RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FAM240AA0A1B0GVK7 77 aa8.75□□□□□ -1.01
SEC13-208ENST00000397109 KRTAP1-4P0C5Y4 121 aa8.75□□□□□ -1.01
SEC13-208ENST00000397109 JMJD7-PLA2G4BH0Y9G9 81 aa8.74□□□□□ -1.01
SEC13-208ENST00000397109 ACYP1P07311 99 aa8.74□□□□□ -1.01
SEC13-208ENST00000397109 OBSCN-AS1Q96MR7 158 aa8.74□□□□□ -1.01
SEC13-208ENST00000397109 PRYO14603 147 aa8.73□□□□□ -1.01
SEC13-208ENST00000397109 UBE2AP49459 152 aa8.73□□□□□ -1.01
SEC13-208ENST00000397109 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.73□□□□□ -1.01
SEC13-208ENST00000397109 SPRR1AP35321 89 aa8.7□□□□□ -1.02
SEC13-208ENST00000397109 KRTAP13-1Q8IUC0 172 aa8.7□□□□□ -1.02
SEC13-208ENST00000397109 C21orf62-AS1Q17RA5 79 aa8.69□□□□□ -1.02
SEC13-208ENST00000397109 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
SEC13-208ENST00000397109 DHRS4-AS1Q9P1J3 65 aa8.68□□□□□ -1.02
SEC13-208ENST00000397109 KRTAP4-16G5E9R7 235 aaPredicted RBP8.67□□□□□ -1.02
SEC13-208ENST00000397109 FAM19A1Q7Z5A9 133 aa8.67□□□□□ -1.02
SEC13-208ENST00000397109 CDIP1Q9H305 208 aa8.66□□□□□ -1.02
SEC13-208ENST00000397109 CRYGAP11844 174 aa8.65□□□□□ -1.02
SEC13-208ENST00000397109 Q6ZQY7 126 aa8.65□□□□□ -1.02
SEC13-208ENST00000397109 PDE6GP18545 87 aa8.64□□□□□ -1.03
SEC13-208ENST00000397109 PRLHP81277 87 aa8.64□□□□□ -1.03
SEC13-208ENST00000397109 Q6ZRX8 168 aa8.64□□□□□ -1.03
SEC13-208ENST00000397109 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
SEC13-208ENST00000397109 B5MCH6 92 aa8.63□□□□□ -1.03
SEC13-208ENST00000397109 RBM3P98179 157 aaKnown RBP8.62□□□□□ -1.03
SEC13-208ENST00000397109 FAM229BQ4G0N7 80 aa8.62□□□□□ -1.03
SEC13-208ENST00000397109 A0A087X002 238 aa8.61□□□□□ -1.03
SEC13-208ENST00000397109 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
SEC13-208ENST00000397109 SCGB1A1P11684 91 aa8.6□□□□□ -1.03
SEC13-208ENST00000397109 LAMTOR3Q9UHA4 124 aa8.6□□□□□ -1.03
SEC13-208ENST00000397109 LOC110117498A0A087WWA1 95 aa8.59□□□□□ -1.03
SEC13-208ENST00000397109 CCKP06307 115 aa8.59□□□□□ -1.03
SEC13-208ENST00000397109 HIGD2AQ9BW72 106 aa8.59□□□□□ -1.03
SEC13-208ENST00000397109 C14orf132Q9NPU4 83 aa8.59□□□□□ -1.03
SEC13-208ENST00000397109 ANAPC11Q9NYG5 84 aa8.59□□□□□ -1.03
SEC13-208ENST00000397109 GAGE2AQ6NT46 116 aa8.57□□□□□ -1.04
SEC13-208ENST00000397109 DSCR8Q96T75 97 aa8.57□□□□□ -1.04
SEC13-208ENST00000397109 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
SEC13-208ENST00000397109 LRP2P98164 4655 aa8.56□□□□□ -1.04
SEC13-208ENST00000397109 NDUFV3P56181 108 aaKnown RBP8.56□□□□□ -1.04
SEC13-208ENST00000397109 KRTAP13-2Q52LG2 175 aa8.56□□□□□ -1.04
SEC13-208ENST00000397109 ZNF706Q9Y5V0 76 aaPredicted RBP8.56□□□□□ -1.04
SEC13-208ENST00000397109 IGLV5-48A0A075B6I7 105 aa8.55□□□□□ -1.04
SEC13-208ENST00000397109 LINC00643Q86TS7 51 aa8.55□□□□□ -1.04
SEC13-208ENST00000397109 Q9BRP9 147 aa8.55□□□□□ -1.04
SEC13-208ENST00000397109 Q6Q795 121 aa8.53□□□□□ -1.04
SEC13-208ENST00000397109 Q6ZQT0 140 aa8.53□□□□□ -1.04
SEC13-208ENST00000397109 SMCR5Q8TEV8 140 aa8.53□□□□□ -1.04
SEC13-208ENST00000397109 SPRR4Q96PI1 79 aa8.53□□□□□ -1.04
SEC13-208ENST00000397109 IMUPQ9GZP8 106 aa8.53□□□□□ -1.04
SEC13-208ENST00000397109 TRBV7-4A0A0J9YYF1 115 aa8.52□□□□□ -1.05
SEC13-208ENST00000397109 A0A1B0GW54 56 aa8.51□□□□□ -1.05
SEC13-208ENST00000397109 Q8N377 158 aa8.51□□□□□ -1.05
SEC13-208ENST00000397109 MT-ATP8P03928 68 aa8.51□□□□□ -1.05
SEC13-208ENST00000397109 LINC01547P58512 204 aaPredicted RBP8.51□□□□□ -1.05
SEC13-208ENST00000397109 PRR4Q16378 134 aa8.51□□□□□ -1.05
SEC13-208ENST00000397109 LINC00304Q8N9R0 145 aa8.51□□□□□ -1.05
SEC13-208ENST00000397109 TRBV7-7A0A0K0K1E9 115 aa8.48□□□□□ -1.05
SEC13-208ENST00000397109 ERC2-IT1O76042 136 aa8.48□□□□□ -1.05
SEC13-208ENST00000397109 C3orf22Q8N5N4 141 aa8.47□□□□□ -1.05
SEC13-208ENST00000397109 LINC00846Q9NV44 126 aa8.47□□□□□ -1.05
SEC13-208ENST00000397109 UBL5Q9BZL1 73 aa8.46□□□□□ -1.05
SEC13-208ENST00000397109 SPAG11AQ6PDA7 123 aa8.45□□□□□ -1.06
SEC13-208ENST00000397109 DEFB105AQ8NG35 78 aa8.45□□□□□ -1.06
SEC13-208ENST00000397109 SPRR1BP22528 89 aa8.45□□□□□ -1.06
SEC13-208ENST00000397109 PCP4P48539 62 aa8.45□□□□□ -1.06
SEC13-208ENST00000397109 LINC00483Q53H64 154 aa8.45□□□□□ -1.06
SEC13-208ENST00000397109 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
SEC13-208ENST00000397109 Q6JHZ5 121 aa8.44□□□□□ -1.06
SEC13-208ENST00000397109 A0A1B0GV72 72 aa8.43□□□□□ -1.06
SEC13-208ENST00000397109 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
SEC13-208ENST00000397109 ST20-AS1Q8NBB2 130 aa8.42□□□□□ -1.06
SEC13-208ENST00000397109 LPAP08519 4548 aa8.41□□□□□ -1.06
SEC13-208ENST00000397109 IGLV8-61A0A075B6I0 122 aa8.4□□□□□ -1.06
SEC13-208ENST00000397109 F8WEM9 126 aa8.4□□□□□ -1.06
SEC13-208ENST00000397109 SMIM29Q86T20 159 aa8.39□□□□□ -1.07
SEC13-208ENST00000397109 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
SEC13-208ENST00000397109 Q8NBF4 154 aa8.38□□□□□ -1.07
SEC13-208ENST00000397109 IGLV9-49A0A0B4J1Y8 123 aa8.36□□□□□ -1.07
SEC13-208ENST00000397109 SPINK1P00995 79 aa8.36□□□□□ -1.07
SEC13-208ENST00000397109 RETNLBQ9BQ08 111 aa8.36□□□□□ -1.07
SEC13-208ENST00000397109 CXCL6P80162 114 aa8.35□□□□□ -1.07
SEC13-208ENST00000397109 MOBPQ13875 183 aa8.35□□□□□ -1.07
SEC13-208ENST00000397109 RNF213Q63HN8 5207 aa8.34□□□□□ -1.07
SEC13-208ENST00000397109 Q6ZVQ6 151 aa8.34□□□□□ -1.07
SEC13-208ENST00000397109 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
SEC13-208ENST00000397109 A0A1W2PNM2 257 aa8.31□□□□□ -1.08
SEC13-208ENST00000397109 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
SEC13-208ENST00000397109 NREPQ16612 68 aa8.31□□□□□ -1.08
SEC13-208ENST00000397109 TPRXLQ17RH7 258 aa8.31□□□□□ -1.08
SEC13-208ENST00000397109 C9orf153Q5TBE3 101 aa8.31□□□□□ -1.08
SEC13-208ENST00000397109 FP248Q71RG6 208 aaPredicted RBP8.31□□□□□ -1.08
SEC13-208ENST00000397109 IGKV3D-7A0A0C4DH55 119 aa8.29□□□□□ -1.08
SEC13-208ENST00000397109 IGFL1Q6UW32 110 aa8.28□□□□□ -1.08
SEC13-208ENST00000397109 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
SEC13-208ENST00000397109 ANAPC13Q9BS18 74 aa8.26□□□□□ -1.09
SEC13-208ENST00000397109 FAM236AA0A1B0GUQ0 79 aa8.25□□□□□ -1.09
SEC13-208ENST00000397109 FAM236BA0A1B0GV22 79 aa8.25□□□□□ -1.09
SEC13-208ENST00000397109 ATOX1O00244 68 aa8.23□□□□□ -1.09
SEC13-208ENST00000397109 BPY2O14599 106 aa8.22□□□□□ -1.09
SEC13-208ENST00000397109 LIMD2Q9BT23 127 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms