RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 HIST2H2BEQ16778 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BHQ93079 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BNQ99877 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 HIST1H2BMQ99879 126 aa6.13□□□□□ -1.43
LINC00544-201ENST00000400540 NHP2Q9NX24 153 aaKnown RBP6.13□□□□□ -1.43
LINC00544-201ENST00000400540 TRBV7-7A0A0K0K1E9 115 aa6.12□□□□□ -1.43
LINC00544-201ENST00000400540 IFITM1P13164 125 aa6.12□□□□□ -1.43
LINC00544-201ENST00000400540 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
LINC00544-201ENST00000400540 COPS9Q8WXC6 57 aa6.11□□□□□ -1.43
LINC00544-201ENST00000400540 CLEC2BQ92478 149 aa6.11□□□□□ -1.43
LINC00544-201ENST00000400540 GHRHP01286 108 aa6.1□□□□□ -1.43
LINC00544-201ENST00000400540 CFC1P0CG37 223 aa6.1□□□□□ -1.43
LINC00544-201ENST00000400540 KRTDAPP60985 99 aa6.1□□□□□ -1.43
LINC00544-201ENST00000400540 Q6ZQY7 126 aa6.1□□□□□ -1.43
LINC00544-201ENST00000400540 TRAV13-2A0A0B4J235 113 aa6.09□□□□□ -1.43
LINC00544-201ENST00000400540 ATOH7Q8N100 152 aa6.09□□□□□ -1.43
LINC00544-201ENST00000400540 Q6JHZ5 121 aa6.08□□□□□ -1.44
LINC00544-201ENST00000400540 LINC00575Q6W349 94 aa6.08□□□□□ -1.44
LINC00544-201ENST00000400540 Q6ZVH6 145 aa6.08□□□□□ -1.44
LINC00544-201ENST00000400540 SLC7A5P1Q8MH63 180 aa6.08□□□□□ -1.44
LINC00544-201ENST00000400540 Q96NJ1 140 aa6.08□□□□□ -1.44
LINC00544-201ENST00000400540 C20orf202A1L168 122 aa6.07□□□□□ -1.44
LINC00544-201ENST00000400540 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
LINC00544-201ENST00000400540 hADV29S1A0JD25 119 aa6.06□□□□□ -1.44
LINC00544-201ENST00000400540 SYNE2Q8WXH0 6885 aaKnown RBP6.06□□□□□ -1.44
LINC00544-201ENST00000400540 MT2AP02795 61 aa6.05□□□□□ -1.44
LINC00544-201ENST00000400540 OCIAD2Q56VL3 154 aa6.05□□□□□ -1.44
LINC00544-201ENST00000400540 H3BUT2 72 aa6.04□□□□□ -1.44
LINC00544-201ENST00000400540 LST1O00453 97 aa6.04□□□□□ -1.44
LINC00544-201ENST00000400540 VAMP3Q15836 100 aa6.04□□□□□ -1.44
LINC00544-201ENST00000400540 C20orf166-AS1Q96NR2 134 aa6.03□□□□□ -1.44
LINC00544-201ENST00000400540 A8MUU9 505 aa6.02□□□□□ -1.45
LINC00544-201ENST00000400540 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
LINC00544-201ENST00000400540 MT1FP04733 61 aa6.01□□□□□ -1.45
LINC00544-201ENST00000400540 TRBV20-1A0A075B6N2 111 aa6□□□□□ -1.45
LINC00544-201ENST00000400540 COA6Q5JTJ3 125 aaKnown RBP6□□□□□ -1.45
LINC00544-201ENST00000400540 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6□□□□□ -1.45
LINC00544-201ENST00000400540 KRTAP16-1A8MUX0 517 aa5.98□□□□□ -1.45
LINC00544-201ENST00000400540 DSCR10P59022 87 aa5.98□□□□□ -1.45
LINC00544-201ENST00000400540 C12orf57Q99622 126 aa5.98□□□□□ -1.45
LINC00544-201ENST00000400540 SNHG12Q9BXW3 62 aa5.98□□□□□ -1.45
LINC00544-201ENST00000400540 PPDPFLQ8WWR9 84 aa5.97□□□□□ -1.45
LINC00544-201ENST00000400540 KRTAP9-3Q9BYQ3 159 aa5.96□□□□□ -1.46
LINC00544-201ENST00000400540 SS18L2Q9UHA2 77 aa5.96□□□□□ -1.46
LINC00544-201ENST00000400540 FAM236DA0A1B0GTK5 79 aa5.95□□□□□ -1.46
LINC00544-201ENST00000400540 FAM236CP0DP71 79 aa5.95□□□□□ -1.46
LINC00544-201ENST00000400540 A0A087WSZ3 146 aa5.94□□□□□ -1.46
LINC00544-201ENST00000400540 TMEM238LA0A1B0GVL6 79 aa5.93□□□□□ -1.46
LINC00544-201ENST00000400540 SCGB1D1O95968 90 aa5.93□□□□□ -1.46
LINC00544-201ENST00000400540 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
LINC00544-201ENST00000400540 BVES-AS1Q5T3Y7 98 aa5.93□□□□□ -1.46
LINC00544-201ENST00000400540 SNRPEP62304 92 aaKnown RBP5.92□□□□□ -1.46
LINC00544-201ENST00000400540 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
LINC00544-201ENST00000400540 HRES1P13985 223 aa5.91□□□□□ -1.46
LINC00544-201ENST00000400540 MPLKIPQ8TAP9 179 aa5.91□□□□□ -1.46
LINC00544-201ENST00000400540 SIGMAR1Q99720 223 aa5.9□□□□□ -1.46
LINC00544-201ENST00000400540 NDUFV3P56181 108 aaKnown RBP5.89□□□□□ -1.47
LINC00544-201ENST00000400540 FAM218AQ96MZ4 157 aa5.89□□□□□ -1.47
LINC00544-201ENST00000400540 HIST1H4GQ99525 98 aa5.88□□□□□ -1.47
LINC00544-201ENST00000400540 RBM12B-AS1Q9P1G2 102 aa5.88□□□□□ -1.47
LINC00544-201ENST00000400540 A0A1W2PNM2 257 aa5.87□□□□□ -1.47
LINC00544-201ENST00000400540 NOTCH2NLQ7Z3S9 236 aa5.87□□□□□ -1.47
LINC00544-201ENST00000400540 HSBP1L1C9JCN9 74 aa5.86□□□□□ -1.47
LINC00544-201ENST00000400540 H3BMG7 143 aa5.86□□□□□ -1.47
LINC00544-201ENST00000400540 LINC00313P59037 77 aa5.86□□□□□ -1.47
LINC00544-201ENST00000400540 HIST1H2BLQ99880 126 aa5.85□□□□□ -1.47
LINC00544-201ENST00000400540 IGKV4-1P06312 121 aa5.84□□□□□ -1.47
LINC00544-201ENST00000400540 HIST3H2BBQ8N257 126 aa5.84□□□□□ -1.47
LINC00544-201ENST00000400540 FABP2P12104 132 aa5.82□□□□□ -1.48
LINC00544-201ENST00000400540 DEFB116Q30KQ4 102 aa5.82□□□□□ -1.48
LINC00544-201ENST00000400540 RAB37Q96AX2 223 aa5.82□□□□□ -1.48
LINC00544-201ENST00000400540 A0A1B0GV72 72 aa5.81□□□□□ -1.48
LINC00544-201ENST00000400540 H0YGX0 51 aa5.81□□□□□ -1.48
LINC00544-201ENST00000400540 KRTAP19-6Q3LI70 58 aa5.81□□□□□ -1.48
LINC00544-201ENST00000400540 SNCGO76070 127 aa5.8□□□□□ -1.48
LINC00544-201ENST00000400540 COX8AP10176 69 aa5.8□□□□□ -1.48
LINC00544-201ENST00000400540 S100A2P29034 98 aa5.8□□□□□ -1.48
LINC00544-201ENST00000400540 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
LINC00544-201ENST00000400540 A0A0B4J2C4 111 aa5.78□□□□□ -1.48
LINC00544-201ENST00000400540 LINC00472Q9H8W2 130 aa5.77□□□□□ -1.49
LINC00544-201ENST00000400540 TRBV7-4A0A0J9YYF1 115 aa5.76□□□□□ -1.49
LINC00544-201ENST00000400540 ANKRD29Q8N6D5 301 aa5.76□□□□□ -1.49
LINC00544-201ENST00000400540 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
LINC00544-201ENST00000400540 A0A1B0GX51 115 aa5.75□□□□□ -1.49
LINC00544-201ENST00000400540 DLEU1O43261 78 aa5.75□□□□□ -1.49
LINC00544-201ENST00000400540 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
LINC00544-201ENST00000400540 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
LINC00544-201ENST00000400540 KRTAP4-6Q9BYQ5 205 aa5.74□□□□□ -1.49
LINC00544-201ENST00000400540 TRIAP1O43715 76 aa5.73□□□□□ -1.49
LINC00544-201ENST00000400540 C2orf91Q6ZV80 131 aa5.73□□□□□ -1.49
LINC00544-201ENST00000400540 MTURNQ8N3F0 131 aa5.73□□□□□ -1.49
LINC00544-201ENST00000400540 CCKP06307 115 aa5.72□□□□□ -1.49
LINC00544-201ENST00000400540 HIGD1BQ9P298 99 aa5.72□□□□□ -1.49
LINC00544-201ENST00000400540 A0A1B0GVX0 72 aa5.71□□□□□ -1.5
LINC00544-201ENST00000400540 TRACP01848 142 aa5.71□□□□□ -1.5
LINC00544-201ENST00000400540 SPINK7P58062 85 aa5.71□□□□□ -1.5
LINC00544-201ENST00000400540 Q8N9P0 234 aaPredicted RBP5.71□□□□□ -1.5
LINC00544-201ENST00000400540 ZCCHC13Q8WW36 166 aaKnown RBP5.71□□□□□ -1.5
LINC00544-201ENST00000400540 PRO1854Q9UHT4 67 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms