RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 NDUFB1O75438 58 aa15.3■□□□□ 0.04
CSNK1E-203ENST00000396832 DNAH10Q8IVF4 4471 aa15.28■□□□□ 0.04
CSNK1E-203ENST00000396832 WFDC13Q8IUB5 93 aa15.27■□□□□ 0.04
CSNK1E-203ENST00000396832 PLA2G2DQ9UNK4 145 aa15.27■□□□□ 0.04
CSNK1E-203ENST00000396832 CMYA5Q8N3K9 4069 aa15.26■□□□□ 0.03
CSNK1E-203ENST00000396832 MP68P56378 58 aa15.24■□□□□ 0.03
CSNK1E-203ENST00000396832 LINC00476Q8WZB0 136 aa15.24■□□□□ 0.03
CSNK1E-203ENST00000396832 LINC00588Q9Y4M8 146 aa15.24■□□□□ 0.03
CSNK1E-203ENST00000396832 TLX1NBP0CAT3 122 aa15.24■□□□□ 0.03
CSNK1E-203ENST00000396832 MRPL55Q7Z7F7 128 aaKnown RBP15.24■□□□□ 0.03
CSNK1E-203ENST00000396832 KRTAP24-1Q3LI83 254 aa15.22■□□□□ 0.03
CSNK1E-203ENST00000396832 LINC00208Q96KT6 92 aa15.22■□□□□ 0.03
CSNK1E-203ENST00000396832 B9D2Q9BPU9 175 aa15.22■□□□□ 0.03
CSNK1E-203ENST00000396832 IGKV2-24A0A0C4DH68 120 aa15.21■□□□□ 0.03
CSNK1E-203ENST00000396832 DNAH10OSP0CZ25 163 aa15.21■□□□□ 0.03
CSNK1E-203ENST00000396832 IGLV5-37A0A075B6J1 123 aa15.21■□□□□ 0.03
CSNK1E-203ENST00000396832 A8MU10 97 aa15.2■□□□□ 0.02
CSNK1E-203ENST00000396832 PRLHP81277 87 aa15.2■□□□□ 0.02
CSNK1E-203ENST00000396832 MGAM2Q2M2H8 2515 aa15.19■□□□□ 0.02
CSNK1E-203ENST00000396832 Q5VV11 94 aa15.18■□□□□ 0.02
CSNK1E-203ENST00000396832 IGFL1Q6UW32 110 aa15.18■□□□□ 0.02
CSNK1E-203ENST00000396832 DNAH1Q9P2D7 4330 aa15.14■□□□□ 0.01
CSNK1E-203ENST00000396832 RPL37AP61513 92 aaKnown RBP15.14■□□□□ 0.01
CSNK1E-203ENST00000396832 A0A087WSZ3 146 aa15.13■□□□□ 0.01
CSNK1E-203ENST00000396832 REG3GQ6UW15 175 aa15.13■□□□□ 0.01
CSNK1E-203ENST00000396832 TENM2Q9NT68 2774 aa15.13■□□□□ 0.01
CSNK1E-203ENST00000396832 COL7A1Q02388 2944 aa15.11■□□□□ 0.01
CSNK1E-203ENST00000396832 Q8N9P0 234 aaPredicted RBP15.09■□□□□ 0.01
CSNK1E-203ENST00000396832 H0Y9P7 68 aa15.09■□□□□ 0.01
CSNK1E-203ENST00000396832 STAB2Q8WWQ8 2551 aa15.09■□□□□ 0.01
CSNK1E-203ENST00000396832 KRTAP29-1A8MX34 341 aaPredicted RBP15.08■□□□□ 0.01
CSNK1E-203ENST00000396832 CHKB-CPT1BH3BT56 60 aa15.08■□□□□ 0.01
CSNK1E-203ENST00000396832 SPANXA2-OT1Q8N9U9 137 aa15.07■□□□□ 0
CSNK1E-203ENST00000396832 A0A096LNI7 61 aa15.05■□□□□ 0
CSNK1E-203ENST00000396832 LIMD2Q9BT23 127 aa15.05■□□□□ -0
CSNK1E-203ENST00000396832 CASC2Q6XLA1 102 aa15.04■□□□□ -0
CSNK1E-203ENST00000396832 UBE2AP49459 152 aa15.03■□□□□ -0
CSNK1E-203ENST00000396832 PRR15LQ9BU68 103 aa15.02■□□□□ -0
CSNK1E-203ENST00000396832 H3BPC8 53 aa15.01□□□□□ -0.01
CSNK1E-203ENST00000396832 DNAH9Q9NYC9 4486 aa15□□□□□ -0.01
CSNK1E-203ENST00000396832 C16orf90A8MZG2 172 aa15□□□□□ -0.01
CSNK1E-203ENST00000396832 CHTF8P0CG12 524 aa15□□□□□ -0.01
CSNK1E-203ENST00000396832 HUWE1Q7Z6Z7 4374 aaKnown RBP14.99□□□□□ -0.01
CSNK1E-203ENST00000396832 IGLV8-61A0A075B6I0 122 aa14.98□□□□□ -0.01
CSNK1E-203ENST00000396832 CNBPP62633 177 aaKnown RBP14.98□□□□□ -0.01
CSNK1E-203ENST00000396832 KRTAP1-5Q9BYS1 174 aa14.97□□□□□ -0.01
CSNK1E-203ENST00000396832 DNAH3Q8TD57 4116 aa14.97□□□□□ -0.01
CSNK1E-203ENST00000396832 CD164Q04900 197 aa14.96□□□□□ -0.01
CSNK1E-203ENST00000396832 KRTAP11-1Q8IUC1 163 aa14.96□□□□□ -0.02
CSNK1E-203ENST00000396832 C9orf163Q8N9P6 203 aa14.95□□□□□ -0.02
CSNK1E-203ENST00000396832 SPTSSBQ8NFR3 76 aa14.93□□□□□ -0.02
CSNK1E-203ENST00000396832 PHF5AQ7RTV0 110 aaKnown RBP14.92□□□□□ -0.02
CSNK1E-203ENST00000396832 A8MWP4 228 aa14.9□□□□□ -0.02
CSNK1E-203ENST00000396832 LCA10Q71F78 164 aa14.9□□□□□ -0.02
CSNK1E-203ENST00000396832 DNAH7Q8WXX0 4024 aa14.89□□□□□ -0.03
CSNK1E-203ENST00000396832 COA5Q86WW8 74 aa14.88□□□□□ -0.03
CSNK1E-203ENST00000396832 Q75L30 129 aa14.87□□□□□ -0.03
CSNK1E-203ENST00000396832 A6NED7 52 aa14.86□□□□□ -0.03
CSNK1E-203ENST00000396832 KTN1-AS1Q86SY8 53 aa14.86□□□□□ -0.03
CSNK1E-203ENST00000396832 LINC00472Q9H8W2 130 aa14.86□□□□□ -0.03
CSNK1E-203ENST00000396832 LOC101927531A0A1B0GV80 90 aa14.83□□□□□ -0.04
CSNK1E-203ENST00000396832 ATP11AUNQ6ZP68 121 aa14.83□□□□□ -0.04
CSNK1E-203ENST00000396832 IGLV7-46A0A075B6I9 117 aa14.82□□□□□ -0.04
CSNK1E-203ENST00000396832 H0Y9J4 135 aa14.81□□□□□ -0.04
CSNK1E-203ENST00000396832 PCOTHQ58A44 107 aa14.77□□□□□ -0.05
CSNK1E-203ENST00000396832 MMP24-AS1A0A0U1RRL7 71 aa14.76□□□□□ -0.05
CSNK1E-203ENST00000396832 K7EIL1 84 aa14.76□□□□□ -0.05
CSNK1E-203ENST00000396832 UBE2DNLQ8IWF7 75 aa14.76□□□□□ -0.05
CSNK1E-203ENST00000396832 RBM12B-AS1Q9P1G2 102 aa14.73□□□□□ -0.05
CSNK1E-203ENST00000396832 A6NN06 94 aa14.71□□□□□ -0.05
CSNK1E-203ENST00000396832 SPRR1BP22528 89 aa14.7□□□□□ -0.06
CSNK1E-203ENST00000396832 SPAG11AQ6PDA7 123 aa14.7□□□□□ -0.06
CSNK1E-203ENST00000396832 CDC42SE1Q9NRR8 79 aa14.7□□□□□ -0.06
CSNK1E-203ENST00000396832 PANO1I0J062 215 aa14.69□□□□□ -0.06
CSNK1E-203ENST00000396832 IGLV9-49A0A0B4J1Y8 123 aa14.68□□□□□ -0.06
CSNK1E-203ENST00000396832 NDUFS5O43920 106 aa14.67□□□□□ -0.06
CSNK1E-203ENST00000396832 MDFIQ99750 246 aa14.67□□□□□ -0.06
CSNK1E-203ENST00000396832 LINC01558Q9Y6Z2 57 aa14.66□□□□□ -0.06
CSNK1E-203ENST00000396832 FRAS1Q86XX4 4008 aa14.61□□□□□ -0.07
CSNK1E-203ENST00000396832 PLAC8Q9NZF1 115 aa14.61□□□□□ -0.07
CSNK1E-203ENST00000396832 TP53AIP1Q9HCN2 124 aa14.6□□□□□ -0.07
CSNK1E-203ENST00000396832 MOBPQ13875 183 aa14.59□□□□□ -0.07
CSNK1E-203ENST00000396832 PLECQ15149 4684 aaKnown RBP14.56□□□□□ -0.08
CSNK1E-203ENST00000396832 ASB16-AS1Q495Z4 193 aa14.56□□□□□ -0.08
CSNK1E-203ENST00000396832 SPINK7P58062 85 aa14.55□□□□□ -0.08
CSNK1E-203ENST00000396832 Q6ZR54 194 aa14.55□□□□□ -0.08
CSNK1E-203ENST00000396832 Q96NJ1 140 aa14.54□□□□□ -0.08
CSNK1E-203ENST00000396832 HRES1P13985 223 aa14.54□□□□□ -0.08
CSNK1E-203ENST00000396832 C8orf17Q9NRJ1 99 aa14.52□□□□□ -0.09
CSNK1E-203ENST00000396832 ANAPC11Q9NYG5 84 aa14.52□□□□□ -0.09
CSNK1E-203ENST00000396832 C7orf65Q6ZTY9 151 aa14.51□□□□□ -0.09
CSNK1E-203ENST00000396832 APLNQ9ULZ1 77 aa14.48□□□□□ -0.09
CSNK1E-203ENST00000396832 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.48□□□□□ -0.09
CSNK1E-203ENST00000396832 IGHV6-1A0A0B4J1U7 121 aa14.46□□□□□ -0.09
CSNK1E-203ENST00000396832 C14orf177Q52M58 125 aa14.46□□□□□ -0.09
CSNK1E-203ENST00000396832 DNHD1Q96M86 4753 aa14.44□□□□□ -0.1
CSNK1E-203ENST00000396832 A0A1B0GVX0 72 aa14.39□□□□□ -0.11
CSNK1E-203ENST00000396832 KRTAP13-1Q8IUC0 172 aa14.39□□□□□ -0.11
CSNK1E-203ENST00000396832 MRPL34Q9BQ48 92 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-203ENST00000396832 A0A087X002 238 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms