RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 LINC00208Q96KT6 92 aa9.6□□□□□ -0.87
ATG4B-206ENST00000405546 A0A096LNI7 61 aa9.58□□□□□ -0.88
ATG4B-206ENST00000405546 REG3GQ6UW15 175 aa9.58□□□□□ -0.88
ATG4B-206ENST00000405546 CHTF8P0CG12 524 aa9.56□□□□□ -0.88
ATG4B-206ENST00000405546 CHKB-CPT1BH3BT56 60 aa9.56□□□□□ -0.88
ATG4B-206ENST00000405546 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
ATG4B-206ENST00000405546 KRTAP7-1Q8IUC3 87 aa9.55□□□□□ -0.88
ATG4B-206ENST00000405546 KRTAP1-5Q9BYS1 174 aa9.54□□□□□ -0.88
ATG4B-206ENST00000405546 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
ATG4B-206ENST00000405546 Q8NBF4 154 aa9.53□□□□□ -0.88
ATG4B-206ENST00000405546 HCG22E2RYF7 251 aa9.53□□□□□ -0.88
ATG4B-206ENST00000405546 IGLV5-48A0A075B6I7 105 aa9.52□□□□□ -0.89
ATG4B-206ENST00000405546 Q1T7F1 81 aa9.52□□□□□ -0.89
ATG4B-206ENST00000405546 A0A087WSZ3 146 aa9.51□□□□□ -0.89
ATG4B-206ENST00000405546 PRR15LQ9BU68 103 aa9.51□□□□□ -0.89
ATG4B-206ENST00000405546 COL7A1Q02388 2944 aa9.51□□□□□ -0.89
ATG4B-206ENST00000405546 PHF5AQ7RTV0 110 aaKnown RBP9.5□□□□□ -0.89
ATG4B-206ENST00000405546 ZCCHC13Q8WW36 166 aaKnown RBP9.49□□□□□ -0.89
ATG4B-206ENST00000405546 PLA2G2DQ9UNK4 145 aa9.49□□□□□ -0.89
ATG4B-206ENST00000405546 LINC00476Q8WZB0 136 aa9.48□□□□□ -0.89
ATG4B-206ENST00000405546 KRTAP4-16G5E9R7 235 aaPredicted RBP9.48□□□□□ -0.89
ATG4B-206ENST00000405546 UBE2AP49459 152 aa9.48□□□□□ -0.89
ATG4B-206ENST00000405546 MP68P56378 58 aa9.47□□□□□ -0.89
ATG4B-206ENST00000405546 Q5VV11 94 aa9.47□□□□□ -0.89
ATG4B-206ENST00000405546 B9D2Q9BPU9 175 aa9.47□□□□□ -0.89
ATG4B-206ENST00000405546 SPRR1AP35321 89 aa9.46□□□□□ -0.89
ATG4B-206ENST00000405546 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
ATG4B-206ENST00000405546 IGLV5-37A0A075B6J1 123 aa9.44□□□□□ -0.9
ATG4B-206ENST00000405546 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
ATG4B-206ENST00000405546 H0Y9P7 68 aa9.43□□□□□ -0.9
ATG4B-206ENST00000405546 A6NED7 52 aa9.43□□□□□ -0.9
ATG4B-206ENST00000405546 IGFL1Q6UW32 110 aa9.42□□□□□ -0.9
ATG4B-206ENST00000405546 TNP2Q05952 138 aa9.41□□□□□ -0.9
ATG4B-206ENST00000405546 LCE6AA0A183 80 aa9.41□□□□□ -0.9
ATG4B-206ENST00000405546 LYSTQ99698 3801 aa9.4□□□□□ -0.9
ATG4B-206ENST00000405546 MDFIQ99750 246 aa9.39□□□□□ -0.91
ATG4B-206ENST00000405546 CMYA5Q8N3K9 4069 aa9.39□□□□□ -0.91
ATG4B-206ENST00000405546 C14orf177Q52M58 125 aa9.38□□□□□ -0.91
ATG4B-206ENST00000405546 SPRR4Q96PI1 79 aa9.38□□□□□ -0.91
ATG4B-206ENST00000405546 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
ATG4B-206ENST00000405546 Q8N9P0 234 aaPredicted RBP9.37□□□□□ -0.91
ATG4B-206ENST00000405546 DNAH10Q8IVF4 4471 aa9.37□□□□□ -0.91
ATG4B-206ENST00000405546 KRTAP11-1Q8IUC1 163 aa9.37□□□□□ -0.91
ATG4B-206ENST00000405546 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
ATG4B-206ENST00000405546 H0Y9J4 135 aa9.37□□□□□ -0.91
ATG4B-206ENST00000405546 CASC2Q6XLA1 102 aa9.37□□□□□ -0.91
ATG4B-206ENST00000405546 CYP4F30PQ9H0H9 118 aa9.37□□□□□ -0.91
ATG4B-206ENST00000405546 SPAG11AQ6PDA7 123 aa9.35□□□□□ -0.91
ATG4B-206ENST00000405546 CNBPP62633 177 aaKnown RBP9.34□□□□□ -0.91
ATG4B-206ENST00000405546 LCA10Q71F78 164 aa9.34□□□□□ -0.91
ATG4B-206ENST00000405546 IGLV9-49A0A0B4J1Y8 123 aa9.34□□□□□ -0.91
ATG4B-206ENST00000405546 NDUFB1O75438 58 aa9.34□□□□□ -0.91
ATG4B-206ENST00000405546 NBDYA0A0U1RRE5 68 aa9.32□□□□□ -0.92
ATG4B-206ENST00000405546 PANO1I0J062 215 aa9.31□□□□□ -0.92
ATG4B-206ENST00000405546 RBM12B-AS1Q9P1G2 102 aa9.31□□□□□ -0.92
ATG4B-206ENST00000405546 A0A1B0GW54 56 aa9.3□□□□□ -0.92
ATG4B-206ENST00000405546 COA5Q86WW8 74 aa9.3□□□□□ -0.92
ATG4B-206ENST00000405546 C9orf163Q8N9P6 203 aa9.3□□□□□ -0.92
ATG4B-206ENST00000405546 TGP01266 2768 aa9.3□□□□□ -0.92
ATG4B-206ENST00000405546 CD164Q04900 197 aa9.29□□□□□ -0.92
ATG4B-206ENST00000405546 NDUFS5O43920 106 aa9.27□□□□□ -0.93
ATG4B-206ENST00000405546 LIMD2Q9BT23 127 aa9.25□□□□□ -0.93
ATG4B-206ENST00000405546 NUPR2A6NF83 97 aa9.25□□□□□ -0.93
ATG4B-206ENST00000405546 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
ATG4B-206ENST00000405546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
ATG4B-206ENST00000405546 ANAPC11Q9NYG5 84 aa9.23□□□□□ -0.93
ATG4B-206ENST00000405546 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
ATG4B-206ENST00000405546 DNAH3Q8TD57 4116 aa9.22□□□□□ -0.93
ATG4B-206ENST00000405546 SPINK7P58062 85 aa9.2□□□□□ -0.94
ATG4B-206ENST00000405546 DNAH9Q9NYC9 4486 aa9.19□□□□□ -0.94
ATG4B-206ENST00000405546 A8MWP4 228 aa9.16□□□□□ -0.94
ATG4B-206ENST00000405546 PRAC1Q96KF2 57 aa9.15□□□□□ -0.94
ATG4B-206ENST00000405546 A0A087WTM6 91 aa9.15□□□□□ -0.94
ATG4B-206ENST00000405546 LOC101927531A0A1B0GV80 90 aa9.14□□□□□ -0.95
ATG4B-206ENST00000405546 RTL8CO15255 209 aa9.14□□□□□ -0.95
ATG4B-206ENST00000405546 DNAH7Q8WXX0 4024 aa9.14□□□□□ -0.95
ATG4B-206ENST00000405546 MOBPQ13875 183 aa9.14□□□□□ -0.95
ATG4B-206ENST00000405546 ATP11AUNQ6ZP68 121 aa9.14□□□□□ -0.95
ATG4B-206ENST00000405546 IGLV8-61A0A075B6I0 122 aa9.14□□□□□ -0.95
ATG4B-206ENST00000405546 LY6G6CO95867 125 aa9.14□□□□□ -0.95
ATG4B-206ENST00000405546 SPANXA2-OT1Q8N9U9 137 aa9.14□□□□□ -0.95
ATG4B-206ENST00000405546 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
ATG4B-206ENST00000405546 SPINK6Q6UWN8 80 aa9.13□□□□□ -0.95
ATG4B-206ENST00000405546 CDK2AP2O75956 126 aa9.13□□□□□ -0.95
ATG4B-206ENST00000405546 Q75L30 129 aa9.13□□□□□ -0.95
ATG4B-206ENST00000405546 PRR26Q8N8Z3 221 aa9.13□□□□□ -0.95
ATG4B-206ENST00000405546 A6NN06 94 aa9.12□□□□□ -0.95
ATG4B-206ENST00000405546 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
ATG4B-206ENST00000405546 PLECQ15149 4684 aaKnown RBP9.12□□□□□ -0.95
ATG4B-206ENST00000405546 PSORS1C2Q9UIG4 136 aa9.11□□□□□ -0.95
ATG4B-206ENST00000405546 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
ATG4B-206ENST00000405546 LINC00472Q9H8W2 130 aa9.11□□□□□ -0.95
ATG4B-206ENST00000405546 DNAH1Q9P2D7 4330 aa9.1□□□□□ -0.95
ATG4B-206ENST00000405546 IGLV5-52A0A0A0MRZ9 124 aa9.1□□□□□ -0.95
ATG4B-206ENST00000405546 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
ATG4B-206ENST00000405546 IGLV7-46A0A075B6I9 117 aa9.08□□□□□ -0.96
ATG4B-206ENST00000405546 SPRR1BP22528 89 aa9.08□□□□□ -0.96
ATG4B-206ENST00000405546 ADM2Q7Z4H4 148 aa9.08□□□□□ -0.96
ATG4B-206ENST00000405546 CDC42SE1Q9NRR8 79 aa9.08□□□□□ -0.96
ATG4B-206ENST00000405546 HRES1P13985 223 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms