RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 COX7BP24311 80 aa4.7□□□□□ -1.66
NUP43-204ENST00000403890 ADAMTSL4-AS1Q5T5F5 129 aa4.7□□□□□ -1.66
NUP43-204ENST00000403890 Q5XG85 94 aa4.7□□□□□ -1.66
NUP43-204ENST00000403890 PMCHL2Q9BQD1 86 aa4.7□□□□□ -1.66
NUP43-204ENST00000403890 SPANXDQ9BXN6 97 aa4.7□□□□□ -1.66
NUP43-204ENST00000403890 E9PLD3 99 aa4.69□□□□□ -1.66
NUP43-204ENST00000403890 SERF1AO75920 110 aa4.69□□□□□ -1.66
NUP43-204ENST00000403890 Q1RN00 199 aa4.69□□□□□ -1.66
NUP43-204ENST00000403890 LINC00308Q8TCZ7 52 aa4.69□□□□□ -1.66
NUP43-204ENST00000403890 COPS9Q8WXC6 57 aa4.69□□□□□ -1.66
NUP43-204ENST00000403890 TCL1BO95988 128 aa4.68□□□□□ -1.66
NUP43-204ENST00000403890 SOSTDC1Q6X4U4 206 aa4.68□□□□□ -1.66
NUP43-204ENST00000403890 TIMM17BO60830 172 aa4.67□□□□□ -1.66
NUP43-204ENST00000403890 ELOF1P60002 83 aaKnown RBP4.67□□□□□ -1.66
NUP43-204ENST00000403890 C6orf99Q4VX62 202 aa4.67□□□□□ -1.66
NUP43-204ENST00000403890 SMIM29Q86T20 159 aa4.67□□□□□ -1.66
NUP43-204ENST00000403890 TRBV20-1A0A075B6N2 111 aa4.66□□□□□ -1.66
NUP43-204ENST00000403890 YPEL4Q96NS1 127 aa4.66□□□□□ -1.66
NUP43-204ENST00000403890 TRBV7-6A0A0J9YX20 115 aa4.65□□□□□ -1.67
NUP43-204ENST00000403890 A0A1B0GWB2 263 aa4.65□□□□□ -1.67
NUP43-204ENST00000403890 A4D1N5 150 aa4.65□□□□□ -1.67
NUP43-204ENST00000403890 ZNF815PA8K554 130 aa4.65□□□□□ -1.67
NUP43-204ENST00000403890 Q75L30 129 aa4.65□□□□□ -1.67
NUP43-204ENST00000403890 NHP2Q9NX24 153 aaKnown RBP4.65□□□□□ -1.67
NUP43-204ENST00000403890 A6NDN8 102 aa4.64□□□□□ -1.67
NUP43-204ENST00000403890 F8WEM9 126 aa4.63□□□□□ -1.67
NUP43-204ENST00000403890 SYS1-DBNDD2H3BUS1 97 aa4.63□□□□□ -1.67
NUP43-204ENST00000403890 VAMP3Q15836 100 aa4.63□□□□□ -1.67
NUP43-204ENST00000403890 KRTAP5-11Q6L8G4 156 aa4.63□□□□□ -1.67
NUP43-204ENST00000403890 SCGB1D4Q6XE38 83 aa4.63□□□□□ -1.67
NUP43-204ENST00000403890 PET117Q6UWS5 81 aa4.62□□□□□ -1.67
NUP43-204ENST00000403890 C20orf166-AS1Q96NR2 134 aa4.62□□□□□ -1.67
NUP43-204ENST00000403890 IFITM1P13164 125 aa4.61□□□□□ -1.67
NUP43-204ENST00000403890 Q6ZVH6 145 aa4.61□□□□□ -1.67
NUP43-204ENST00000403890 PCP2Q8IVA1 136 aa4.61□□□□□ -1.67
NUP43-204ENST00000403890 LITAFQ99732 161 aa4.61□□□□□ -1.67
NUP43-204ENST00000403890 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
NUP43-204ENST00000403890 OBSCN-AS1Q96MR7 158 aa4.6□□□□□ -1.67
NUP43-204ENST00000403890 IGLV5-48A0A075B6I7 105 aa4.59□□□□□ -1.67
NUP43-204ENST00000403890 TRAV13-2A0A0B4J235 113 aa4.59□□□□□ -1.67
NUP43-204ENST00000403890 FAM236DA0A1B0GTK5 79 aa4.59□□□□□ -1.67
NUP43-204ENST00000403890 FAM236CP0DP71 79 aa4.59□□□□□ -1.67
NUP43-204ENST00000403890 LINC01545Q5VT33 79 aa4.59□□□□□ -1.67
NUP43-204ENST00000403890 SLC7A5P1Q8MH63 180 aa4.59□□□□□ -1.67
NUP43-204ENST00000403890 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.68
NUP43-204ENST00000403890 A0A0G2JQZ4 141 aa4.57□□□□□ -1.68
NUP43-204ENST00000403890 COLCA2A8K830 154 aa4.57□□□□□ -1.68
NUP43-204ENST00000403890 Q6JHZ5 121 aa4.57□□□□□ -1.68
NUP43-204ENST00000403890 MUSTN1Q8IVN3 82 aa4.57□□□□□ -1.68
NUP43-204ENST00000403890 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
NUP43-204ENST00000403890 hADV29S1A0JD25 119 aa4.54□□□□□ -1.68
NUP43-204ENST00000403890 LST1O00453 97 aa4.54□□□□□ -1.68
NUP43-204ENST00000403890 SNCGO76070 127 aa4.54□□□□□ -1.68
NUP43-204ENST00000403890 KRTDAPP60985 99 aa4.54□□□□□ -1.68
NUP43-204ENST00000403890 OCIAD2Q56VL3 154 aa4.54□□□□□ -1.68
NUP43-204ENST00000403890 SMIM11BQ8TCY0 68 aa4.54□□□□□ -1.68
NUP43-204ENST00000403890 Q96NJ1 140 aa4.54□□□□□ -1.68
NUP43-204ENST00000403890 SNHG12Q9BXW3 62 aa4.54□□□□□ -1.68
NUP43-204ENST00000403890 TRBV7-7A0A0K0K1E9 115 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BKO60814 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BJP06899 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 C3orf79P0CE67 100 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BOP23527 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BBP33778 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BDP58876 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BCP62807 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST2H2BEQ16778 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BHQ93079 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BNQ99877 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 HIST1H2BMQ99879 126 aa4.53□□□□□ -1.68
NUP43-204ENST00000403890 SCGB1D1O95968 90 aa4.52□□□□□ -1.69
NUP43-204ENST00000403890 LINC00575Q6W349 94 aa4.52□□□□□ -1.69
NUP43-204ENST00000403890 CLEC2BQ92478 149 aa4.52□□□□□ -1.69
NUP43-204ENST00000403890 KRTAP2-2Q9BYT5 123 aa4.52□□□□□ -1.69
NUP43-204ENST00000403890 RBM12B-AS1Q9P1G2 102 aa4.52□□□□□ -1.69
NUP43-204ENST00000403890 SNRPEP62304 92 aaKnown RBP4.51□□□□□ -1.69
NUP43-204ENST00000403890 Q6ZQY7 126 aa4.51□□□□□ -1.69
NUP43-204ENST00000403890 KRTAP2-3P0C7H8 128 aa4.5□□□□□ -1.69
NUP43-204ENST00000403890 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
NUP43-204ENST00000403890 IGFL1Q6UW32 110 aa4.5□□□□□ -1.69
NUP43-204ENST00000403890 PPDPFLQ8WWR9 84 aa4.5□□□□□ -1.69
NUP43-204ENST00000403890 KRTAP2-4Q9BYR9 128 aa4.5□□□□□ -1.69
NUP43-204ENST00000403890 SS18L2Q9UHA2 77 aa4.5□□□□□ -1.69
NUP43-204ENST00000403890 A8MUU9 505 aa4.49□□□□□ -1.69
NUP43-204ENST00000403890 HSBP1L1C9JCN9 74 aa4.49□□□□□ -1.69
NUP43-204ENST00000403890 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.49□□□□□ -1.69
NUP43-204ENST00000403890 C12orf57Q99622 126 aa4.49□□□□□ -1.69
NUP43-204ENST00000403890 BVES-AS1Q5T3Y7 98 aa4.48□□□□□ -1.69
NUP43-204ENST00000403890 ATOH7Q8N100 152 aa4.48□□□□□ -1.69
NUP43-204ENST00000403890 MPLKIPQ8TAP9 179 aa4.48□□□□□ -1.69
NUP43-204ENST00000403890 HRES1P13985 223 aa4.45□□□□□ -1.7
NUP43-204ENST00000403890 KMT2DO14686 5537 aa4.44□□□□□ -1.7
NUP43-204ENST00000403890 KRTAP5-9P26371 169 aa4.44□□□□□ -1.7
NUP43-204ENST00000403890 COA6Q5JTJ3 125 aaKnown RBP4.44□□□□□ -1.7
NUP43-204ENST00000403890 TEN1Q86WV5 123 aa4.44□□□□□ -1.7
NUP43-204ENST00000403890 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
NUP43-204ENST00000403890 A8MWP4 228 aa4.43□□□□□ -1.7
NUP43-204ENST00000403890 MDN1Q9NU22 5596 aa4.43□□□□□ -1.7
NUP43-204ENST00000403890 H0YGX0 51 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms