RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 LINC00588Q9Y4M8 146 aa10.4□□□□□ -0.74
LSP1-204ENST00000406638 TNP2Q05952 138 aa10.39□□□□□ -0.75
LSP1-204ENST00000406638 WFDC13Q8IUB5 93 aa10.38□□□□□ -0.75
LSP1-204ENST00000406638 Q6ZRX8 168 aa10.38□□□□□ -0.75
LSP1-204ENST00000406638 A0A1B0GW54 56 aa10.37□□□□□ -0.75
LSP1-204ENST00000406638 Q5VV11 94 aa10.37□□□□□ -0.75
LSP1-204ENST00000406638 SPRR4Q96PI1 79 aa10.37□□□□□ -0.75
LSP1-204ENST00000406638 B9D2Q9BPU9 175 aa10.37□□□□□ -0.75
LSP1-204ENST00000406638 DHRS4-AS1Q9P1J3 65 aa10.37□□□□□ -0.75
LSP1-204ENST00000406638 LINC00208Q96KT6 92 aa10.36□□□□□ -0.75
LSP1-204ENST00000406638 DNAH7Q8WXX0 4024 aa10.35□□□□□ -0.75
LSP1-204ENST00000406638 FAM168BA1KXE4 195 aa10.35□□□□□ -0.75
LSP1-204ENST00000406638 CHKB-CPT1BH3BT56 60 aa10.34□□□□□ -0.75
LSP1-204ENST00000406638 NDUFB1O75438 58 aa10.34□□□□□ -0.75
LSP1-204ENST00000406638 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
LSP1-204ENST00000406638 PLECQ15149 4684 aaKnown RBP10.33□□□□□ -0.76
LSP1-204ENST00000406638 MP68P56378 58 aa10.32□□□□□ -0.76
LSP1-204ENST00000406638 CASC10Q5T4H9 136 aa10.32□□□□□ -0.76
LSP1-204ENST00000406638 LINC01556Q5JQF7 62 aa10.32□□□□□ -0.76
LSP1-204ENST00000406638 KRTAP4-16G5E9R7 235 aaPredicted RBP10.31□□□□□ -0.76
LSP1-204ENST00000406638 DNAH10Q8IVF4 4471 aa10.31□□□□□ -0.76
LSP1-204ENST00000406638 STARD9Q9P2P6 4700 aa10.31□□□□□ -0.76
LSP1-204ENST00000406638 DNAH1Q9P2D7 4330 aa10.31□□□□□ -0.76
LSP1-204ENST00000406638 CD164Q04900 197 aa10.3□□□□□ -0.76
LSP1-204ENST00000406638 SPTSSBQ8NFR3 76 aa10.3□□□□□ -0.76
LSP1-204ENST00000406638 C16orf90A8MZG2 172 aa10.29□□□□□ -0.76
LSP1-204ENST00000406638 RPL37AP61513 92 aaKnown RBP10.29□□□□□ -0.76
LSP1-204ENST00000406638 UBE2BP63146 152 aa10.29□□□□□ -0.76
LSP1-204ENST00000406638 Q8N9P0 234 aaPredicted RBP10.29□□□□□ -0.76
LSP1-204ENST00000406638 IGLV1-50A0A075B6I6 118 aa10.28□□□□□ -0.76
LSP1-204ENST00000406638 LINC00476Q8WZB0 136 aa10.28□□□□□ -0.76
LSP1-204ENST00000406638 PRR15LQ9BU68 103 aa10.28□□□□□ -0.76
LSP1-204ENST00000406638 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
LSP1-204ENST00000406638 FBN3Q75N90 2809 aa10.28□□□□□ -0.76
LSP1-204ENST00000406638 KRTAP1-5Q9BYS1 174 aa10.27□□□□□ -0.77
LSP1-204ENST00000406638 UBE2AP49459 152 aa10.25□□□□□ -0.77
LSP1-204ENST00000406638 TGP01266 2768 aa10.25□□□□□ -0.77
LSP1-204ENST00000406638 SPRR1AP35321 89 aa10.24□□□□□ -0.77
LSP1-204ENST00000406638 APLNQ9ULZ1 77 aa10.24□□□□□ -0.77
LSP1-204ENST00000406638 DYNC2H1Q8NCM8 4307 aaKnown RBP10.24□□□□□ -0.77
LSP1-204ENST00000406638 A0A087WSZ3 146 aa10.23□□□□□ -0.77
LSP1-204ENST00000406638 H0Y9P7 68 aa10.23□□□□□ -0.77
LSP1-204ENST00000406638 IGFL1Q6UW32 110 aa10.23□□□□□ -0.77
LSP1-204ENST00000406638 KRTAP7-1Q8IUC3 87 aa10.23□□□□□ -0.77
LSP1-204ENST00000406638 LIMD2Q9BT23 127 aa10.22□□□□□ -0.77
LSP1-204ENST00000406638 LCA10Q71F78 164 aa10.21□□□□□ -0.78
LSP1-204ENST00000406638 MRPL55Q7Z7F7 128 aaKnown RBP10.21□□□□□ -0.78
LSP1-204ENST00000406638 KTN1-AS1Q86SY8 53 aa10.2□□□□□ -0.78
LSP1-204ENST00000406638 A6NED7 52 aa10.18□□□□□ -0.78
LSP1-204ENST00000406638 KRTAP29-1A8MX34 341 aaPredicted RBP10.18□□□□□ -0.78
LSP1-204ENST00000406638 SPANXA2-OT1Q8N9U9 137 aa10.18□□□□□ -0.78
LSP1-204ENST00000406638 RBM12B-AS1Q9P1G2 102 aa10.18□□□□□ -0.78
LSP1-204ENST00000406638 UBE2DNLQ8IWF7 75 aa10.18□□□□□ -0.78
LSP1-204ENST00000406638 CASC2Q6XLA1 102 aa10.17□□□□□ -0.78
LSP1-204ENST00000406638 PLA2G2DQ9UNK4 145 aa10.17□□□□□ -0.78
LSP1-204ENST00000406638 TLX1NBP0CAT3 122 aa10.14□□□□□ -0.79
LSP1-204ENST00000406638 SRRM2Q9UQ35 2752 aaKnown RBP10.14□□□□□ -0.79
LSP1-204ENST00000406638 REG3GQ6UW15 175 aa10.13□□□□□ -0.79
LSP1-204ENST00000406638 IGLV5-37A0A075B6J1 123 aa10.13□□□□□ -0.79
LSP1-204ENST00000406638 ATP11AUNQ6ZP68 121 aa10.13□□□□□ -0.79
LSP1-204ENST00000406638 CNBPP62633 177 aaKnown RBP10.12□□□□□ -0.79
LSP1-204ENST00000406638 PRLHP81277 87 aa10.12□□□□□ -0.79
LSP1-204ENST00000406638 COA5Q86WW8 74 aa10.12□□□□□ -0.79
LSP1-204ENST00000406638 Q75L30 129 aa10.11□□□□□ -0.79
LSP1-204ENST00000406638 C9orf163Q8N9P6 203 aa10.11□□□□□ -0.79
LSP1-204ENST00000406638 KMT2AQ03164 3969 aa10.11□□□□□ -0.79
LSP1-204ENST00000406638 H3BPC8 53 aa10.09□□□□□ -0.79
LSP1-204ENST00000406638 NUPR2A6NF83 97 aa10.08□□□□□ -0.8
LSP1-204ENST00000406638 VPS13DQ5THJ4 4388 aa10.08□□□□□ -0.8
LSP1-204ENST00000406638 A6NN06 94 aa10.08□□□□□ -0.8
LSP1-204ENST00000406638 LOC101927531A0A1B0GV80 90 aa10.07□□□□□ -0.8
LSP1-204ENST00000406638 PCOTHQ58A44 107 aa10.07□□□□□ -0.8
LSP1-204ENST00000406638 SPAG11AQ6PDA7 123 aa10.05□□□□□ -0.8
LSP1-204ENST00000406638 A8MWP4 228 aa10.03□□□□□ -0.8
LSP1-204ENST00000406638 IGLV7-46A0A075B6I9 117 aa10.03□□□□□ -0.8
LSP1-204ENST00000406638 H0Y9J4 135 aa10.03□□□□□ -0.8
LSP1-204ENST00000406638 NDUFS5O43920 106 aa10.03□□□□□ -0.8
LSP1-204ENST00000406638 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
LSP1-204ENST00000406638 CDC42SE1Q9NRR8 79 aa10.03□□□□□ -0.8
LSP1-204ENST00000406638 PHF5AQ7RTV0 110 aaKnown RBP10.02□□□□□ -0.81
LSP1-204ENST00000406638 IGLV8-61A0A075B6I0 122 aa10.02□□□□□ -0.81
LSP1-204ENST00000406638 A0A096LNI7 61 aa10.02□□□□□ -0.81
LSP1-204ENST00000406638 NBDYA0A0U1RRE5 68 aa10.02□□□□□ -0.81
LSP1-204ENST00000406638 LINC00472Q9H8W2 130 aa10□□□□□ -0.81
LSP1-204ENST00000406638 MOBPQ13875 183 aa10□□□□□ -0.81
LSP1-204ENST00000406638 IGKV2-24A0A0C4DH68 120 aa9.99□□□□□ -0.81
LSP1-204ENST00000406638 DNAH2Q9P225 4427 aa9.98□□□□□ -0.81
LSP1-204ENST00000406638 SPINK7P58062 85 aa9.96□□□□□ -0.81
LSP1-204ENST00000406638 MMP24-AS1A0A0U1RRL7 71 aa9.96□□□□□ -0.82
LSP1-204ENST00000406638 Q6ZRN7 208 aaPredicted RBP9.95□□□□□ -0.82
LSP1-204ENST00000406638 C7orf65Q6ZTY9 151 aa9.94□□□□□ -0.82
LSP1-204ENST00000406638 LINC01558Q9Y6Z2 57 aa9.94□□□□□ -0.82
LSP1-204ENST00000406638 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
LSP1-204ENST00000406638 HYDINQ4G0P3 5121 aa9.91□□□□□ -0.82
LSP1-204ENST00000406638 LY6G6CO95867 125 aa9.91□□□□□ -0.82
LSP1-204ENST00000406638 PLAC8Q9NZF1 115 aa9.9□□□□□ -0.82
LSP1-204ENST00000406638 C4orf48Q5BLP8 95 aa9.9□□□□□ -0.82
LSP1-204ENST00000406638 KRTAP11-1Q8IUC1 163 aa9.9□□□□□ -0.82
LSP1-204ENST00000406638 HRES1P13985 223 aa9.87□□□□□ -0.83
LSP1-204ENST00000406638 PANO1I0J062 215 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms