RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 SRRM2Q9UQ35 2752 aaKnown RBP6.3□□□□□ -1.4
TRIM39-203ENST00000396547 IGKV2-24A0A0C4DH68 120 aa6.3□□□□□ -1.4
TRIM39-203ENST00000396547 IGLV1-50A0A075B6I6 118 aa6.3□□□□□ -1.4
TRIM39-203ENST00000396547 DEFB131BA0A096LNP1 70 aa6.3□□□□□ -1.4
TRIM39-203ENST00000396547 PRLHP81277 87 aa6.3□□□□□ -1.4
TRIM39-203ENST00000396547 MP68P56378 58 aa6.29□□□□□ -1.4
TRIM39-203ENST00000396547 DNAH9Q9NYC9 4486 aa6.29□□□□□ -1.4
TRIM39-203ENST00000396547 SPTSSBQ8NFR3 76 aa6.27□□□□□ -1.41
TRIM39-203ENST00000396547 RBM12B-AS1Q9P1G2 102 aa6.27□□□□□ -1.41
TRIM39-203ENST00000396547 Q1T7F1 81 aa6.27□□□□□ -1.41
TRIM39-203ENST00000396547 ZCCHC13Q8WW36 166 aaKnown RBP6.27□□□□□ -1.41
TRIM39-203ENST00000396547 CHKB-CPT1BH3BT56 60 aa6.26□□□□□ -1.41
TRIM39-203ENST00000396547 KRTAP10-11P60412 298 aa6.26□□□□□ -1.41
TRIM39-203ENST00000396547 TNP2Q05952 138 aa6.26□□□□□ -1.41
TRIM39-203ENST00000396547 PRKDCP78527 4128 aaKnown RBP6.26□□□□□ -1.41
TRIM39-203ENST00000396547 IGFL1Q6UW32 110 aa6.26□□□□□ -1.41
TRIM39-203ENST00000396547 KRTAP7-1Q8IUC3 87 aa6.26□□□□□ -1.41
TRIM39-203ENST00000396547 SPRR4Q96PI1 79 aa6.26□□□□□ -1.41
TRIM39-203ENST00000396547 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
TRIM39-203ENST00000396547 B9D2Q9BPU9 175 aa6.25□□□□□ -1.41
TRIM39-203ENST00000396547 KRTAP4-16G5E9R7 235 aaPredicted RBP6.25□□□□□ -1.41
TRIM39-203ENST00000396547 REG3GQ6UW15 175 aa6.25□□□□□ -1.41
TRIM39-203ENST00000396547 H0Y9P7 68 aa6.24□□□□□ -1.41
TRIM39-203ENST00000396547 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
TRIM39-203ENST00000396547 LCE6AA0A183 80 aa6.24□□□□□ -1.41
TRIM39-203ENST00000396547 K7EIL1 84 aa6.24□□□□□ -1.41
TRIM39-203ENST00000396547 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
TRIM39-203ENST00000396547 H3BS24 57 aa6.22□□□□□ -1.41
TRIM39-203ENST00000396547 CSMD3Q7Z407 3707 aa6.22□□□□□ -1.41
TRIM39-203ENST00000396547 H0Y9J4 135 aa6.22□□□□□ -1.41
TRIM39-203ENST00000396547 UBE2AP49459 152 aa6.22□□□□□ -1.41
TRIM39-203ENST00000396547 CASC2Q6XLA1 102 aa6.22□□□□□ -1.41
TRIM39-203ENST00000396547 NDUFB1O75438 58 aa6.22□□□□□ -1.41
TRIM39-203ENST00000396547 SPRR1AP35321 89 aa6.21□□□□□ -1.42
TRIM39-203ENST00000396547 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
TRIM39-203ENST00000396547 A0A1B0GW54 56 aa6.2□□□□□ -1.42
TRIM39-203ENST00000396547 CYP4F30PQ9H0H9 118 aa6.2□□□□□ -1.42
TRIM39-203ENST00000396547 HUWE1Q7Z6Z7 4374 aaKnown RBP6.19□□□□□ -1.42
TRIM39-203ENST00000396547 H3BNG1 76 aa6.19□□□□□ -1.42
TRIM39-203ENST00000396547 Q5VV11 94 aa6.19□□□□□ -1.42
TRIM39-203ENST00000396547 LINC00588Q9Y4M8 146 aa6.19□□□□□ -1.42
TRIM39-203ENST00000396547 DNAH7Q8WXX0 4024 aa6.19□□□□□ -1.42
TRIM39-203ENST00000396547 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
TRIM39-203ENST00000396547 A6NED7 52 aa6.18□□□□□ -1.42
TRIM39-203ENST00000396547 TLX1NBP0CAT3 122 aa6.18□□□□□ -1.42
TRIM39-203ENST00000396547 COL7A1Q02388 2944 aa6.17□□□□□ -1.42
TRIM39-203ENST00000396547 DNAH10OSP0CZ25 163 aa6.17□□□□□ -1.42
TRIM39-203ENST00000396547 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
TRIM39-203ENST00000396547 CHTF8P0CG12 524 aa6.16□□□□□ -1.42
TRIM39-203ENST00000396547 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
TRIM39-203ENST00000396547 KTN1-AS1Q86SY8 53 aa6.16□□□□□ -1.42
TRIM39-203ENST00000396547 CNBPP62633 177 aaKnown RBP6.15□□□□□ -1.42
TRIM39-203ENST00000396547 PHF5AQ7RTV0 110 aaKnown RBP6.15□□□□□ -1.43
TRIM39-203ENST00000396547 IGLV5-37A0A075B6J1 123 aa6.14□□□□□ -1.43
TRIM39-203ENST00000396547 C16orf90A8MZG2 172 aa6.14□□□□□ -1.43
TRIM39-203ENST00000396547 NDUFS5O43920 106 aa6.14□□□□□ -1.43
TRIM39-203ENST00000396547 SPAG11AQ6PDA7 123 aa6.14□□□□□ -1.43
TRIM39-203ENST00000396547 COA5Q86WW8 74 aa6.13□□□□□ -1.43
TRIM39-203ENST00000396547 KRTAP29-1A8MX34 341 aaPredicted RBP6.12□□□□□ -1.43
TRIM39-203ENST00000396547 DNAH1Q9P2D7 4330 aa6.12□□□□□ -1.43
TRIM39-203ENST00000396547 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
TRIM39-203ENST00000396547 LIMD2Q9BT23 127 aa6.12□□□□□ -1.43
TRIM39-203ENST00000396547 DNAH6Q9C0G6 4158 aa6.11□□□□□ -1.43
TRIM39-203ENST00000396547 C8orf87E5RJ46 101 aa6.11□□□□□ -1.43
TRIM39-203ENST00000396547 IGLV9-49A0A0B4J1Y8 123 aa6.11□□□□□ -1.43
TRIM39-203ENST00000396547 A8MWP4 228 aa6.1□□□□□ -1.43
TRIM39-203ENST00000396547 LCA10Q71F78 164 aa6.1□□□□□ -1.43
TRIM39-203ENST00000396547 ALMS1Q8TCU4 4167 aa6.1□□□□□ -1.43
TRIM39-203ENST00000396547 TENM2Q9NT68 2774 aa6.09□□□□□ -1.43
TRIM39-203ENST00000396547 SPANXA2-OT1Q8N9U9 137 aa6.07□□□□□ -1.44
TRIM39-203ENST00000396547 WWC2-AS2Q96NR7 200 aa6.07□□□□□ -1.44
TRIM39-203ENST00000396547 LINC00472Q9H8W2 130 aa6.07□□□□□ -1.44
TRIM39-203ENST00000396547 TGP01266 2768 aa6.06□□□□□ -1.44
TRIM39-203ENST00000396547 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
TRIM39-203ENST00000396547 STAB2Q8WWQ8 2551 aa6.06□□□□□ -1.44
TRIM39-203ENST00000396547 C9orf163Q8N9P6 203 aa6.06□□□□□ -1.44
TRIM39-203ENST00000396547 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
TRIM39-203ENST00000396547 MMP24-AS1A0A0U1RRL7 71 aa6.05□□□□□ -1.44
TRIM39-203ENST00000396547 DNAH10Q8IVF4 4471 aa6.05□□□□□ -1.44
TRIM39-203ENST00000396547 IGLV8-61A0A075B6I0 122 aa6.04□□□□□ -1.44
TRIM39-203ENST00000396547 H3BPC8 53 aa6.04□□□□□ -1.44
TRIM39-203ENST00000396547 UBE2DNLQ8IWF7 75 aa6.04□□□□□ -1.44
TRIM39-203ENST00000396547 PRR26Q8N8Z3 221 aa6.03□□□□□ -1.44
TRIM39-203ENST00000396547 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
TRIM39-203ENST00000396547 LOC101927531A0A1B0GV80 90 aa6.02□□□□□ -1.45
TRIM39-203ENST00000396547 ANAPC11Q9NYG5 84 aa6.02□□□□□ -1.45
TRIM39-203ENST00000396547 LYSTQ99698 3801 aa6.02□□□□□ -1.45
TRIM39-203ENST00000396547 SPINK7P58062 85 aa6.01□□□□□ -1.45
TRIM39-203ENST00000396547 ATP11AUNQ6ZP68 121 aa6.01□□□□□ -1.45
TRIM39-203ENST00000396547 Q75L30 129 aa6.01□□□□□ -1.45
TRIM39-203ENST00000396547 CDK2AP2O75956 126 aa6.01□□□□□ -1.45
TRIM39-203ENST00000396547 SPINK6Q6UWN8 80 aa6.01□□□□□ -1.45
TRIM39-203ENST00000396547 PANO1I0J062 215 aa5.99□□□□□ -1.45
TRIM39-203ENST00000396547 C8orf17Q9NRJ1 99 aa5.98□□□□□ -1.45
TRIM39-203ENST00000396547 A6NN06 94 aa5.98□□□□□ -1.45
TRIM39-203ENST00000396547 A0A087X002 238 aa5.97□□□□□ -1.45
TRIM39-203ENST00000396547 HRES1P13985 223 aa5.97□□□□□ -1.45
TRIM39-203ENST00000396547 MOBPQ13875 183 aa5.97□□□□□ -1.45
TRIM39-203ENST00000396547 NOTCH2NLQ7Z3S9 236 aa5.97□□□□□ -1.45
TRIM39-203ENST00000396547 CDC42SE1Q9NRR8 79 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms