RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 HELZ2Q9BYK8 2649 aaKnown RBP10.38□□□□□ -0.75
COL4A3BP-204ENST00000405807 Q8NBF4 154 aa10.36□□□□□ -0.75
COL4A3BP-204ENST00000405807 TNP2Q05952 138 aa10.35□□□□□ -0.75
COL4A3BP-204ENST00000405807 LINC01556Q5JQF7 62 aa10.35□□□□□ -0.75
COL4A3BP-204ENST00000405807 PLA2G2DQ9UNK4 145 aa10.35□□□□□ -0.75
COL4A3BP-204ENST00000405807 FASNP49327 2511 aaKnown RBP10.35□□□□□ -0.75
COL4A3BP-204ENST00000405807 COA5Q86WW8 74 aa10.34□□□□□ -0.75
COL4A3BP-204ENST00000405807 RPL37AP8A6NKH3 93 aa10.34□□□□□ -0.75
COL4A3BP-204ENST00000405807 TLX1NBP0CAT3 122 aa10.34□□□□□ -0.75
COL4A3BP-204ENST00000405807 SPAG11AQ6PDA7 123 aa10.34□□□□□ -0.75
COL4A3BP-204ENST00000405807 SPRR4Q96PI1 79 aa10.34□□□□□ -0.75
COL4A3BP-204ENST00000405807 KRTAP4-16G5E9R7 235 aaPredicted RBP10.33□□□□□ -0.76
COL4A3BP-204ENST00000405807 LINC01558Q9Y6Z2 57 aa10.33□□□□□ -0.76
COL4A3BP-204ENST00000405807 IGLV1-50A0A075B6I6 118 aa10.32□□□□□ -0.76
COL4A3BP-204ENST00000405807 SPRR1AP35321 89 aa10.31□□□□□ -0.76
COL4A3BP-204ENST00000405807 DSCR10P59022 87 aa10.3□□□□□ -0.76
COL4A3BP-204ENST00000405807 IGLV5-37A0A075B6J1 123 aa10.3□□□□□ -0.76
COL4A3BP-204ENST00000405807 PLAC8Q9NZF1 115 aa10.29□□□□□ -0.76
COL4A3BP-204ENST00000405807 TRRAPQ9Y4A5 3859 aa10.28□□□□□ -0.76
COL4A3BP-204ENST00000405807 HIVEP1P15822 2718 aa10.28□□□□□ -0.76
COL4A3BP-204ENST00000405807 K7EQZ3 153 aa10.27□□□□□ -0.77
COL4A3BP-204ENST00000405807 FAM168BA1KXE4 195 aa10.27□□□□□ -0.77
COL4A3BP-204ENST00000405807 A0A0A0MQY5 61 aa10.25□□□□□ -0.77
COL4A3BP-204ENST00000405807 DEFB116Q30KQ4 102 aa10.25□□□□□ -0.77
COL4A3BP-204ENST00000405807 UNC79Q9P2D8 2635 aa10.24□□□□□ -0.77
COL4A3BP-204ENST00000405807 DEFB131BA0A096LNP1 70 aa10.24□□□□□ -0.77
COL4A3BP-204ENST00000405807 ASB16-AS1Q495Z4 193 aa10.24□□□□□ -0.77
COL4A3BP-204ENST00000405807 DNAH10OSP0CZ25 163 aa10.23□□□□□ -0.77
COL4A3BP-204ENST00000405807 INAFM1C9JVW0 142 aa10.23□□□□□ -0.77
COL4A3BP-204ENST00000405807 CNBPP62633 177 aaKnown RBP10.22□□□□□ -0.77
COL4A3BP-204ENST00000405807 OTOGQ6ZRI0 2925 aa10.21□□□□□ -0.77
COL4A3BP-204ENST00000405807 CSAG1Q6PB30 78 aa10.21□□□□□ -0.78
COL4A3BP-204ENST00000405807 KRTAP7-1Q8IUC3 87 aa10.21□□□□□ -0.78
COL4A3BP-204ENST00000405807 TENM1Q9UKZ4 2725 aa10.2□□□□□ -0.78
COL4A3BP-204ENST00000405807 RTL8CO15255 209 aa10.2□□□□□ -0.78
COL4A3BP-204ENST00000405807 C1orf134Q5TEV5 83 aa10.18□□□□□ -0.78
COL4A3BP-204ENST00000405807 FLNBO75369 2602 aaKnown RBP10.18□□□□□ -0.78
COL4A3BP-204ENST00000405807 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
COL4A3BP-204ENST00000405807 H0Y9P7 68 aa10.17□□□□□ -0.78
COL4A3BP-204ENST00000405807 WFDC13Q8IUB5 93 aa10.16□□□□□ -0.78
COL4A3BP-204ENST00000405807 C9orf163Q8N9P6 203 aa10.16□□□□□ -0.78
COL4A3BP-204ENST00000405807 IGHV6-1A0A0B4J1U7 121 aa10.15□□□□□ -0.78
COL4A3BP-204ENST00000405807 TEP1Q99973 2627 aaKnown RBP10.15□□□□□ -0.78
COL4A3BP-204ENST00000405807 IGFL1Q6UW32 110 aa10.15□□□□□ -0.78
COL4A3BP-204ENST00000405807 KRTAP10-11P60412 298 aa10.15□□□□□ -0.79
COL4A3BP-204ENST00000405807 CASC10Q5T4H9 136 aa10.15□□□□□ -0.79
COL4A3BP-204ENST00000405807 Q6ZR54 194 aa10.15□□□□□ -0.79
COL4A3BP-204ENST00000405807 ATRQ13535 2644 aa10.14□□□□□ -0.79
COL4A3BP-204ENST00000405807 J3QKU1 62 aa10.14□□□□□ -0.79
COL4A3BP-204ENST00000405807 H3BPC8 53 aa10.13□□□□□ -0.79
COL4A3BP-204ENST00000405807 PKD1L1Q8TDX9 2849 aa10.13□□□□□ -0.79
COL4A3BP-204ENST00000405807 IGLV7-46A0A075B6I9 117 aa10.12□□□□□ -0.79
COL4A3BP-204ENST00000405807 A0A0G2JQZ4 141 aa10.12□□□□□ -0.79
COL4A3BP-204ENST00000405807 A0A1W2PNN7 141 aa10.12□□□□□ -0.79
COL4A3BP-204ENST00000405807 A0A087X002 238 aa10.11□□□□□ -0.79
COL4A3BP-204ENST00000405807 IGLV8-61A0A075B6I0 122 aa10.1□□□□□ -0.79
COL4A3BP-204ENST00000405807 A0A087WSZ3 146 aa10.1□□□□□ -0.79
COL4A3BP-204ENST00000405807 FBN1P35555 2871 aaKnown RBP10.09□□□□□ -0.79
COL4A3BP-204ENST00000405807 KRTAP29-1A8MX34 341 aaPredicted RBP10.05□□□□□ -0.8
COL4A3BP-204ENST00000405807 NSD1Q96L73 2696 aaPredicted RBP10.05□□□□□ -0.8
COL4A3BP-204ENST00000405807 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
COL4A3BP-204ENST00000405807 PRLHP81277 87 aa10.04□□□□□ -0.8
COL4A3BP-204ENST00000405807 ROMO1P60602 79 aa10.04□□□□□ -0.8
COL4A3BP-204ENST00000405807 TENM3Q9P273 2699 aa10□□□□□ -0.81
COL4A3BP-204ENST00000405807 NBEAL1Q6ZS30 2694 aa9.99□□□□□ -0.81
COL4A3BP-204ENST00000405807 PCOTHQ58A44 107 aa9.99□□□□□ -0.81
COL4A3BP-204ENST00000405807 A0A096LNI7 61 aa9.98□□□□□ -0.81
COL4A3BP-204ENST00000405807 IGKV2-24A0A0C4DH68 120 aa9.98□□□□□ -0.81
COL4A3BP-204ENST00000405807 A8MWP4 228 aa9.97□□□□□ -0.81
COL4A3BP-204ENST00000405807 F8P00451 2351 aa9.97□□□□□ -0.81
COL4A3BP-204ENST00000405807 HRES1P13985 223 aa9.95□□□□□ -0.82
COL4A3BP-204ENST00000405807 LINC00472Q9H8W2 130 aa9.95□□□□□ -0.82
COL4A3BP-204ENST00000405807 CSMD3Q7Z407 3707 aa9.95□□□□□ -0.82
COL4A3BP-204ENST00000405807 ANK2Q01484 3957 aa9.95□□□□□ -0.82
COL4A3BP-204ENST00000405807 DNAH1Q9P2D7 4330 aa9.94□□□□□ -0.82
COL4A3BP-204ENST00000405807 SPRR1BP22528 89 aa9.94□□□□□ -0.82
COL4A3BP-204ENST00000405807 NOTCH1P46531 2555 aa9.94□□□□□ -0.82
COL4A3BP-204ENST00000405807 MAST4O15021 2626 aa9.9□□□□□ -0.82
COL4A3BP-204ENST00000405807 MIR22HGQ0VDD5 57 aa9.89□□□□□ -0.83
COL4A3BP-204ENST00000405807 STAB1Q9NY15 2570 aa9.89□□□□□ -0.83
COL4A3BP-204ENST00000405807 SPATA8Q6RVD6 105 aa9.89□□□□□ -0.83
COL4A3BP-204ENST00000405807 KMT2BQ9UMN6 2715 aaPredicted RBP9.87□□□□□ -0.83
COL4A3BP-204ENST00000405807 BAHCC1Q9P281 2608 aa9.87□□□□□ -0.83
COL4A3BP-204ENST00000405807 MMP24-AS1A0A0U1RRL7 71 aa9.85□□□□□ -0.83
COL4A3BP-204ENST00000405807 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
COL4A3BP-204ENST00000405807 C14orf177Q52M58 125 aa9.82□□□□□ -0.84
COL4A3BP-204ENST00000405807 KRTAP1-5Q9BYS1 174 aa9.82□□□□□ -0.84
COL4A3BP-204ENST00000405807 CHTF8P0CG12 524 aa9.81□□□□□ -0.84
COL4A3BP-204ENST00000405807 P0C880 135 aa9.8□□□□□ -0.84
COL4A3BP-204ENST00000405807 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
COL4A3BP-204ENST00000405807 COL6A5A8TX70 2615 aa9.78□□□□□ -0.84
COL4A3BP-204ENST00000405807 CMYA5Q8N3K9 4069 aa9.78□□□□□ -0.84
COL4A3BP-204ENST00000405807 KRTAP24-1Q3LI83 254 aa9.77□□□□□ -0.85
COL4A3BP-204ENST00000405807 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
COL4A3BP-204ENST00000405807 ZNF861PO60384 105 aa9.76□□□□□ -0.85
COL4A3BP-204ENST00000405807 SRRM2Q9UQ35 2752 aaKnown RBP9.74□□□□□ -0.85
COL4A3BP-204ENST00000405807 A0A1B0GU69 56 aa9.73□□□□□ -0.85
COL4A3BP-204ENST00000405807 Q96NJ1 140 aa9.73□□□□□ -0.85
COL4A3BP-204ENST00000405807 KRTAP25-1Q3LHN0 102 aa9.72□□□□□ -0.85
COL4A3BP-204ENST00000405807 UBE2DNLQ8IWF7 75 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms