RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PHF5AQ7RTV0 110 aaKnown RBP12.12□□□□□ -0.47
PDLIM2-204ENST00000397760 KRTAP10-1P60331 282 aa12.11□□□□□ -0.47
PDLIM2-204ENST00000397760 SVIPQ8NHG7 77 aa12.11□□□□□ -0.47
PDLIM2-204ENST00000397760 A0A1B0GVY2 172 aa12.11□□□□□ -0.47
PDLIM2-204ENST00000397760 EPM2AB3EWF7 344 aa12.11□□□□□ -0.47
PDLIM2-204ENST00000397760 SPRR1AP35321 89 aa12.1□□□□□ -0.47
PDLIM2-204ENST00000397760 IGLV5-48A0A075B6I7 105 aa12.09□□□□□ -0.47
PDLIM2-204ENST00000397760 J3KT08 172 aa12.09□□□□□ -0.47
PDLIM2-204ENST00000397760 FAM30AQ9NZY2 134 aa12.09□□□□□ -0.47
PDLIM2-204ENST00000397760 KRTAP4-16G5E9R7 235 aaPredicted RBP12.09□□□□□ -0.47
PDLIM2-204ENST00000397760 Q6ZRX8 168 aa12.09□□□□□ -0.47
PDLIM2-204ENST00000397760 PLAC8Q9NZF1 115 aa12.09□□□□□ -0.47
PDLIM2-204ENST00000397760 CYSTM1Q9H1C7 97 aa12.08□□□□□ -0.48
PDLIM2-204ENST00000397760 UBE2BP63146 152 aa12.07□□□□□ -0.48
PDLIM2-204ENST00000397760 Q8N377 158 aa12.06□□□□□ -0.48
PDLIM2-204ENST00000397760 RYR3Q15413 4870 aa12.05□□□□□ -0.48
PDLIM2-204ENST00000397760 DNAH8Q96JB1 4490 aa12.05□□□□□ -0.48
PDLIM2-204ENST00000397760 Q6ZSA8 131 aa12.05□□□□□ -0.48
PDLIM2-204ENST00000397760 ETDCA0A1B0GVM5 59 aa12.03□□□□□ -0.48
PDLIM2-204ENST00000397760 REG3GQ6UW15 175 aa12.03□□□□□ -0.48
PDLIM2-204ENST00000397760 KRTAP11-1Q8IUC1 163 aa12.03□□□□□ -0.48
PDLIM2-204ENST00000397760 NREPQ16612 68 aa12.02□□□□□ -0.49
PDLIM2-204ENST00000397760 CIRBP-AS1Q8TBR5 109 aa12.01□□□□□ -0.49
PDLIM2-204ENST00000397760 KLKP1Q107X0 134 aa12□□□□□ -0.49
PDLIM2-204ENST00000397760 SCXQ7RTU7 201 aa12□□□□□ -0.49
PDLIM2-204ENST00000397760 Q9BRP9 147 aa12□□□□□ -0.49
PDLIM2-204ENST00000397760 C20orf197Q8N268 126 aa11.99□□□□□ -0.49
PDLIM2-204ENST00000397760 PKHD1P08F94 4074 aa11.98□□□□□ -0.49
PDLIM2-204ENST00000397760 DEFB105AQ8NG35 78 aa11.97□□□□□ -0.49
PDLIM2-204ENST00000397760 LRP1BQ9NZR2 4599 aa11.95□□□□□ -0.5
PDLIM2-204ENST00000397760 ERC2-IT1O76042 136 aa11.95□□□□□ -0.5
PDLIM2-204ENST00000397760 BPY2O14599 106 aa11.94□□□□□ -0.5
PDLIM2-204ENST00000397760 IGKV4-1P06312 121 aa11.93□□□□□ -0.5
PDLIM2-204ENST00000397760 DYNC1H1Q14204 4646 aaKnown RBP11.93□□□□□ -0.5
PDLIM2-204ENST00000397760 NDUFC1O43677 76 aa11.92□□□□□ -0.5
PDLIM2-204ENST00000397760 C1orf137Q5JT78 98 aa11.91□□□□□ -0.5
PDLIM2-204ENST00000397760 Q8NBF4 154 aa11.91□□□□□ -0.5
PDLIM2-204ENST00000397760 SPRR4Q96PI1 79 aa11.91□□□□□ -0.5
PDLIM2-204ENST00000397760 H7BZZ5 65 aa11.9□□□□□ -0.5
PDLIM2-204ENST00000397760 PSORS1C2Q9UIG4 136 aa11.9□□□□□ -0.5
PDLIM2-204ENST00000397760 PRLHP81277 87 aa11.9□□□□□ -0.5
PDLIM2-204ENST00000397760 A0A1W2PNM2 257 aa11.89□□□□□ -0.51
PDLIM2-204ENST00000397760 UBE2AP49459 152 aa11.88□□□□□ -0.51
PDLIM2-204ENST00000397760 FAM236DA0A1B0GTK5 79 aa11.87□□□□□ -0.51
PDLIM2-204ENST00000397760 FAM236CP0DP71 79 aa11.87□□□□□ -0.51
PDLIM2-204ENST00000397760 ST20-AS1Q8NBB2 130 aa11.86□□□□□ -0.51
PDLIM2-204ENST00000397760 H0Y9J4 135 aa11.86□□□□□ -0.51
PDLIM2-204ENST00000397760 HIGD2AQ9BW72 106 aa11.83□□□□□ -0.51
PDLIM2-204ENST00000397760 OCR1Q9BZK8 76 aa11.83□□□□□ -0.52
PDLIM2-204ENST00000397760 KRTAP13-1Q8IUC0 172 aa11.82□□□□□ -0.52
PDLIM2-204ENST00000397760 F8WEM9 126 aa11.81□□□□□ -0.52
PDLIM2-204ENST00000397760 ATP5EP56381 51 aaPredicted RBP11.81□□□□□ -0.52
PDLIM2-204ENST00000397760 SMIM29Q86T20 159 aa11.81□□□□□ -0.52
PDLIM2-204ENST00000397760 Q8N9L7 120 aa11.81□□□□□ -0.52
PDLIM2-204ENST00000397760 IGLV8-61A0A075B6I0 122 aa11.8□□□□□ -0.52
PDLIM2-204ENST00000397760 SERP1Q9Y6X1 66 aa11.8□□□□□ -0.52
PDLIM2-204ENST00000397760 TMEM254Q8TBM7 123 aa11.79□□□□□ -0.52
PDLIM2-204ENST00000397760 SNURFQ9Y675 71 aa11.79□□□□□ -0.52
PDLIM2-204ENST00000397760 APOBP04114 4563 aaKnown RBP11.78□□□□□ -0.52
PDLIM2-204ENST00000397760 IGLV7-43P04211 117 aa11.77□□□□□ -0.52
PDLIM2-204ENST00000397760 ZNF861PO60384 105 aa11.76□□□□□ -0.53
PDLIM2-204ENST00000397760 OXTP01178 125 aa11.76□□□□□ -0.53
PDLIM2-204ENST00000397760 SMR3BP02814 79 aaPredicted RBP11.74□□□□□ -0.53
PDLIM2-204ENST00000397760 A0A0U1RQV1 116 aa11.73□□□□□ -0.53
PDLIM2-204ENST00000397760 DSCR10P59022 87 aa11.72□□□□□ -0.53
PDLIM2-204ENST00000397760 IGFL1Q6UW32 110 aa11.71□□□□□ -0.54
PDLIM2-204ENST00000397760 SPRR1BP22528 89 aa11.7□□□□□ -0.54
PDLIM2-204ENST00000397760 RPL37AP61513 92 aaKnown RBP11.69□□□□□ -0.54
PDLIM2-204ENST00000397760 CDK2AP2O75956 126 aa11.66□□□□□ -0.54
PDLIM2-204ENST00000397760 VPS13BQ7Z7G8 4022 aa11.66□□□□□ -0.54
PDLIM2-204ENST00000397760 Q5XG85 94 aa11.64□□□□□ -0.55
PDLIM2-204ENST00000397760 ZNF706Q9Y5V0 76 aaPredicted RBP11.64□□□□□ -0.55
PDLIM2-204ENST00000397760 K7EQZ3 153 aa11.63□□□□□ -0.55
PDLIM2-204ENST00000397760 EPPK1P58107 5090 aaKnown RBP11.63□□□□□ -0.55
PDLIM2-204ENST00000397760 C5orf47Q569G3 176 aa11.63□□□□□ -0.55
PDLIM2-204ENST00000397760 HCG22E2RYF7 251 aa11.62□□□□□ -0.55
PDLIM2-204ENST00000397760 SRRM2Q9UQ35 2752 aaKnown RBP11.61□□□□□ -0.55
PDLIM2-204ENST00000397760 SMIM26A0A096LP01 95 aa11.6□□□□□ -0.55
PDLIM2-204ENST00000397760 FAT1Q14517 4588 aa11.59□□□□□ -0.55
PDLIM2-204ENST00000397760 A0A087WSZ3 146 aa11.58□□□□□ -0.56
PDLIM2-204ENST00000397760 LINC00483Q53H64 154 aa11.58□□□□□ -0.56
PDLIM2-204ENST00000397760 HSPG2P98160 4391 aa11.56□□□□□ -0.56
PDLIM2-204ENST00000397760 KRTAP10-4P60372 401 aaPredicted RBP11.56□□□□□ -0.56
PDLIM2-204ENST00000397760 ANAPC11Q9NYG5 84 aa11.56□□□□□ -0.56
PDLIM2-204ENST00000397760 RYR1P21817 5038 aa11.55□□□□□ -0.56
PDLIM2-204ENST00000397760 FAM229AH3BQW9 127 aa11.55□□□□□ -0.56
PDLIM2-204ENST00000397760 SPINK6Q6UWN8 80 aa11.54□□□□□ -0.56
PDLIM2-204ENST00000397760 ZCCHC13Q8WW36 166 aaKnown RBP11.54□□□□□ -0.56
PDLIM2-204ENST00000397760 C4orf26Q17RF5 130 aa11.53□□□□□ -0.56
PDLIM2-204ENST00000397760 PLA2G1BP04054 148 aaKnown RBP11.52□□□□□ -0.57
PDLIM2-204ENST00000397760 A0A0G2JQZ4 141 aa11.51□□□□□ -0.57
PDLIM2-204ENST00000397760 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
PDLIM2-204ENST00000397760 Q5VSD8 79 aa11.49□□□□□ -0.57
PDLIM2-204ENST00000397760 LINC00472Q9H8W2 130 aa11.48□□□□□ -0.57
PDLIM2-204ENST00000397760 KIAA1109Q2LD37 5005 aa11.48□□□□□ -0.57
PDLIM2-204ENST00000397760 KRTAP29-1A8MX34 341 aaPredicted RBP11.47□□□□□ -0.57
PDLIM2-204ENST00000397760 PRR15Q8IV56 129 aa11.46□□□□□ -0.57
PDLIM2-204ENST00000397760 A8MWP4 228 aa11.46□□□□□ -0.58
PDLIM2-204ENST00000397760 NDUFB1O75438 58 aa11.45□□□□□ -0.58
PDLIM2-204ENST00000397760 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms