RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 Q8N9P0 234 aaPredicted RBP10.24□□□□□ -0.77
CHMP1A-201ENST00000397901 C1orf137Q5JT78 98 aa10.23□□□□□ -0.77
CHMP1A-201ENST00000397901 NDUFS5O43920 106 aa10.23□□□□□ -0.77
CHMP1A-201ENST00000397901 MP68P56378 58 aa10.23□□□□□ -0.77
CHMP1A-201ENST00000397901 ATP11AUNQ6ZP68 121 aa10.22□□□□□ -0.77
CHMP1A-201ENST00000397901 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
CHMP1A-201ENST00000397901 IGLV1-50A0A075B6I6 118 aa10.22□□□□□ -0.77
CHMP1A-201ENST00000397901 KRTAP4-16G5E9R7 235 aaPredicted RBP10.22□□□□□ -0.77
CHMP1A-201ENST00000397901 DNAH10OSP0CZ25 163 aa10.21□□□□□ -0.77
CHMP1A-201ENST00000397901 TLX1NBP0CAT3 122 aa10.21□□□□□ -0.78
CHMP1A-201ENST00000397901 SPANXA2-OT1Q8N9U9 137 aa10.21□□□□□ -0.78
CHMP1A-201ENST00000397901 TNP2Q05952 138 aa10.2□□□□□ -0.78
CHMP1A-201ENST00000397901 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
CHMP1A-201ENST00000397901 LINC00208Q96KT6 92 aa10.2□□□□□ -0.78
CHMP1A-201ENST00000397901 PRR15LQ9BU68 103 aa10.2□□□□□ -0.78
CHMP1A-201ENST00000397901 SPTSSBQ8NFR3 76 aa10.19□□□□□ -0.78
CHMP1A-201ENST00000397901 NOTCH1P46531 2555 aa10.19□□□□□ -0.78
CHMP1A-201ENST00000397901 COL6A5A8TX70 2615 aa10.19□□□□□ -0.78
CHMP1A-201ENST00000397901 PLA2G2DQ9UNK4 145 aa10.18□□□□□ -0.78
CHMP1A-201ENST00000397901 SPRR1AP35321 89 aa10.17□□□□□ -0.78
CHMP1A-201ENST00000397901 PHF5AQ7RTV0 110 aaKnown RBP10.17□□□□□ -0.78
CHMP1A-201ENST00000397901 Q75L30 129 aa10.16□□□□□ -0.78
CHMP1A-201ENST00000397901 NBEAL1Q6ZS30 2694 aa10.16□□□□□ -0.78
CHMP1A-201ENST00000397901 IGLV5-37A0A075B6J1 123 aa10.15□□□□□ -0.78
CHMP1A-201ENST00000397901 HUWE1Q7Z6Z7 4374 aaKnown RBP10.15□□□□□ -0.78
CHMP1A-201ENST00000397901 LCA10Q71F78 164 aa10.15□□□□□ -0.78
CHMP1A-201ENST00000397901 A6NN06 94 aa10.14□□□□□ -0.79
CHMP1A-201ENST00000397901 A0A0G2JQZ4 141 aa10.14□□□□□ -0.79
CHMP1A-201ENST00000397901 A0A1W2PNN7 141 aa10.14□□□□□ -0.79
CHMP1A-201ENST00000397901 H3BPC8 53 aa10.13□□□□□ -0.79
CHMP1A-201ENST00000397901 DNAH1Q9P2D7 4330 aa10.12□□□□□ -0.79
CHMP1A-201ENST00000397901 A6NED7 52 aa10.12□□□□□ -0.79
CHMP1A-201ENST00000397901 LOC101927531A0A1B0GV80 90 aa10.11□□□□□ -0.79
CHMP1A-201ENST00000397901 WFDC13Q8IUB5 93 aa10.1□□□□□ -0.79
CHMP1A-201ENST00000397901 REG3GQ6UW15 175 aa10.09□□□□□ -0.79
CHMP1A-201ENST00000397901 K7EIL1 84 aa10.09□□□□□ -0.79
CHMP1A-201ENST00000397901 LINC00476Q8WZB0 136 aa10.09□□□□□ -0.79
CHMP1A-201ENST00000397901 CDC42SE1Q9NRR8 79 aa10.08□□□□□ -0.8
CHMP1A-201ENST00000397901 H0Y9P7 68 aa10.08□□□□□ -0.8
CHMP1A-201ENST00000397901 DEFB116Q30KQ4 102 aa10.08□□□□□ -0.8
CHMP1A-201ENST00000397901 C7orf65Q6ZTY9 151 aa10.06□□□□□ -0.8
CHMP1A-201ENST00000397901 PRLHP81277 87 aa10.05□□□□□ -0.8
CHMP1A-201ENST00000397901 IGKV2-24A0A0C4DH68 120 aa10.04□□□□□ -0.8
CHMP1A-201ENST00000397901 KRTAP29-1A8MX34 341 aaPredicted RBP10.04□□□□□ -0.8
CHMP1A-201ENST00000397901 IGFL1Q6UW32 110 aa10.04□□□□□ -0.8
CHMP1A-201ENST00000397901 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
CHMP1A-201ENST00000397901 COA5Q86WW8 74 aa10.02□□□□□ -0.8
CHMP1A-201ENST00000397901 DNAH10Q8IVF4 4471 aa10.02□□□□□ -0.81
CHMP1A-201ENST00000397901 A0A096LNI7 61 aa10□□□□□ -0.81
CHMP1A-201ENST00000397901 MGAM2Q2M2H8 2515 aa9.99□□□□□ -0.81
CHMP1A-201ENST00000397901 A0A087WSZ3 146 aa9.99□□□□□ -0.81
CHMP1A-201ENST00000397901 CASC2Q6XLA1 102 aa9.98□□□□□ -0.81
CHMP1A-201ENST00000397901 DNAH9Q9NYC9 4486 aa9.97□□□□□ -0.81
CHMP1A-201ENST00000397901 MOBPQ13875 183 aa9.97□□□□□ -0.81
CHMP1A-201ENST00000397901 LYSTQ99698 3801 aa9.97□□□□□ -0.81
CHMP1A-201ENST00000397901 COL7A1Q02388 2944 aa9.96□□□□□ -0.81
CHMP1A-201ENST00000397901 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.81
CHMP1A-201ENST00000397901 RPL37AP61513 92 aaKnown RBP9.96□□□□□ -0.81
CHMP1A-201ENST00000397901 SRRM2Q9UQ35 2752 aaKnown RBP9.96□□□□□ -0.82
CHMP1A-201ENST00000397901 LINC01558Q9Y6Z2 57 aa9.95□□□□□ -0.82
CHMP1A-201ENST00000397901 KRTAP1-5Q9BYS1 174 aa9.94□□□□□ -0.82
CHMP1A-201ENST00000397901 DYNC2H1Q8NCM8 4307 aaKnown RBP9.94□□□□□ -0.82
CHMP1A-201ENST00000397901 PLAC8Q9NZF1 115 aa9.93□□□□□ -0.82
CHMP1A-201ENST00000397901 CNBPP62633 177 aaKnown RBP9.91□□□□□ -0.82
CHMP1A-201ENST00000397901 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
CHMP1A-201ENST00000397901 CHTF8P0CG12 524 aa9.91□□□□□ -0.82
CHMP1A-201ENST00000397901 KRTAP11-1Q8IUC1 163 aa9.91□□□□□ -0.82
CHMP1A-201ENST00000397901 IGLV8-61A0A075B6I0 122 aa9.9□□□□□ -0.82
CHMP1A-201ENST00000397901 STAB2Q8WWQ8 2551 aa9.89□□□□□ -0.83
CHMP1A-201ENST00000397901 CSMD3Q7Z407 3707 aa9.89□□□□□ -0.83
CHMP1A-201ENST00000397901 C8orf87E5RJ46 101 aa9.89□□□□□ -0.83
CHMP1A-201ENST00000397901 SPAG11AQ6PDA7 123 aa9.88□□□□□ -0.83
CHMP1A-201ENST00000397901 MDFIQ99750 246 aa9.88□□□□□ -0.83
CHMP1A-201ENST00000397901 A8MWP4 228 aa9.87□□□□□ -0.83
CHMP1A-201ENST00000397901 SPINK7P58062 85 aa9.84□□□□□ -0.83
CHMP1A-201ENST00000397901 DNAH7Q8WXX0 4024 aa9.83□□□□□ -0.84
CHMP1A-201ENST00000397901 UBE2DNLQ8IWF7 75 aa9.81□□□□□ -0.84
CHMP1A-201ENST00000397901 PCOTHQ58A44 107 aa9.8□□□□□ -0.84
CHMP1A-201ENST00000397901 APLNQ9ULZ1 77 aa9.8□□□□□ -0.84
CHMP1A-201ENST00000397901 PLECQ15149 4684 aaKnown RBP9.79□□□□□ -0.84
CHMP1A-201ENST00000397901 LINC00472Q9H8W2 130 aa9.79□□□□□ -0.84
CHMP1A-201ENST00000397901 TENM2Q9NT68 2774 aa9.79□□□□□ -0.84
CHMP1A-201ENST00000397901 SPRR1BP22528 89 aa9.78□□□□□ -0.84
CHMP1A-201ENST00000397901 MMP24-AS1A0A0U1RRL7 71 aa9.77□□□□□ -0.85
CHMP1A-201ENST00000397901 LINC00313P59037 77 aa9.77□□□□□ -0.85
CHMP1A-201ENST00000397901 H0Y9J4 135 aa9.76□□□□□ -0.85
CHMP1A-201ENST00000397901 TP53AIP1Q9HCN2 124 aa9.75□□□□□ -0.85
CHMP1A-201ENST00000397901 C14orf177Q52M58 125 aa9.74□□□□□ -0.85
CHMP1A-201ENST00000397901 HRES1P13985 223 aa9.73□□□□□ -0.85
CHMP1A-201ENST00000397901 PANO1I0J062 215 aa9.73□□□□□ -0.85
CHMP1A-201ENST00000397901 Q6ZR54 194 aa9.7□□□□□ -0.86
CHMP1A-201ENST00000397901 PRKDCP78527 4128 aaKnown RBP9.69□□□□□ -0.86
CHMP1A-201ENST00000397901 PRAC1Q96KF2 57 aa9.69□□□□□ -0.86
CHMP1A-201ENST00000397901 IGLV9-49A0A0B4J1Y8 123 aa9.68□□□□□ -0.86
CHMP1A-201ENST00000397901 PLA2G1BP04054 148 aaKnown RBP9.67□□□□□ -0.86
CHMP1A-201ENST00000397901 VPS13DQ5THJ4 4388 aa9.67□□□□□ -0.86
CHMP1A-201ENST00000397901 STARD9Q9P2P6 4700 aa9.67□□□□□ -0.86
CHMP1A-201ENST00000397901 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
CHMP1A-201ENST00000397901 LINC01554Q52M75 96 aa9.66□□□□□ -0.86
CHMP1A-201ENST00000397901 KRTAP13-1Q8IUC0 172 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms