RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 LINC00483Q53H64 154 aa13.21□□□□□ -0.29
EPCAM-202ENST00000405271 GAGE2AQ6NT46 116 aa13.21□□□□□ -0.29
EPCAM-202ENST00000405271 Q8N377 158 aa13.21□□□□□ -0.29
EPCAM-202ENST00000405271 UBE2V1Q13404 147 aa13.2□□□□□ -0.3
EPCAM-202ENST00000405271 BAALC-AS2P0C853 105 aa13.19□□□□□ -0.3
EPCAM-202ENST00000405271 MTURNQ8N3F0 131 aa13.18□□□□□ -0.3
EPCAM-202ENST00000405271 PRO0461Q9UI25 63 aa13.18□□□□□ -0.3
EPCAM-202ENST00000405271 ANKRD29Q8N6D5 301 aa13.16□□□□□ -0.3
EPCAM-202ENST00000405271 LINC01600Q96MT4 127 aa13.15□□□□□ -0.3
EPCAM-202ENST00000405271 F8W1H4 67 aa13.14□□□□□ -0.31
EPCAM-202ENST00000405271 PKHD1L1Q86WI1 4243 aa13.14□□□□□ -0.31
EPCAM-202ENST00000405271 KRTAP1-4P0C5Y4 121 aa13.13□□□□□ -0.31
EPCAM-202ENST00000405271 FAM229BQ4G0N7 80 aa13.13□□□□□ -0.31
EPCAM-202ENST00000405271 LAMTOR3Q9UHA4 124 aa13.13□□□□□ -0.31
EPCAM-202ENST00000405271 SMCPP49901 116 aaPredicted RBP13.12□□□□□ -0.31
EPCAM-202ENST00000405271 SMIM29Q86T20 159 aa13.12□□□□□ -0.31
EPCAM-202ENST00000405271 LRP1Q07954 4544 aaKnown RBP13.12□□□□□ -0.31
EPCAM-202ENST00000405271 KRTAP29-1A8MX34 341 aaPredicted RBP13.1□□□□□ -0.31
EPCAM-202ENST00000405271 NDUFV3P56181 108 aaKnown RBP13.1□□□□□ -0.31
EPCAM-202ENST00000405271 C3orf22Q8N5N4 141 aa13.1□□□□□ -0.31
EPCAM-202ENST00000405271 F8WEM9 126 aa13.08□□□□□ -0.31
EPCAM-202ENST00000405271 J3QL48 77 aa13.08□□□□□ -0.31
EPCAM-202ENST00000405271 ANAPC11Q9NYG5 84 aa13.08□□□□□ -0.32
EPCAM-202ENST00000405271 JMJD7-PLA2G4BH0Y9G9 81 aa13.04□□□□□ -0.32
EPCAM-202ENST00000405271 CRYGAP11844 174 aa13.04□□□□□ -0.32
EPCAM-202ENST00000405271 OXTP01178 125 aa13.03□□□□□ -0.32
EPCAM-202ENST00000405271 IGLV8-61A0A075B6I0 122 aa13.02□□□□□ -0.33
EPCAM-202ENST00000405271 A0A087X002 238 aa13.02□□□□□ -0.33
EPCAM-202ENST00000405271 IGLV9-49A0A0B4J1Y8 123 aa13.02□□□□□ -0.33
EPCAM-202ENST00000405271 Q8NBF4 154 aa13.02□□□□□ -0.33
EPCAM-202ENST00000405271 FAT3Q8TDW7 4589 aa13.01□□□□□ -0.33
EPCAM-202ENST00000405271 C9orf153Q5TBE3 101 aa13.01□□□□□ -0.33
EPCAM-202ENST00000405271 OBSCN-AS1Q96MR7 158 aa13□□□□□ -0.33
EPCAM-202ENST00000405271 TEN1Q86WV5 123 aa12.99□□□□□ -0.33
EPCAM-202ENST00000405271 RBM3P98179 157 aaKnown RBP12.98□□□□□ -0.33
EPCAM-202ENST00000405271 MOBPQ13875 183 aa12.98□□□□□ -0.33
EPCAM-202ENST00000405271 A0A1B0GV72 72 aa12.98□□□□□ -0.33
EPCAM-202ENST00000405271 KRTAP13-2Q52LG2 175 aa12.98□□□□□ -0.33
EPCAM-202ENST00000405271 Q6JHZ5 121 aa12.97□□□□□ -0.33
EPCAM-202ENST00000405271 ETDBQ3ZM63 59 aa12.96□□□□□ -0.33
EPCAM-202ENST00000405271 SSBP3-AS1Q7Z2R9 100 aa12.94□□□□□ -0.34
EPCAM-202ENST00000405271 PRR26Q8N8Z3 221 aa12.94□□□□□ -0.34
EPCAM-202ENST00000405271 DSCR8Q96T75 97 aa12.94□□□□□ -0.34
EPCAM-202ENST00000405271 TRBV7-4A0A0J9YYF1 115 aa12.93□□□□□ -0.34
EPCAM-202ENST00000405271 IGFL1Q6UW32 110 aa12.92□□□□□ -0.34
EPCAM-202ENST00000405271 TYMSOSQ8TAI1 123 aa12.92□□□□□ -0.34
EPCAM-202ENST00000405271 C14orf132Q9NPU4 83 aa12.92□□□□□ -0.34
EPCAM-202ENST00000405271 LOC110117498A0A087WWA1 95 aa12.9□□□□□ -0.34
EPCAM-202ENST00000405271 PDE6GP18545 87 aa12.89□□□□□ -0.35
EPCAM-202ENST00000405271 C21orf62-AS1Q17RA5 79 aa12.89□□□□□ -0.35
EPCAM-202ENST00000405271 MT1HL1P0DM35 61 aa12.86□□□□□ -0.35
EPCAM-202ENST00000405271 Q6ZQT0 140 aa12.86□□□□□ -0.35
EPCAM-202ENST00000405271 A0A0G2JQZ4 141 aa12.83□□□□□ -0.36
EPCAM-202ENST00000405271 CCKP06307 115 aa12.82□□□□□ -0.36
EPCAM-202ENST00000405271 KRTAP10-8P60410 259 aa12.81□□□□□ -0.36
EPCAM-202ENST00000405271 CD164Q04900 197 aa12.81□□□□□ -0.36
EPCAM-202ENST00000405271 Q6Q795 121 aa12.81□□□□□ -0.36
EPCAM-202ENST00000405271 A0A1W2PNM2 257 aa12.8□□□□□ -0.36
EPCAM-202ENST00000405271 LINC00304Q8N9R0 145 aa12.78□□□□□ -0.36
EPCAM-202ENST00000405271 VPS25Q9BRG1 176 aa12.78□□□□□ -0.36
EPCAM-202ENST00000405271 TNXBP22105 4242 aa12.76□□□□□ -0.37
EPCAM-202ENST00000405271 C4orf48Q5BLP8 95 aa12.76□□□□□ -0.37
EPCAM-202ENST00000405271 SPAG11AQ6PDA7 123 aa12.76□□□□□ -0.37
EPCAM-202ENST00000405271 A0A1B0GW54 56 aa12.75□□□□□ -0.37
EPCAM-202ENST00000405271 TRBV7-7A0A0K0K1E9 115 aa12.74□□□□□ -0.37
EPCAM-202ENST00000405271 HRCT1Q6UXD1 115 aa12.73□□□□□ -0.37
EPCAM-202ENST00000405271 SPINK1P00995 79 aa12.72□□□□□ -0.37
EPCAM-202ENST00000405271 HMCN2Q8NDA2 5059 aa12.71□□□□□ -0.38
EPCAM-202ENST00000405271 RPS29P62273 56 aaKnown RBP12.7□□□□□ -0.38
EPCAM-202ENST00000405271 J3QR89 54 aa12.68□□□□□ -0.38
EPCAM-202ENST00000405271 A0A087WSZ3 146 aa12.67□□□□□ -0.38
EPCAM-202ENST00000405271 LIMD2Q9BT23 127 aa12.67□□□□□ -0.38
EPCAM-202ENST00000405271 SS18L2Q9UHA2 77 aa12.66□□□□□ -0.38
EPCAM-202ENST00000405271 FAM240AA0A1B0GVK7 77 aa12.65□□□□□ -0.38
EPCAM-202ENST00000405271 Q5XG85 94 aa12.64□□□□□ -0.39
EPCAM-202ENST00000405271 ACYP1P07311 99 aa12.63□□□□□ -0.39
EPCAM-202ENST00000405271 K7ERU9 68 aa12.58□□□□□ -0.4
EPCAM-202ENST00000405271 ASB16-AS1Q495Z4 193 aa12.58□□□□□ -0.4
EPCAM-202ENST00000405271 LINC00846Q9NV44 126 aa12.57□□□□□ -0.4
EPCAM-202ENST00000405271 UBL5Q9BZL1 73 aa12.53□□□□□ -0.4
EPCAM-202ENST00000405271 NREPQ16612 68 aa12.52□□□□□ -0.4
EPCAM-202ENST00000405271 Q6ZVQ6 151 aa12.51□□□□□ -0.41
EPCAM-202ENST00000405271 LINC00472Q9H8W2 130 aa12.48□□□□□ -0.41
EPCAM-202ENST00000405271 Q96NJ1 140 aa12.47□□□□□ -0.41
EPCAM-202ENST00000405271 UBR4Q5T4S7 5183 aa12.47□□□□□ -0.41
EPCAM-202ENST00000405271 C1orf195Q5TG92 126 aa12.46□□□□□ -0.42
EPCAM-202ENST00000405271 J3KT08 172 aa12.42□□□□□ -0.42
EPCAM-202ENST00000405271 IGKV4-1P06312 121 aa12.39□□□□□ -0.43
EPCAM-202ENST00000405271 SIGMAR1Q99720 223 aa12.39□□□□□ -0.43
EPCAM-202ENST00000405271 BPY2O14599 106 aa12.38□□□□□ -0.43
EPCAM-202ENST00000405271 RETNLBQ9BQ08 111 aa12.38□□□□□ -0.43
EPCAM-202ENST00000405271 LRP2P98164 4655 aa12.38□□□□□ -0.43
EPCAM-202ENST00000405271 DEFB116Q30KQ4 102 aa12.37□□□□□ -0.43
EPCAM-202ENST00000405271 ATP5EP2Q5VTU8 51 aa12.37□□□□□ -0.43
EPCAM-202ENST00000405271 FP248Q71RG6 208 aaPredicted RBP12.37□□□□□ -0.43
EPCAM-202ENST00000405271 LINC00643Q86TS7 51 aa12.37□□□□□ -0.43
EPCAM-202ENST00000405271 CDIP1Q9H305 208 aa12.37□□□□□ -0.43
EPCAM-202ENST00000405271 CXCL6P80162 114 aa12.34□□□□□ -0.43
EPCAM-202ENST00000405271 A8MWP4 228 aa12.3□□□□□ -0.44
EPCAM-202ENST00000405271 DSCR10P59022 87 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms