RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 TRIAP1O43715 76 aa3.23□□□□□ -1.89
HMGB1P20-201ENST00000402555 SCGB1D1O95968 90 aa3.23□□□□□ -1.89
HMGB1P20-201ENST00000402555 SPRR1BP22528 89 aa3.23□□□□□ -1.89
HMGB1P20-201ENST00000402555 TAL2Q16559 108 aa3.23□□□□□ -1.89
HMGB1P20-201ENST00000402555 KRTAP13-3Q3SY46 172 aa3.23□□□□□ -1.89
HMGB1P20-201ENST00000402555 COPS9Q8WXC6 57 aa3.23□□□□□ -1.89
HMGB1P20-201ENST00000402555 A0A0G2JQZ4 141 aa3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 TRBV7-6A0A0J9YX20 115 aa3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 A0A1B0GWB2 263 aa3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 A4D1N5 150 aa3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 SLC25A20O43772 301 aa3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 LINC01547P58512 204 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 RPS29P62273 56 aaKnown RBP3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 SMIM11BQ8TCY0 68 aa3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 LAMTOR3Q9UHA4 124 aa3.22□□□□□ -1.89
HMGB1P20-201ENST00000402555 TRAV13-2A0A0B4J235 113 aa3.21□□□□□ -1.9
HMGB1P20-201ENST00000402555 TEX49A0A1B0GTD5 131 aa3.21□□□□□ -1.9
HMGB1P20-201ENST00000402555 SLC25A34Q6PIV7 304 aa3.21□□□□□ -1.9
HMGB1P20-201ENST00000402555 SMIM29Q86T20 159 aa3.21□□□□□ -1.9
HMGB1P20-201ENST00000402555 C12orf57Q99622 126 aa3.21□□□□□ -1.9
HMGB1P20-201ENST00000402555 IGLV5-48A0A075B6I7 105 aa3.2□□□□□ -1.9
HMGB1P20-201ENST00000402555 H7C2G1 150 aa3.2□□□□□ -1.9
HMGB1P20-201ENST00000402555 COX8AP10176 69 aa3.19□□□□□ -1.9
HMGB1P20-201ENST00000402555 C14orf144Q96I85 54 aa3.19□□□□□ -1.9
HMGB1P20-201ENST00000402555 HIST1H4GQ99525 98 aa3.19□□□□□ -1.9
HMGB1P20-201ENST00000402555 PRO1933Q9H354 126 aa3.19□□□□□ -1.9
HMGB1P20-201ENST00000402555 A0A0U1RQV1 116 aa3.18□□□□□ -1.9
HMGB1P20-201ENST00000402555 SPATA45Q537H7 98 aa3.18□□□□□ -1.9
HMGB1P20-201ENST00000402555 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
HMGB1P20-201ENST00000402555 LINC00575Q6W349 94 aa3.18□□□□□ -1.9
HMGB1P20-201ENST00000402555 LIMD2Q9BT23 127 aa3.18□□□□□ -1.9
HMGB1P20-201ENST00000402555 KRTAP4-1Q9BYQ7 146 aa3.18□□□□□ -1.9
HMGB1P20-201ENST00000402555 NHP2Q9NX24 153 aaKnown RBP3.18□□□□□ -1.9
HMGB1P20-201ENST00000402555 PAM16Q9Y3D7 125 aa3.18□□□□□ -1.9
HMGB1P20-201ENST00000402555 C9orf92A6NGG3 77 aa3.17□□□□□ -1.9
HMGB1P20-201ENST00000402555 CD164Q04900 197 aa3.17□□□□□ -1.9
HMGB1P20-201ENST00000402555 VAMP3Q15836 100 aa3.17□□□□□ -1.9
HMGB1P20-201ENST00000402555 ASB16-AS1Q495Z4 193 aa3.17□□□□□ -1.9
HMGB1P20-201ENST00000402555 Q6ZQY7 126 aa3.17□□□□□ -1.9
HMGB1P20-201ENST00000402555 hADV29S1A0JD25 119 aa3.16□□□□□ -1.9
HMGB1P20-201ENST00000402555 DLEU1O43261 78 aa3.16□□□□□ -1.9
HMGB1P20-201ENST00000402555 SEC61BP60468 96 aaKnown RBP3.16□□□□□ -1.9
HMGB1P20-201ENST00000402555 C2orf91Q6ZV80 131 aa3.16□□□□□ -1.9
HMGB1P20-201ENST00000402555 VAMP8Q9BV40 100 aa3.16□□□□□ -1.9
HMGB1P20-201ENST00000402555 F8WEM9 126 aa3.15□□□□□ -1.91
HMGB1P20-201ENST00000402555 CFC1BP0CG36 223 aa3.15□□□□□ -1.91
HMGB1P20-201ENST00000402555 CFC1P0CG37 223 aa3.15□□□□□ -1.91
HMGB1P20-201ENST00000402555 C1orf195Q5TG92 126 aa3.15□□□□□ -1.91
HMGB1P20-201ENST00000402555 Q5XG85 94 aa3.14□□□□□ -1.91
HMGB1P20-201ENST00000402555 Q8N9P0 234 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P20-201ENST00000402555 RAB37Q96AX2 223 aa3.14□□□□□ -1.91
HMGB1P20-201ENST00000402555 HIGD1BQ9P298 99 aa3.14□□□□□ -1.91
HMGB1P20-201ENST00000402555 H3BUT2 72 aa3.13□□□□□ -1.91
HMGB1P20-201ENST00000402555 FXYD2P54710 66 aa3.13□□□□□ -1.91
HMGB1P20-201ENST00000402555 OCIAD2Q56VL3 154 aa3.13□□□□□ -1.91
HMGB1P20-201ENST00000402555 PCOTHQ58A44 107 aa3.13□□□□□ -1.91
HMGB1P20-201ENST00000402555 BVES-AS1Q5T3Y7 98 aa3.13□□□□□ -1.91
HMGB1P20-201ENST00000402555 IGFL1Q6UW32 110 aa3.13□□□□□ -1.91
HMGB1P20-201ENST00000402555 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P20-201ENST00000402555 FAM218AQ96MZ4 157 aa3.13□□□□□ -1.91
HMGB1P20-201ENST00000402555 IGLV8-61A0A075B6I0 122 aa3.12□□□□□ -1.91
HMGB1P20-201ENST00000402555 A0A0B4J2C4 111 aa3.12□□□□□ -1.91
HMGB1P20-201ENST00000402555 PYY3Q5JQD4 70 aa3.12□□□□□ -1.91
HMGB1P20-201ENST00000402555 Q6JHZ5 121 aa3.12□□□□□ -1.91
HMGB1P20-201ENST00000402555 CEND1Q8N111 149 aa3.12□□□□□ -1.91
HMGB1P20-201ENST00000402555 CLEC2BQ92478 149 aa3.12□□□□□ -1.91
HMGB1P20-201ENST00000402555 SNHG12Q9BXW3 62 aa3.12□□□□□ -1.91
HMGB1P20-201ENST00000402555 TRBV7-7A0A0K0K1E9 115 aa3.11□□□□□ -1.91
HMGB1P20-201ENST00000402555 TCL1BO95988 128 aa3.11□□□□□ -1.91
HMGB1P20-201ENST00000402555 H0YGX0 51 aa3.1□□□□□ -1.91
HMGB1P20-201ENST00000402555 K7ERJ3 54 aa3.1□□□□□ -1.91
HMGB1P20-201ENST00000402555 PPDPFLQ8WWR9 84 aa3.1□□□□□ -1.91
HMGB1P20-201ENST00000402555 PRO1854Q9UHT4 67 aa3.1□□□□□ -1.91
HMGB1P20-201ENST00000402555 NDUFV3P56181 108 aaKnown RBP3.09□□□□□ -1.91
HMGB1P20-201ENST00000402555 A0A1B0GV72 72 aa3.08□□□□□ -1.92
HMGB1P20-201ENST00000402555 SNCGO76070 127 aa3.08□□□□□ -1.92
HMGB1P20-201ENST00000402555 FABP2P12104 132 aa3.08□□□□□ -1.92
HMGB1P20-201ENST00000402555 RPL37P61927 97 aaKnown RBP3.08□□□□□ -1.92
HMGB1P20-201ENST00000402555 HSD52Q0P140 79 aa3.08□□□□□ -1.92
HMGB1P20-201ENST00000402555 KRTAP19-2Q3LHN2 52 aa3.08□□□□□ -1.92
HMGB1P20-201ENST00000402555 H3BMG7 143 aa3.07□□□□□ -1.92
HMGB1P20-201ENST00000402555 LST1O00453 97 aa3.07□□□□□ -1.92
HMGB1P20-201ENST00000402555 PSMB2P49721 201 aa3.07□□□□□ -1.92
HMGB1P20-201ENST00000402555 OBSCN-AS1Q96MR7 158 aa3.07□□□□□ -1.92
HMGB1P20-201ENST00000402555 A0A087WSZ3 146 aa3.06□□□□□ -1.92
HMGB1P20-201ENST00000402555 A0A1B0GX51 115 aa3.06□□□□□ -1.92
HMGB1P20-201ENST00000402555 UQCR10Q9UDW1 63 aa3.06□□□□□ -1.92
HMGB1P20-201ENST00000402555 A0A1W2PNM2 257 aa3.05□□□□□ -1.92
HMGB1P20-201ENST00000402555 Q6Q795 121 aa3.05□□□□□ -1.92
HMGB1P20-201ENST00000402555 TEN1Q86WV5 123 aa3.05□□□□□ -1.92
HMGB1P20-201ENST00000402555 SS18L2Q9UHA2 77 aa3.05□□□□□ -1.92
HMGB1P20-201ENST00000402555 DNAL4O96015 105 aa3.04□□□□□ -1.92
HMGB1P20-201ENST00000402555 MT1HP80294 61 aa3.04□□□□□ -1.92
HMGB1P20-201ENST00000402555 Q96NJ1 140 aa3.04□□□□□ -1.92
HMGB1P20-201ENST00000402555 ORMDL1Q9P0S3 153 aa3.04□□□□□ -1.92
HMGB1P20-201ENST00000402555 COX6CP09669 75 aa3.03□□□□□ -1.92
HMGB1P20-201ENST00000402555 ANKRD29Q8N6D5 301 aa3.03□□□□□ -1.92
HMGB1P20-201ENST00000402555 SCGB1C2P0DMR2 95 aa3.02□□□□□ -1.93
HMGB1P20-201ENST00000402555 DSCR10P59022 87 aa3.02□□□□□ -1.93
HMGB1P20-201ENST00000402555 Q75L30 129 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms