM8-202ENST00000411938 IGKV3D-7A0A0C4DH55 119 aa4.27□□□□□ -1.73
LSM8-202ENST00000411938 COX7CP15954 63 aa4.27□□□□□ -1.73
LSM8-202ENST00000411938 DIRC1Q969H9 104 aa4.27□□□□□ -1.73
LSM8-202ENST00000411938 C6orf48Q9UBA6 75 aa4.27□□□□□ -1.73
LSM8-202ENST00000411938 hADV29S1A0JD25 119 aa4.26□□□□□ -1.73
LSM8-202ENST00000411938 PSORS1C2Q9UIG4 136 aa4.26□□□□□ -1.73
LSM8-202ENST00000411938 IGKV2-24A0A0C4DH68 120 aa4.25□□□□□ -1.73
LSM8-202ENST00000411938 TRBV10-3A0A0K0K1G6 114 aa4.25□□□□□ -1.73
LSM8-202ENST00000411938 Q6ZQT0 140 aa4.25□□□□□ -1.73
LSM8-202ENST00000411938 C2orf48Q96LS8 159 aa4.25□□□□□ -1.73
LSM8-202ENST00000411938 CAMK2N2Q96S95 79 aa4.25□□□□□ -1.73
LSM8-202ENST00000411938 UBL5Q9BZL1 73 aa4.25□□□□□ -1.73
LSM8-202ENST00000411938 A0A087WVE0 104 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 TRBV7-6A0A0J9YX20 115 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 F8WDY8 70 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 CRYGAP11844 174 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 VPREB1P12018 145 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 PDE6GP18545 87 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 COX7BP24311 80 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 ELOF1P60002 83 aaKnown RBP4.24□□□□□ -1.73
LSM8-202ENST00000411938 RBM3P98179 157 aaKnown RBP4.24□□□□□ -1.73
LSM8-202ENST00000411938 KRTAP26-1Q6PEX3 210 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.24□□□□□ -1.73
LSM8-202ENST00000411938 Q6ZQY7 126 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 Q6ZRP5 223 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 PRR26Q8N8Z3 221 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 C15orf56Q8N910 161 aa4.24□□□□□ -1.73
LSM8-202ENST00000411938 ZNF73O43830 326 aaPredicted RBP4.23□□□□□ -1.73
LSM8-202ENST00000411938 GHRHP01286 108 aa4.23□□□□□ -1.73
LSM8-202ENST00000411938 HIGD2BQ4VC39 106 aa4.23□□□□□ -1.73
LSM8-202ENST00000411938 SERP2Q8N6R1 65 aa4.23□□□□□ -1.73
LSM8-202ENST00000411938 XAGE1AQ9HD64 81 aa4.23□□□□□ -1.73
LSM8-202ENST00000411938 LAMTOR3Q9UHA4 124 aa4.23□□□□□ -1.73
LSM8-202ENST00000411938 NDUFC2-KCTD14E9PQ53 114 aa4.22□□□□□ -1.73
LSM8-202ENST00000411938 M0R378 163 aa4.22□□□□□ -1.73
LSM8-202ENST00000411938 SMIM20Q8N5G0 67 aa4.22□□□□□ -1.73
LSM8-202ENST00000411938 TRBV7-4A0A0J9YYF1 115 aa4.21□□□□□ -1.74
LSM8-202ENST00000411938 TMEM258P61165 79 aa4.21□□□□□ -1.74
LSM8-202ENST00000411938 DSCR8Q96T75 97 aa4.21□□□□□ -1.74
LSM8-202ENST00000411938 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
LSM8-202ENST00000411938 A0A096LNI7 61 aa4.19□□□□□ -1.74
LSM8-202ENST00000411938 J3KT08 172 aa4.19□□□□□ -1.74
LSM8-202ENST00000411938 BCE1O60756 84 aa4.19□□□□□ -1.74
LSM8-202ENST00000411938 CXCL6P80162 114 aa4.19□□□□□ -1.74
LSM8-202ENST00000411938 Q6ZVQ6 151 aa4.19□□□□□ -1.74
LSM8-202ENST00000411938 FAM19A1Q7Z5A9 133 aa4.19□□□□□ -1.74
LSM8-202ENST00000411938 LINC00474Q9P2X8 69 aa4.19□□□□□ -1.74
LSM8-202ENST00000411938 LINC01547P58512 204 aaPredicted RBP4.18□□□□□ -1.74
LSM8-202ENST00000411938 SYCNQ0VAF6 134 aa4.18□□□□□ -1.74
LSM8-202ENST00000411938 NKAPP1Q8N9T2 125 aa4.18□□□□□ -1.74
LSM8-202ENST00000411938 TLX1NBP0CAT3 122 aa4.17□□□□□ -1.74
LSM8-202ENST00000411938 IGLV1-50A0A075B6I6 118 aa4.16□□□□□ -1.74
LSM8-202ENST00000411938 IGLV5-37A0A075B6J1 123 aa4.16□□□□□ -1.74
LSM8-202ENST00000411938 PRYO14603 147 aa4.16□□□□□ -1.74
LSM8-202ENST00000411938 CYSTM1Q9H1C7 97 aa4.16□□□□□ -1.74
LSM8-202ENST00000411938 TRAV7A0A075B6U4 112 aa4.15□□□□□ -1.75
LSM8-202ENST00000411938 C1orf137Q5JT78 98 aa4.15□□□□□ -1.75
LSM8-202ENST00000411938 KCNQ1DNQ9H478 68 aa4.15□□□□□ -1.75
LSM8-202ENST00000411938 PKIGQ9Y2B9 76 aa4.15□□□□□ -1.75
LSM8-202ENST00000411938 LOC107984640A0A0U1RRK4 108 aa4.13□□□□□ -1.75
LSM8-202ENST00000411938 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
LSM8-202ENST00000411938 RPS28P62857 69 aaKnown RBP4.13□□□□□ -1.75
LSM8-202ENST00000411938 Q6ZRX8 168 aa4.13□□□□□ -1.75
LSM8-202ENST00000411938 DHRS4-AS1Q9P1J3 65 aa4.13□□□□□ -1.75
LSM8-202ENST00000411938 FAM236DA0A1B0GTK5 79 aa4.12□□□□□ -1.75
LSM8-202ENST00000411938 H0Y9J4 135 aa4.12□□□□□ -1.75
LSM8-202ENST00000411938 IGLV7-43P04211 117 aa4.12□□□□□ -1.75
LSM8-202ENST00000411938 FAM236CP0DP71 79 aa4.12□□□□□ -1.75
LSM8-202ENST00000411938 SPRR1AP35321 89 aa4.12□□□□□ -1.75
LSM8-202ENST00000411938 C20orf197Q8N268 126 aa4.12□□□□□ -1.75
LSM8-202ENST00000411938 IGLV5-48A0A075B6I7 105 aa4.11□□□□□ -1.75
LSM8-202ENST00000411938 ETDCA0A1B0GVM5 59 aa4.11□□□□□ -1.75
LSM8-202ENST00000411938 A0A1W2PNN7 141 aa4.11□□□□□ -1.75
LSM8-202ENST00000411938 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
LSM8-202ENST00000411938 KLKP1Q107X0 134 aa4.11□□□□□ -1.75
LSM8-202ENST00000411938 A0A1B0GW54 56 aa4.1□□□□□ -1.75
LSM8-202ENST00000411938 IGKV4-1P06312 121 aa4.1□□□□□ -1.75
LSM8-202ENST00000411938 KRTAP1-4P0C5Y4 121 aa4.1□□□□□ -1.75
LSM8-202ENST00000411938 NREPQ16612 68 aa4.1□□□□□ -1.75
LSM8-202ENST00000411938 Q8N377 158 aa4.1□□□□□ -1.75
LSM8-202ENST00000411938 PHF5AQ7RTV0 110 aaKnown RBP4.09□□□□□ -1.75
LSM8-202ENST00000411938 FAM19A5Q7Z5A7 132 aaPredicted RBP4.09□□□□□ -1.75
LSM8-202ENST00000411938 Q9BRP9 147 aa4.09□□□□□ -1.75
LSM8-202ENST00000411938 FAM168BA1KXE4 195 aa4.08□□□□□ -1.76
LSM8-202ENST00000411938 H7BZZ5 65 aa4.08□□□□□ -1.76
LSM8-202ENST00000411938 BPY2O14599 106 aa4.08□□□□□ -1.76
LSM8-202ENST00000411938 NDUFC1O43677 76 aa4.08□□□□□ -1.76
LSM8-202ENST00000411938 ERC2-IT1O76042 136 aa4.08□□□□□ -1.76
LSM8-202ENST00000411938 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
LSM8-202ENST00000411938 MRPL55Q7Z7F7 128 aaKnown RBP4.08□□□□□ -1.76
LSM8-202ENST00000411938 Q8NBF4 154 aa4.08□□□□□ -1.76
LSM8-202ENST00000411938 RPL37AP8A6NKH3 93 aa4.07□□□□□ -1.76
LSM8-202ENST00000411938 KRTAP7-1Q8IUC3 87 aa4.07□□□□□ -1.76
LSM8-202ENST00000411938 DEFB105AQ8NG35 78 aa4.07□□□□□ -1.76
LSM8-202ENST00000411938 RETNLBQ9BQ08 111 aa4.07□□□□□ -1.76
LSM8-202ENST00000411938 A0A1W2PNM2 257 aa4.06□□□□□ -1.76
LSM8-202ENST00000411938 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 690.6 ms