RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 C5orf42Q9H799 3197 aa7.03□□□□□ -1.28
SLC38A1-201ENST00000398637 CENPEQ02224 2701 aa7.03□□□□□ -1.28
SLC38A1-201ENST00000398637 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
SLC38A1-201ENST00000398637 KRTAP10-2P60368 255 aa7□□□□□ -1.29
SLC38A1-201ENST00000398637 NOTCH1P46531 2555 aa6.99□□□□□ -1.29
SLC38A1-201ENST00000398637 STAB2Q8WWQ8 2551 aa6.98□□□□□ -1.29
SLC38A1-201ENST00000398637 ADM2Q7Z4H4 148 aa6.98□□□□□ -1.29
SLC38A1-201ENST00000398637 A0A0A0MQY5 61 aa6.97□□□□□ -1.29
SLC38A1-201ENST00000398637 SPANXA2-OT1Q8N9U9 137 aa6.96□□□□□ -1.3
SLC38A1-201ENST00000398637 EIF4EBP3O60516 100 aaPredicted RBP6.96□□□□□ -1.3
SLC38A1-201ENST00000398637 UNC79Q9P2D8 2635 aa6.96□□□□□ -1.3
SLC38A1-201ENST00000398637 KLKP1Q107X0 134 aa6.95□□□□□ -1.3
SLC38A1-201ENST00000398637 FP248Q71RG6 208 aaPredicted RBP6.94□□□□□ -1.3
SLC38A1-201ENST00000398637 KLK9Q2XQG4 91 aa6.91□□□□□ -1.3
SLC38A1-201ENST00000398637 COL6A5A8TX70 2615 aa6.9□□□□□ -1.3
SLC38A1-201ENST00000398637 Q8N9P0 234 aaPredicted RBP6.9□□□□□ -1.3
SLC38A1-201ENST00000398637 PRO0461Q9UI25 63 aa6.9□□□□□ -1.31
SLC38A1-201ENST00000398637 CHD6Q8TD26 2715 aa6.9□□□□□ -1.31
SLC38A1-201ENST00000398637 DNAH12Q6ZR08 3092 aa6.89□□□□□ -1.31
SLC38A1-201ENST00000398637 Q5W150 140 aa6.86□□□□□ -1.31
SLC38A1-201ENST00000398637 C20orf166-AS1Q96NR2 134 aa6.85□□□□□ -1.31
SLC38A1-201ENST00000398637 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
SLC38A1-201ENST00000398637 KRTAP1-5Q9BYS1 174 aa6.79□□□□□ -1.32
SLC38A1-201ENST00000398637 PCNTO95613 3336 aa6.78□□□□□ -1.32
SLC38A1-201ENST00000398637 MMP24-AS1A0A0U1RRL7 71 aa6.76□□□□□ -1.33
SLC38A1-201ENST00000398637 ROMO1P60602 79 aa6.76□□□□□ -1.33
SLC38A1-201ENST00000398637 SPRR1BP22528 89 aa6.74□□□□□ -1.33
SLC38A1-201ENST00000398637 A8MUU9 505 aa6.74□□□□□ -1.33
SLC38A1-201ENST00000398637 CRYBG3Q68DQ2 2970 aa6.72□□□□□ -1.33
SLC38A1-201ENST00000398637 SPATA8Q6RVD6 105 aa6.71□□□□□ -1.34
SLC38A1-201ENST00000398637 Q8NDZ9 215 aa6.7□□□□□ -1.34
SLC38A1-201ENST00000398637 ITPR2Q14571 2701 aa6.69□□□□□ -1.34
SLC38A1-201ENST00000398637 XIRP2A4UGR9 3374 aa6.69□□□□□ -1.34
SLC38A1-201ENST00000398637 OCR1Q9BZK8 76 aa6.69□□□□□ -1.34
SLC38A1-201ENST00000398637 PANO1I0J062 215 aa6.67□□□□□ -1.34
SLC38A1-201ENST00000398637 A0A0C4DFX4 3053 aa6.67□□□□□ -1.34
SLC38A1-201ENST00000398637 A0A087X002 238 aa6.67□□□□□ -1.34
SLC38A1-201ENST00000398637 IGSF10Q6WRI0 2623 aa6.66□□□□□ -1.34
SLC38A1-201ENST00000398637 Q6ZR54 194 aa6.66□□□□□ -1.34
SLC38A1-201ENST00000398637 Q75L30 129 aa6.64□□□□□ -1.35
SLC38A1-201ENST00000398637 FRYQ5TBA9 3013 aa6.64□□□□□ -1.35
SLC38A1-201ENST00000398637 PRAC1Q96KF2 57 aa6.62□□□□□ -1.35
SLC38A1-201ENST00000398637 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
SLC38A1-201ENST00000398637 KMT2BQ9UMN6 2715 aaPredicted RBP6.62□□□□□ -1.35
SLC38A1-201ENST00000398637 CFAP54Q96N23 3096 aa6.62□□□□□ -1.35
SLC38A1-201ENST00000398637 KRTAP10-8P60410 259 aa6.61□□□□□ -1.35
SLC38A1-201ENST00000398637 A0A1B0GVY2 172 aa6.6□□□□□ -1.35
SLC38A1-201ENST00000398637 LAMA2P24043 3122 aaKnown RBP6.6□□□□□ -1.35
SLC38A1-201ENST00000398637 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
SLC38A1-201ENST00000398637 SPRR1AP35321 89 aa6.59□□□□□ -1.35
SLC38A1-201ENST00000398637 ZNF292O60281 2723 aa6.58□□□□□ -1.36
SLC38A1-201ENST00000398637 TNP1P09430 55 aa6.57□□□□□ -1.36
SLC38A1-201ENST00000398637 KRTAP26-1Q6PEX3 210 aa6.57□□□□□ -1.36
SLC38A1-201ENST00000398637 REV3LO60673 3130 aa6.55□□□□□ -1.36
SLC38A1-201ENST00000398637 GCN1Q92616 2671 aaKnown RBP6.54□□□□□ -1.36
SLC38A1-201ENST00000398637 MKI67P46013 3256 aaKnown RBP6.53□□□□□ -1.36
SLC38A1-201ENST00000398637 KRTAP21-3Q3LHN1 58 aa6.51□□□□□ -1.37
SLC38A1-201ENST00000398637 MGAQ8IWI9 3026 aa6.5□□□□□ -1.37
SLC38A1-201ENST00000398637 P0C880 135 aa6.5□□□□□ -1.37
SLC38A1-201ENST00000398637 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
SLC38A1-201ENST00000398637 C10orf95Q9H7T3 257 aa6.48□□□□□ -1.37
SLC38A1-201ENST00000398637 MAP1AP78559 2803 aaPredicted RBP6.47□□□□□ -1.37
SLC38A1-201ENST00000398637 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
SLC38A1-201ENST00000398637 RPS29P62273 56 aaKnown RBP6.44□□□□□ -1.38
SLC38A1-201ENST00000398637 FLNCQ14315 2725 aa6.43□□□□□ -1.38
SLC38A1-201ENST00000398637 PRUNE2Q8WUY3 3088 aa6.43□□□□□ -1.38
SLC38A1-201ENST00000398637 LAMA3Q16787 3333 aa6.42□□□□□ -1.38
SLC38A1-201ENST00000398637 CELSR3Q9NYQ7 3312 aa6.41□□□□□ -1.38
SLC38A1-201ENST00000398637 TRIOO75962 3097 aa6.41□□□□□ -1.38
SLC38A1-201ENST00000398637 NSD1Q96L73 2696 aaPredicted RBP6.4□□□□□ -1.39
SLC38A1-201ENST00000398637 NBEAL2Q6ZNJ1 2754 aa6.4□□□□□ -1.39
SLC38A1-201ENST00000398637 H3BS24 57 aa6.39□□□□□ -1.39
SLC38A1-201ENST00000398637 Q5VV11 94 aa6.39□□□□□ -1.39
SLC38A1-201ENST00000398637 A8MU10 97 aa6.38□□□□□ -1.39
SLC38A1-201ENST00000398637 BRCA2P51587 3418 aa6.37□□□□□ -1.39
SLC38A1-201ENST00000398637 APCP25054 2843 aa6.35□□□□□ -1.39
SLC38A1-201ENST00000398637 WDFY4Q6ZS81 3184 aa6.35□□□□□ -1.39
SLC38A1-201ENST00000398637 NOTCH2NLQ7Z3S9 236 aa6.35□□□□□ -1.39
SLC38A1-201ENST00000398637 TRANK1O15050 2925 aa6.34□□□□□ -1.39
SLC38A1-201ENST00000398637 UBR5O95071 2799 aaPredicted RBP6.33□□□□□ -1.4
SLC38A1-201ENST00000398637 DSPP15924 2871 aaKnown RBP6.32□□□□□ -1.4
SLC38A1-201ENST00000398637 UTP20O75691 2785 aaKnown RBP6.32□□□□□ -1.4
SLC38A1-201ENST00000398637 FREM2Q5SZK8 3169 aa6.31□□□□□ -1.4
SLC38A1-201ENST00000398637 RANBP2P49792 3224 aaKnown RBP6.3□□□□□ -1.4
SLC38A1-201ENST00000398637 KRTAP13-2Q52LG2 175 aa6.29□□□□□ -1.4
SLC38A1-201ENST00000398637 Q6ZRN7 208 aaPredicted RBP6.28□□□□□ -1.4
SLC38A1-201ENST00000398637 CDH23Q9H251 3354 aa6.26□□□□□ -1.41
SLC38A1-201ENST00000398637 KRTAP16-1A8MUX0 517 aa6.26□□□□□ -1.41
SLC38A1-201ENST00000398637 ASB16-AS1Q495Z4 193 aa6.26□□□□□ -1.41
SLC38A1-201ENST00000398637 KRTAP11-1Q8IUC1 163 aa6.25□□□□□ -1.41
SLC38A1-201ENST00000398637 UNC80Q8N2C7 3258 aa6.23□□□□□ -1.41
SLC38A1-201ENST00000398637 VCANP13611 3396 aa6.22□□□□□ -1.41
SLC38A1-201ENST00000398637 CHD7Q9P2D1 2997 aa6.21□□□□□ -1.41
SLC38A1-201ENST00000398637 CHD9Q3L8U1 2897 aa6.21□□□□□ -1.42
SLC38A1-201ENST00000398637 KRTAP4-16G5E9R7 235 aaPredicted RBP6.21□□□□□ -1.42
SLC38A1-201ENST00000398637 DMXL2Q8TDJ6 3036 aa6.2□□□□□ -1.42
SLC38A1-201ENST00000398637 SZT2Q5T011 3432 aa6.2□□□□□ -1.42
SLC38A1-201ENST00000398637 TENM4Q6N022 2769 aa6.2□□□□□ -1.42
SLC38A1-201ENST00000398637 TENM1Q9UKZ4 2725 aa6.2□□□□□ -1.42
SLC38A1-201ENST00000398637 DNAH14Q0VDD8 3507 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 174.8 ms