RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 A0A1B0GVY2 172 aa15.65■□□□□ 0.1
CPNE1-205ENST00000401607 KMT2CQ8NEZ4 4911 aaKnown RBP15.65■□□□□ 0.1
CPNE1-205ENST00000401607 ZNF861PO60384 105 aa15.61■□□□□ 0.09
CPNE1-205ENST00000401607 LINC00643Q86TS7 51 aa15.6■□□□□ 0.09
CPNE1-205ENST00000401607 IGLV7-43P04211 117 aa15.58■□□□□ 0.08
CPNE1-205ENST00000401607 C21orf62-AS1Q17RA5 79 aa15.58■□□□□ 0.08
CPNE1-205ENST00000401607 F8WEM9 126 aa15.57■□□□□ 0.08
CPNE1-205ENST00000401607 LRP1BQ9NZR2 4599 aa15.56■□□□□ 0.08
CPNE1-205ENST00000401607 SPRR4Q96PI1 79 aa15.56■□□□□ 0.08
CPNE1-205ENST00000401607 IGLV8-61A0A075B6I0 122 aa15.54■□□□□ 0.08
CPNE1-205ENST00000401607 PKHD1P08F94 4074 aa15.54■□□□□ 0.08
CPNE1-205ENST00000401607 A0A1W2PNM2 257 aa15.53■□□□□ 0.08
CPNE1-205ENST00000401607 DYNC1H1Q14204 4646 aaKnown RBP15.52■□□□□ 0.08
CPNE1-205ENST00000401607 SRRM2Q9UQ35 2752 aaKnown RBP15.51■□□□□ 0.07
CPNE1-205ENST00000401607 LINC00483Q53H64 154 aa15.51■□□□□ 0.07
CPNE1-205ENST00000401607 IGFL1Q6UW32 110 aa15.49■□□□□ 0.07
CPNE1-205ENST00000401607 UBL5Q9BZL1 73 aa15.49■□□□□ 0.07
CPNE1-205ENST00000401607 ZNF706Q9Y5V0 76 aaPredicted RBP15.49■□□□□ 0.07
CPNE1-205ENST00000401607 Q8NBF4 154 aa15.49■□□□□ 0.07
CPNE1-205ENST00000401607 A0A0G2JQZ4 141 aa15.48■□□□□ 0.07
CPNE1-205ENST00000401607 Q6JHZ5 121 aa15.48■□□□□ 0.07
CPNE1-205ENST00000401607 TRBV7-7A0A0K0K1E9 115 aa15.47■□□□□ 0.07
CPNE1-205ENST00000401607 Q6ZVQ6 151 aa15.46■□□□□ 0.07
CPNE1-205ENST00000401607 IGKV3D-7A0A0C4DH55 119 aa15.43■□□□□ 0.06
CPNE1-205ENST00000401607 Q6Q795 121 aa15.42■□□□□ 0.06
CPNE1-205ENST00000401607 A0A1B0GW54 56 aa15.41■□□□□ 0.06
CPNE1-205ENST00000401607 SCGB1A1P11684 91 aa15.4■□□□□ 0.06
CPNE1-205ENST00000401607 ANAPC11Q9NYG5 84 aa15.39■□□□□ 0.05
CPNE1-205ENST00000401607 CRYGAP11844 174 aa15.38■□□□□ 0.05
CPNE1-205ENST00000401607 IMUPQ9GZP8 106 aa15.38■□□□□ 0.05
CPNE1-205ENST00000401607 IGLV9-49A0A0B4J1Y8 123 aa15.36■□□□□ 0.05
CPNE1-205ENST00000401607 ATP5EP2Q5VTU8 51 aa15.36■□□□□ 0.05
CPNE1-205ENST00000401607 APOBP04114 4563 aaKnown RBP15.34■□□□□ 0.05
CPNE1-205ENST00000401607 RYR3Q15413 4870 aa15.34■□□□□ 0.05
CPNE1-205ENST00000401607 C9orf153Q5TBE3 101 aa15.32■□□□□ 0.04
CPNE1-205ENST00000401607 NREPQ16612 68 aa15.31■□□□□ 0.04
CPNE1-205ENST00000401607 VPS13BQ7Z7G8 4022 aa15.3■□□□□ 0.04
CPNE1-205ENST00000401607 MOBPQ13875 183 aa15.27■□□□□ 0.04
CPNE1-205ENST00000401607 RPL37AP61513 92 aaKnown RBP15.26■□□□□ 0.03
CPNE1-205ENST00000401607 PCP4P48539 62 aa15.26■□□□□ 0.03
CPNE1-205ENST00000401607 CXCL6P80162 114 aa15.26■□□□□ 0.03
CPNE1-205ENST00000401607 A0A087WSZ3 146 aa15.25■□□□□ 0.03
CPNE1-205ENST00000401607 SMR3BP02814 79 aaPredicted RBP15.24■□□□□ 0.03
CPNE1-205ENST00000401607 A0A087WVE0 104 aa15.21■□□□□ 0.03
CPNE1-205ENST00000401607 HIST1H4AP62805 103 aaKnown RBP15.21■□□□□ 0.02
CPNE1-205ENST00000401607 FAM236AA0A1B0GUQ0 79 aa15.18■□□□□ 0.02
CPNE1-205ENST00000401607 FAM236BA0A1B0GV22 79 aa15.18■□□□□ 0.02
CPNE1-205ENST00000401607 BPY2O14599 106 aa15.17■□□□□ 0.02
CPNE1-205ENST00000401607 KRTAP1-4P0C5Y4 121 aa15.16■□□□□ 0.02
CPNE1-205ENST00000401607 A0A087X002 238 aa15.14■□□□□ 0.01
CPNE1-205ENST00000401607 FAM229BQ4G0N7 80 aa15.13■□□□□ 0.01
CPNE1-205ENST00000401607 KRTAP10-4P60372 401 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-205ENST00000401607 HRCT1Q6UXD1 115 aa15.12■□□□□ 0.01
CPNE1-205ENST00000401607 SPINK6Q6UWN8 80 aa15.11■□□□□ 0.01
CPNE1-205ENST00000401607 FAT1Q14517 4588 aa15.11■□□□□ 0.01
CPNE1-205ENST00000401607 KRTAP13-2Q52LG2 175 aa15.11■□□□□ 0.01
CPNE1-205ENST00000401607 Q8N9L7 120 aa15.1■□□□□ 0.01
CPNE1-205ENST00000401607 SSBP3-AS1Q7Z2R9 100 aa15.08■□□□□ 0.01
CPNE1-205ENST00000401607 IGKV4-1P06312 121 aa15.07■□□□□ 0
CPNE1-205ENST00000401607 DSCR10P59022 87 aa15.07■□□□□ 0
CPNE1-205ENST00000401607 DEFB116Q30KQ4 102 aa15.06■□□□□ 0
CPNE1-205ENST00000401607 LINC00472Q9H8W2 130 aa15.04■□□□□ -0
CPNE1-205ENST00000401607 ANAPC13Q9BS18 74 aa15.02□□□□□ -0.01
CPNE1-205ENST00000401607 PLA2G1BP04054 148 aaKnown RBP15.01□□□□□ -0.01
CPNE1-205ENST00000401607 CD164Q04900 197 aa14.99□□□□□ -0.01
CPNE1-205ENST00000401607 SS18L2Q9UHA2 77 aa14.98□□□□□ -0.01
CPNE1-205ENST00000401607 K7EQZ3 153 aa14.97□□□□□ -0.01
CPNE1-205ENST00000401607 Q96NJ1 140 aa14.97□□□□□ -0.01
CPNE1-205ENST00000401607 CDK2AP2O75956 126 aa14.96□□□□□ -0.02
CPNE1-205ENST00000401607 ATOX1O00244 68 aa14.94□□□□□ -0.02
CPNE1-205ENST00000401607 HSPG2P98160 4391 aa14.93□□□□□ -0.02
CPNE1-205ENST00000401607 TYMSOSQ8TAI1 123 aa14.88□□□□□ -0.03
CPNE1-205ENST00000401607 J3KT08 172 aa14.88□□□□□ -0.03
CPNE1-205ENST00000401607 RYR1P21817 5038 aa14.87□□□□□ -0.03
CPNE1-205ENST00000401607 PKHD1L1Q86WI1 4243 aa14.87□□□□□ -0.03
CPNE1-205ENST00000401607 PRR26Q8N8Z3 221 aa14.87□□□□□ -0.03
CPNE1-205ENST00000401607 A8MWP4 228 aa14.86□□□□□ -0.03
CPNE1-205ENST00000401607 FAM229AH3BQW9 127 aa14.86□□□□□ -0.03
CPNE1-205ENST00000401607 PRR15Q8IV56 129 aa14.83□□□□□ -0.04
CPNE1-205ENST00000401607 Q5VSD8 79 aa14.81□□□□□ -0.04
CPNE1-205ENST00000401607 ASB16-AS1Q495Z4 193 aa14.8□□□□□ -0.04
CPNE1-205ENST00000401607 EPPK1P58107 5090 aaKnown RBP14.79□□□□□ -0.04
CPNE1-205ENST00000401607 Q5XG85 94 aa14.78□□□□□ -0.04
CPNE1-205ENST00000401607 HCG22E2RYF7 251 aa14.77□□□□□ -0.05
CPNE1-205ENST00000401607 KRTAP17-1Q9BYP8 105 aa14.77□□□□□ -0.05
CPNE1-205ENST00000401607 SERP2Q8N6R1 65 aa14.76□□□□□ -0.05
CPNE1-205ENST00000401607 CCDC179H3BU77 68 aa14.75□□□□□ -0.05
CPNE1-205ENST00000401607 COX7CP15954 63 aa14.74□□□□□ -0.05
CPNE1-205ENST00000401607 NDUFB1O75438 58 aa14.73□□□□□ -0.05
CPNE1-205ENST00000401607 C4orf48Q5BLP8 95 aa14.73□□□□□ -0.05
CPNE1-205ENST00000401607 KIAA1109Q2LD37 5005 aa14.7□□□□□ -0.06
CPNE1-205ENST00000401607 SPINK1P00995 79 aa14.7□□□□□ -0.06
CPNE1-205ENST00000401607 LINC00304Q8N9R0 145 aa14.7□□□□□ -0.06
CPNE1-205ENST00000401607 LIMD2Q9BT23 127 aa14.7□□□□□ -0.06
CPNE1-205ENST00000401607 WFDC13Q8IUB5 93 aa14.7□□□□□ -0.06
CPNE1-205ENST00000401607 SMIM20Q8N5G0 67 aa14.7□□□□□ -0.06
CPNE1-205ENST00000401607 TRAV7A0A075B6U4 112 aa14.69□□□□□ -0.06
CPNE1-205ENST00000401607 KRTAP29-1A8MX34 341 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-205ENST00000401607 A0A1B0GVX0 72 aa14.68□□□□□ -0.06
CPNE1-205ENST00000401607 UQCRQO14949 82 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms