RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 C1orf195Q5TG92 126 aa9.67□□□□□ -0.86
LSM5-204ENST00000409909 PAM16Q9Y3D7 125 aa9.66□□□□□ -0.86
LSM5-204ENST00000409909 SPATA45Q537H7 98 aa9.65□□□□□ -0.86
LSM5-204ENST00000409909 CFC1BP0CG36 223 aa9.64□□□□□ -0.87
LSM5-204ENST00000409909 CFC1P0CG37 223 aa9.64□□□□□ -0.87
LSM5-204ENST00000409909 F8WEM9 126 aa9.63□□□□□ -0.87
LSM5-204ENST00000409909 BVES-AS1Q5T3Y7 98 aa9.63□□□□□ -0.87
LSM5-204ENST00000409909 HIGD1BQ9P298 99 aa9.63□□□□□ -0.87
LSM5-204ENST00000409909 IGLV8-61A0A075B6I0 122 aa9.62□□□□□ -0.87
LSM5-204ENST00000409909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.62□□□□□ -0.87
LSM5-204ENST00000409909 C2orf91Q6ZV80 131 aa9.62□□□□□ -0.87
LSM5-204ENST00000409909 VAMP8Q9BV40 100 aa9.61□□□□□ -0.87
LSM5-204ENST00000409909 OCIAD2Q56VL3 154 aa9.59□□□□□ -0.87
LSM5-204ENST00000409909 IGFL1Q6UW32 110 aa9.59□□□□□ -0.87
LSM5-204ENST00000409909 TCL1BO95988 128 aa9.58□□□□□ -0.88
LSM5-204ENST00000409909 PCOTHQ58A44 107 aa9.58□□□□□ -0.88
LSM5-204ENST00000409909 Q6JHZ5 121 aa9.58□□□□□ -0.88
LSM5-204ENST00000409909 RAB37Q96AX2 223 aa9.58□□□□□ -0.88
LSM5-204ENST00000409909 A0A0B4J2C4 111 aa9.57□□□□□ -0.88
LSM5-204ENST00000409909 CLEC2BQ92478 149 aa9.57□□□□□ -0.88
LSM5-204ENST00000409909 PPDPFLQ8WWR9 84 aa9.56□□□□□ -0.88
LSM5-204ENST00000409909 FAM218AQ96MZ4 157 aa9.55□□□□□ -0.88
LSM5-204ENST00000409909 SNHG12Q9BXW3 62 aa9.55□□□□□ -0.88
LSM5-204ENST00000409909 TRBV7-7A0A0K0K1E9 115 aa9.54□□□□□ -0.88
LSM5-204ENST00000409909 CEND1Q8N111 149 aa9.54□□□□□ -0.88
LSM5-204ENST00000409909 KRTAP9-2Q9BYQ4 174 aa9.53□□□□□ -0.88
LSM5-204ENST00000409909 H0YGX0 51 aa9.52□□□□□ -0.89
LSM5-204ENST00000409909 H3BUT2 72 aa9.52□□□□□ -0.89
LSM5-204ENST00000409909 LCE2CQ5TA81 110 aa9.51□□□□□ -0.89
LSM5-204ENST00000409909 FXYD2P54710 66 aa9.5□□□□□ -0.89
LSM5-204ENST00000409909 KRTAP19-2Q3LHN2 52 aa9.5□□□□□ -0.89
LSM5-204ENST00000409909 PRO1854Q9UHT4 67 aa9.5□□□□□ -0.89
LSM5-204ENST00000409909 PYY3Q5JQD4 70 aa9.49□□□□□ -0.89
LSM5-204ENST00000409909 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
LSM5-204ENST00000409909 TMEM238LA0A1B0GVL6 79 aa9.46□□□□□ -0.9
LSM5-204ENST00000409909 A6NJY4 79 aa9.46□□□□□ -0.9
LSM5-204ENST00000409909 SNCGO76070 127 aa9.46□□□□□ -0.9
LSM5-204ENST00000409909 NDUFV3P56181 108 aaKnown RBP9.45□□□□□ -0.9
LSM5-204ENST00000409909 TRIAP1O43715 76 aa9.43□□□□□ -0.9
LSM5-204ENST00000409909 A0A1B0GX51 115 aa9.42□□□□□ -0.9
LSM5-204ENST00000409909 Q6Q795 121 aa9.41□□□□□ -0.9
LSM5-204ENST00000409909 LST1O00453 97 aa9.4□□□□□ -0.9
LSM5-204ENST00000409909 HSD52Q0P140 79 aa9.4□□□□□ -0.9
LSM5-204ENST00000409909 H3BMG7 143 aa9.39□□□□□ -0.91
LSM5-204ENST00000409909 K7ERJ3 54 aa9.39□□□□□ -0.91
LSM5-204ENST00000409909 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
LSM5-204ENST00000409909 TMA7Q9Y2S6 64 aaKnown RBP9.39□□□□□ -0.91
LSM5-204ENST00000409909 FABP2P12104 132 aa9.38□□□□□ -0.91
LSM5-204ENST00000409909 OBSCN-AS1Q96MR7 158 aa9.38□□□□□ -0.91
LSM5-204ENST00000409909 MT1HP80294 61 aa9.36□□□□□ -0.91
LSM5-204ENST00000409909 GHRHP01286 108 aa9.35□□□□□ -0.91
LSM5-204ENST00000409909 SS18L2Q9UHA2 77 aa9.35□□□□□ -0.91
LSM5-204ENST00000409909 A0A087WSZ3 146 aa9.34□□□□□ -0.91
LSM5-204ENST00000409909 A0A1W2PNM2 257 aa9.33□□□□□ -0.92
LSM5-204ENST00000409909 PSMB2P49721 201 aa9.33□□□□□ -0.92
LSM5-204ENST00000409909 UQCR10Q9UDW1 63 aa9.33□□□□□ -0.92
LSM5-204ENST00000409909 Q75L30 129 aa9.32□□□□□ -0.92
LSM5-204ENST00000409909 Q96NJ1 140 aa9.32□□□□□ -0.92
LSM5-204ENST00000409909 ORMDL1Q9P0S3 153 aa9.3□□□□□ -0.92
LSM5-204ENST00000409909 DNAL4O96015 105 aa9.29□□□□□ -0.92
LSM5-204ENST00000409909 A0A1B0GV72 72 aa9.28□□□□□ -0.92
LSM5-204ENST00000409909 COX6CP09669 75 aa9.28□□□□□ -0.92
LSM5-204ENST00000409909 ATP11AUNQ6ZP68 121 aa9.27□□□□□ -0.93
LSM5-204ENST00000409909 ANKRD29Q8N6D5 301 aa9.26□□□□□ -0.93
LSM5-204ENST00000409909 FLGP20930 4061 aaPredicted RBP9.25□□□□□ -0.93
LSM5-204ENST00000409909 H3BQ85 93 aa9.25□□□□□ -0.93
LSM5-204ENST00000409909 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
LSM5-204ENST00000409909 TRBV7-4A0A0J9YYF1 115 aa9.23□□□□□ -0.93
LSM5-204ENST00000409909 C20orf166-AS1Q96NR2 134 aa9.23□□□□□ -0.93
LSM5-204ENST00000409909 A8MUU9 505 aa9.21□□□□□ -0.94
LSM5-204ENST00000409909 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
LSM5-204ENST00000409909 TRACP01848 142 aa9.2□□□□□ -0.94
LSM5-204ENST00000409909 DSCR10P59022 87 aa9.2□□□□□ -0.94
LSM5-204ENST00000409909 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
LSM5-204ENST00000409909 KRTAP9-6A0A140TA67 174 aa9.19□□□□□ -0.94
LSM5-204ENST00000409909 SCGB1C2P0DMR2 95 aa9.19□□□□□ -0.94
LSM5-204ENST00000409909 SIGMAR1Q99720 223 aa9.19□□□□□ -0.94
LSM5-204ENST00000409909 CCKP06307 115 aa9.18□□□□□ -0.94
LSM5-204ENST00000409909 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
LSM5-204ENST00000409909 IGKV4-1P06312 121 aa9.17□□□□□ -0.94
LSM5-204ENST00000409909 KRTAP10-6P60371 365 aaPredicted RBP9.17□□□□□ -0.94
LSM5-204ENST00000409909 LINC00472Q9H8W2 130 aa9.16□□□□□ -0.94
LSM5-204ENST00000409909 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.94
LSM5-204ENST00000409909 M0R2T5 61 aa9.14□□□□□ -0.95
LSM5-204ENST00000409909 LINC00313P59037 77 aa9.13□□□□□ -0.95
LSM5-204ENST00000409909 NOTCH2NLQ7Z3S9 236 aa9.13□□□□□ -0.95
LSM5-204ENST00000409909 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
LSM5-204ENST00000409909 BAALC-AS2P0C853 105 aa9.11□□□□□ -0.95
LSM5-204ENST00000409909 RBM3P98179 157 aaKnown RBP9.11□□□□□ -0.95
LSM5-204ENST00000409909 VPS25Q9BRG1 176 aa9.09□□□□□ -0.95
LSM5-204ENST00000409909 DSCR8Q96T75 97 aa9.08□□□□□ -0.96
LSM5-204ENST00000409909 NAA38Q9BRA0 125 aaKnown RBP9.08□□□□□ -0.96
LSM5-204ENST00000409909 M0R143 59 aa9.07□□□□□ -0.96
LSM5-204ENST00000409909 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
LSM5-204ENST00000409909 IGHV6-1A0A0B4J1U7 121 aa9.06□□□□□ -0.96
LSM5-204ENST00000409909 C9JAW5 83 aa9.03□□□□□ -0.96
LSM5-204ENST00000409909 SMIM6P0DI80 62 aa9.03□□□□□ -0.96
LSM5-204ENST00000409909 ATXN8Q156A1 80 aa9.02□□□□□ -0.97
LSM5-204ENST00000409909 A0A1B0GVX0 72 aa9□□□□□ -0.97
LSM5-204ENST00000409909 Q6ZQT0 140 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms