RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
NDE1-201ENST00000396354 LINC01556Q5JQF7 62 aa5.97□□□□□ -1.45
NDE1-201ENST00000396354 VPS13DQ5THJ4 4388 aa5.97□□□□□ -1.45
NDE1-201ENST00000396354 A0A1W2PNM2 257 aa5.97□□□□□ -1.45
NDE1-201ENST00000396354 RPL37AP61513 92 aaKnown RBP5.97□□□□□ -1.45
NDE1-201ENST00000396354 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
NDE1-201ENST00000396354 Q6ZRX8 168 aa5.96□□□□□ -1.46
NDE1-201ENST00000396354 K7EQZ3 153 aa5.96□□□□□ -1.46
NDE1-201ENST00000396354 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
NDE1-201ENST00000396354 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
NDE1-201ENST00000396354 FAM229BQ4G0N7 80 aa5.95□□□□□ -1.46
NDE1-201ENST00000396354 UBE2DNLQ8IWF7 75 aa5.95□□□□□ -1.46
NDE1-201ENST00000396354 BRK1Q8WUW1 75 aa5.95□□□□□ -1.46
NDE1-201ENST00000396354 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
NDE1-201ENST00000396354 A0A087WSZ3 146 aa5.94□□□□□ -1.46
NDE1-201ENST00000396354 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
NDE1-201ENST00000396354 DNAH10OSP0CZ25 163 aa5.94□□□□□ -1.46
NDE1-201ENST00000396354 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
NDE1-201ENST00000396354 KCNQ1DNQ9H478 68 aa5.94□□□□□ -1.46
NDE1-201ENST00000396354 KRTAP1-5Q9BYS1 174 aa5.93□□□□□ -1.46
NDE1-201ENST00000396354 SERP1Q9Y6X1 66 aa5.93□□□□□ -1.46
NDE1-201ENST00000396354 KLKP1Q107X0 134 aa5.93□□□□□ -1.46
NDE1-201ENST00000396354 IGLV1-50A0A075B6I6 118 aa5.93□□□□□ -1.46
NDE1-201ENST00000396354 PRYO14603 147 aa5.93□□□□□ -1.46
NDE1-201ENST00000396354 EPM2AB3EWF7 344 aa5.91□□□□□ -1.46
NDE1-201ENST00000396354 LINC00476Q8WZB0 136 aa5.91□□□□□ -1.46
NDE1-201ENST00000396354 REG3GQ6UW15 175 aa5.91□□□□□ -1.46
NDE1-201ENST00000396354 PHF5AQ7RTV0 110 aaKnown RBP5.91□□□□□ -1.46
NDE1-201ENST00000396354 B9D2Q9BPU9 175 aa5.91□□□□□ -1.46
NDE1-201ENST00000396354 DHRS4-AS1Q9P1J3 65 aa5.9□□□□□ -1.46
NDE1-201ENST00000396354 FRAS1Q86XX4 4008 aa5.9□□□□□ -1.46
NDE1-201ENST00000396354 OCR1Q9BZK8 76 aa5.89□□□□□ -1.47
NDE1-201ENST00000396354 Q8NBF4 154 aa5.89□□□□□ -1.47
NDE1-201ENST00000396354 UBE2AP49459 152 aa5.88□□□□□ -1.47
NDE1-201ENST00000396354 H3BQ85 93 aa5.88□□□□□ -1.47
NDE1-201ENST00000396354 SMIM26A0A096LP01 95 aa5.87□□□□□ -1.47
NDE1-201ENST00000396354 PSPHP1O15172 72 aa5.87□□□□□ -1.47
NDE1-201ENST00000396354 DSCR10P59022 87 aa5.87□□□□□ -1.47
NDE1-201ENST00000396354 IGFL1Q6UW32 110 aa5.87□□□□□ -1.47
NDE1-201ENST00000396354 KRTAP11-1Q8IUC1 163 aa5.87□□□□□ -1.47
NDE1-201ENST00000396354 IGLV9-49A0A0B4J1Y8 123 aa5.86□□□□□ -1.47
NDE1-201ENST00000396354 H0Y9J4 135 aa5.86□□□□□ -1.47
NDE1-201ENST00000396354 IGLV5-48A0A075B6I7 105 aa5.86□□□□□ -1.47
NDE1-201ENST00000396354 DNAH8Q96JB1 4490 aa5.86□□□□□ -1.47
NDE1-201ENST00000396354 LINC00208Q96KT6 92 aa5.85□□□□□ -1.47
NDE1-201ENST00000396354 PLA2G1BP04054 148 aaKnown RBP5.85□□□□□ -1.47
NDE1-201ENST00000396354 DNAH17Q9UFH2 4485 aa5.84□□□□□ -1.47
NDE1-201ENST00000396354 DNAH6Q9C0G6 4158 aa5.84□□□□□ -1.47
NDE1-201ENST00000396354 KRTAP4-16G5E9R7 235 aaPredicted RBP5.84□□□□□ -1.47
NDE1-201ENST00000396354 ANAPC11Q9NYG5 84 aa5.84□□□□□ -1.47
NDE1-201ENST00000396354 HCG22E2RYF7 251 aa5.83□□□□□ -1.48
NDE1-201ENST00000396354 NDUFC1O43677 76 aa5.82□□□□□ -1.48
NDE1-201ENST00000396354 BCE1O60756 84 aa5.82□□□□□ -1.48
NDE1-201ENST00000396354 PANO1I0J062 215 aa5.82□□□□□ -1.48
NDE1-201ENST00000396354 APLNQ9ULZ1 77 aa5.81□□□□□ -1.48
NDE1-201ENST00000396354 TLX1NBP0CAT3 122 aa5.81□□□□□ -1.48
NDE1-201ENST00000396354 NDUFS5O43920 106 aa5.8□□□□□ -1.48
NDE1-201ENST00000396354 PMAIP1Q13794 54 aa5.8□□□□□ -1.48
NDE1-201ENST00000396354 C1orf64Q8NEQ6 169 aa5.8□□□□□ -1.48
NDE1-201ENST00000396354 HYDINQ4G0P3 5121 aa5.79□□□□□ -1.48
NDE1-201ENST00000396354 SPRR1AP35321 89 aa5.79□□□□□ -1.48
NDE1-201ENST00000396354 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
NDE1-201ENST00000396354 DNAH5Q8TE73 4624 aa5.79□□□□□ -1.48
NDE1-201ENST00000396354 DNAH11Q96DT5 4516 aa5.79□□□□□ -1.48
NDE1-201ENST00000396354 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
NDE1-201ENST00000396354 C16orf90A8MZG2 172 aa5.77□□□□□ -1.49
NDE1-201ENST00000396354 MP68P56378 58 aa5.77□□□□□ -1.49
NDE1-201ENST00000396354 CASC2Q6XLA1 102 aa5.77□□□□□ -1.49
NDE1-201ENST00000396354 IGLV5-37A0A075B6J1 123 aa5.76□□□□□ -1.49
NDE1-201ENST00000396354 SPRR4Q96PI1 79 aa5.76□□□□□ -1.49
NDE1-201ENST00000396354 H0Y9P7 68 aa5.75□□□□□ -1.49
NDE1-201ENST00000396354 ATP5EP56381 51 aaPredicted RBP5.74□□□□□ -1.49
NDE1-201ENST00000396354 ALMS1Q8TCU4 4167 aa5.74□□□□□ -1.49
NDE1-201ENST00000396354 A8MU10 97 aa5.74□□□□□ -1.49
NDE1-201ENST00000396354 IGHV6-1A0A0B4J1U7 121 aa5.73□□□□□ -1.49
NDE1-201ENST00000396354 A8MUN3 132 aa5.72□□□□□ -1.49
NDE1-201ENST00000396354 Q6ZRN7 208 aaPredicted RBP5.72□□□□□ -1.49
NDE1-201ENST00000396354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.72□□□□□ -1.49
NDE1-201ENST00000396354 FAT2Q9NYQ8 4349 aa5.72□□□□□ -1.49
NDE1-201ENST00000396354 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
NDE1-201ENST00000396354 PKD1P98161 4303 aa5.72□□□□□ -1.49
NDE1-201ENST00000396354 hDV103S1A0JD37 113 aa5.71□□□□□ -1.49
NDE1-201ENST00000396354 CD164Q04900 197 aa5.71□□□□□ -1.5
NDE1-201ENST00000396354 RETNLBQ9BQ08 111 aa5.71□□□□□ -1.5
NDE1-201ENST00000396354 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
NDE1-201ENST00000396354 NUPR2A6NF83 97 aa5.7□□□□□ -1.5
NDE1-201ENST00000396354 MOBPQ13875 183 aa5.7□□□□□ -1.5
NDE1-201ENST00000396354 NBDYA0A0U1RRE5 68 aa5.69□□□□□ -1.5
NDE1-201ENST00000396354 TRAV22A0A0B4J277 110 aa5.68□□□□□ -1.5
NDE1-201ENST00000396354 SPTSSBQ8NFR3 76 aa5.68□□□□□ -1.5
NDE1-201ENST00000396354 WWC2-AS2Q96NR7 200 aa5.68□□□□□ -1.5
NDE1-201ENST00000396354 NDUFB1O75438 58 aa5.67□□□□□ -1.5
NDE1-201ENST00000396354 C9orf163Q8N9P6 203 aa5.66□□□□□ -1.5
NDE1-201ENST00000396354 PRR15LQ9BU68 103 aa5.66□□□□□ -1.5
NDE1-201ENST00000396354 LRP1BQ9NZR2 4599 aa5.66□□□□□ -1.5
NDE1-201ENST00000396354 CDK2AP2O75956 126 aa5.66□□□□□ -1.5
NDE1-201ENST00000396354 A8MWP4 228 aa5.65□□□□□ -1.5
NDE1-201ENST00000396354 CHKB-CPT1BH3BT56 60 aa5.65□□□□□ -1.5
NDE1-201ENST00000396354 CIRBP-AS1Q8TBR5 109 aa5.65□□□□□ -1.51
NDE1-201ENST00000396354 A0A087X002 238 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms