RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 TCL1BO95988 128 aa10.66□□□□□ -0.7
TSPAN4-209ENST00000409543 C14orf144Q96I85 54 aa10.66□□□□□ -0.7
TSPAN4-209ENST00000409543 IGLV8-61A0A075B6I0 122 aa10.65□□□□□ -0.7
TSPAN4-209ENST00000409543 Q6JHZ5 121 aa10.65□□□□□ -0.7
TSPAN4-209ENST00000409543 HIGD1BQ9P298 99 aa10.65□□□□□ -0.7
TSPAN4-209ENST00000409543 CFC1BP0CG36 223 aa10.64□□□□□ -0.71
TSPAN4-209ENST00000409543 CFC1P0CG37 223 aa10.64□□□□□ -0.71
TSPAN4-209ENST00000409543 SPATA45Q537H7 98 aa10.64□□□□□ -0.71
TSPAN4-209ENST00000409543 PPDPFLQ8WWR9 84 aa10.64□□□□□ -0.71
TSPAN4-209ENST00000409543 PAM16Q9Y3D7 125 aa10.64□□□□□ -0.71
TSPAN4-209ENST00000409543 OCIAD2Q56VL3 154 aa10.63□□□□□ -0.71
TSPAN4-209ENST00000409543 PCOTHQ58A44 107 aa10.62□□□□□ -0.71
TSPAN4-209ENST00000409543 IGFL1Q6UW32 110 aa10.61□□□□□ -0.71
TSPAN4-209ENST00000409543 CLEC2BQ92478 149 aa10.61□□□□□ -0.71
TSPAN4-209ENST00000409543 RAB37Q96AX2 223 aa10.61□□□□□ -0.71
TSPAN4-209ENST00000409543 VAMP8Q9BV40 100 aa10.61□□□□□ -0.71
TSPAN4-209ENST00000409543 KRTAP9-2Q9BYQ4 174 aa10.6□□□□□ -0.71
TSPAN4-209ENST00000409543 A0A0B4J2C4 111 aa10.59□□□□□ -0.71
TSPAN4-209ENST00000409543 C2orf91Q6ZV80 131 aa10.59□□□□□ -0.71
TSPAN4-209ENST00000409543 SNHG12Q9BXW3 62 aa10.59□□□□□ -0.71
TSPAN4-209ENST00000409543 TRBV7-7A0A0K0K1E9 115 aa10.58□□□□□ -0.72
TSPAN4-209ENST00000409543 H0YGX0 51 aa10.57□□□□□ -0.72
TSPAN4-209ENST00000409543 SNCGO76070 127 aa10.55□□□□□ -0.72
TSPAN4-209ENST00000409543 CEND1Q8N111 149 aa10.53□□□□□ -0.72
TSPAN4-209ENST00000409543 RPL37P61927 97 aaKnown RBP10.52□□□□□ -0.73
TSPAN4-209ENST00000409543 H3BUT2 72 aa10.51□□□□□ -0.73
TSPAN4-209ENST00000409543 LCE2CQ5TA81 110 aa10.51□□□□□ -0.73
TSPAN4-209ENST00000409543 FAM218AQ96MZ4 157 aa10.51□□□□□ -0.73
TSPAN4-209ENST00000409543 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
TSPAN4-209ENST00000409543 TMEM238LA0A1B0GVL6 79 aa10.5□□□□□ -0.73
TSPAN4-209ENST00000409543 A6NJY4 79 aa10.5□□□□□ -0.73
TSPAN4-209ENST00000409543 KRTAP19-2Q3LHN2 52 aa10.49□□□□□ -0.73
TSPAN4-209ENST00000409543 A0A1B0GX51 115 aa10.47□□□□□ -0.73
TSPAN4-209ENST00000409543 NDUFV3P56181 108 aaKnown RBP10.47□□□□□ -0.73
TSPAN4-209ENST00000409543 FXYD2P54710 66 aa10.46□□□□□ -0.73
TSPAN4-209ENST00000409543 Q6Q795 121 aa10.46□□□□□ -0.73
TSPAN4-209ENST00000409543 GHRHP01286 108 aa10.45□□□□□ -0.74
TSPAN4-209ENST00000409543 LST1O00453 97 aa10.44□□□□□ -0.74
TSPAN4-209ENST00000409543 PYY3Q5JQD4 70 aa10.43□□□□□ -0.74
TSPAN4-209ENST00000409543 TEN1Q86WV5 123 aa10.42□□□□□ -0.74
TSPAN4-209ENST00000409543 SS18L2Q9UHA2 77 aa10.42□□□□□ -0.74
TSPAN4-209ENST00000409543 TRIAP1O43715 76 aa10.41□□□□□ -0.74
TSPAN4-209ENST00000409543 H3BMG7 143 aa10.39□□□□□ -0.75
TSPAN4-209ENST00000409543 FABP2P12104 132 aa10.39□□□□□ -0.75
TSPAN4-209ENST00000409543 HSD52Q0P140 79 aa10.39□□□□□ -0.75
TSPAN4-209ENST00000409543 OBSCN-AS1Q96MR7 158 aa10.39□□□□□ -0.75
TSPAN4-209ENST00000409543 MT1HP80294 61 aa10.38□□□□□ -0.75
TSPAN4-209ENST00000409543 Q75L30 129 aa10.35□□□□□ -0.75
TSPAN4-209ENST00000409543 A0A087WSZ3 146 aa10.34□□□□□ -0.75
TSPAN4-209ENST00000409543 PSMB2P49721 201 aa10.33□□□□□ -0.76
TSPAN4-209ENST00000409543 H3BQ85 93 aa10.32□□□□□ -0.76
TSPAN4-209ENST00000409543 K7ERJ3 54 aa10.32□□□□□ -0.76
TSPAN4-209ENST00000409543 DNAL4O96015 105 aa10.32□□□□□ -0.76
TSPAN4-209ENST00000409543 ATP11AUNQ6ZP68 121 aa10.32□□□□□ -0.76
TSPAN4-209ENST00000409543 ORMDL1Q9P0S3 153 aa10.31□□□□□ -0.76
TSPAN4-209ENST00000409543 COX6CP09669 75 aa10.3□□□□□ -0.76
TSPAN4-209ENST00000409543 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
TSPAN4-209ENST00000409543 Q96NJ1 140 aa10.3□□□□□ -0.76
TSPAN4-209ENST00000409543 UQCR10Q9UDW1 63 aa10.3□□□□□ -0.76
TSPAN4-209ENST00000409543 A0A1W2PNM2 257 aa10.29□□□□□ -0.76
TSPAN4-209ENST00000409543 TMA7Q9Y2S6 64 aaKnown RBP10.29□□□□□ -0.76
TSPAN4-209ENST00000409543 ANKRD29Q8N6D5 301 aa10.27□□□□□ -0.77
TSPAN4-209ENST00000409543 TMEM256-PLSCR3K7ERE1 68 aa10.26□□□□□ -0.77
TSPAN4-209ENST00000409543 COX6B2Q6YFQ2 88 aa10.26□□□□□ -0.77
TSPAN4-209ENST00000409543 KRTAP9-6A0A140TA67 174 aa10.25□□□□□ -0.77
TSPAN4-209ENST00000409543 C20orf166-AS1Q96NR2 134 aa10.25□□□□□ -0.77
TSPAN4-209ENST00000409543 TRBV7-4A0A0J9YYF1 115 aa10.24□□□□□ -0.77
TSPAN4-209ENST00000409543 A8MUU9 505 aa10.22□□□□□ -0.77
TSPAN4-209ENST00000409543 A0A1B0GV72 72 aa10.2□□□□□ -0.78
TSPAN4-209ENST00000409543 UBE2V1Q13404 147 aa10.2□□□□□ -0.78
TSPAN4-209ENST00000409543 TRACP01848 142 aa10.19□□□□□ -0.78
TSPAN4-209ENST00000409543 SIGMAR1Q99720 223 aa10.19□□□□□ -0.78
TSPAN4-209ENST00000409543 M0R2T5 61 aa10.18□□□□□ -0.78
TSPAN4-209ENST00000409543 LORP23490 312 aaPredicted RBP10.18□□□□□ -0.78
TSPAN4-209ENST00000409543 KRTAP10-6P60371 365 aaPredicted RBP10.18□□□□□ -0.78
TSPAN4-209ENST00000409543 SCGB1C2P0DMR2 95 aa10.17□□□□□ -0.78
TSPAN4-209ENST00000409543 DSCR10P59022 87 aa10.17□□□□□ -0.78
TSPAN4-209ENST00000409543 CCKP06307 115 aa10.16□□□□□ -0.78
TSPAN4-209ENST00000409543 IGKV4-1P06312 121 aa10.16□□□□□ -0.78
TSPAN4-209ENST00000409543 LINC00313P59037 77 aa10.14□□□□□ -0.79
TSPAN4-209ENST00000409543 FLGP20930 4061 aaPredicted RBP10.13□□□□□ -0.79
TSPAN4-209ENST00000409543 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
TSPAN4-209ENST00000409543 FSIP2Q5CZC0 6907 aa10.11□□□□□ -0.79
TSPAN4-209ENST00000409543 RBM3P98179 157 aaKnown RBP10.1□□□□□ -0.79
TSPAN4-209ENST00000409543 KRTAP16-1A8MUX0 517 aa10.09□□□□□ -0.79
TSPAN4-209ENST00000409543 DEFB116Q30KQ4 102 aa10.09□□□□□ -0.79
TSPAN4-209ENST00000409543 DSCR8Q96T75 97 aa10.08□□□□□ -0.8
TSPAN4-209ENST00000409543 BAALC-AS2P0C853 105 aa10.06□□□□□ -0.8
TSPAN4-209ENST00000409543 NOTCH2NLQ7Z3S9 236 aa10.06□□□□□ -0.8
TSPAN4-209ENST00000409543 VPS25Q9BRG1 176 aa10.06□□□□□ -0.8
TSPAN4-209ENST00000409543 M0R143 59 aa10.04□□□□□ -0.8
TSPAN4-209ENST00000409543 TRBV20-1A0A075B6N2 111 aa10.03□□□□□ -0.8
TSPAN4-209ENST00000409543 CRCT1Q9UGL9 99 aa10.03□□□□□ -0.8
TSPAN4-209ENST00000409543 IGHV6-1A0A0B4J1U7 121 aa10.02□□□□□ -0.81
TSPAN4-209ENST00000409543 C9JAW5 83 aa10.01□□□□□ -0.81
TSPAN4-209ENST00000409543 C21orf62-AS1Q17RA5 79 aa10.01□□□□□ -0.81
TSPAN4-209ENST00000409543 ATXN8Q156A1 80 aa9.99□□□□□ -0.81
TSPAN4-209ENST00000409543 A0A1B0GVX0 72 aa9.98□□□□□ -0.81
TSPAN4-209ENST00000409543 C8orf87E5RJ46 101 aa9.97□□□□□ -0.81
TSPAN4-209ENST00000409543 J3KT08 172 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms