RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
CXCL12-205ENST00000395794 VAMP3Q15836 100 aa7.68□□□□□ -1.18
CXCL12-205ENST00000395794 ASB16-AS1Q495Z4 193 aa7.66□□□□□ -1.18
CXCL12-205ENST00000395794 SMIM11BQ8TCY0 68 aa7.66□□□□□ -1.18
CXCL12-205ENST00000395794 H7C2G1 150 aa7.65□□□□□ -1.18
CXCL12-205ENST00000395794 CD164Q04900 197 aa7.65□□□□□ -1.18
CXCL12-205ENST00000395794 IGLV5-48A0A075B6I7 105 aa7.64□□□□□ -1.19
CXCL12-205ENST00000395794 SCGB1D1O95968 90 aa7.64□□□□□ -1.19
CXCL12-205ENST00000395794 KRTAP4-11Q9BYQ6 195 aa7.63□□□□□ -1.19
CXCL12-205ENST00000395794 FAT4Q6V0I7 4981 aa7.62□□□□□ -1.19
CXCL12-205ENST00000395794 SMIM29Q86T20 159 aa7.62□□□□□ -1.19
CXCL12-205ENST00000395794 F8WEM9 126 aa7.61□□□□□ -1.19
CXCL12-205ENST00000395794 LCE4AQ5TA78 99 aa7.61□□□□□ -1.19
CXCL12-205ENST00000395794 HIST1H4GQ99525 98 aa7.61□□□□□ -1.19
CXCL12-205ENST00000395794 LINC01547P58512 204 aaPredicted RBP7.6□□□□□ -1.19
CXCL12-205ENST00000395794 LINC00575Q6W349 94 aa7.58□□□□□ -1.2
CXCL12-205ENST00000395794 hADV29S1A0JD25 119 aa7.57□□□□□ -1.2
CXCL12-205ENST00000395794 COX8AP10176 69 aa7.56□□□□□ -1.2
CXCL12-205ENST00000395794 Q5XG85 94 aa7.56□□□□□ -1.2
CXCL12-205ENST00000395794 C12orf57Q99622 126 aa7.56□□□□□ -1.2
CXCL12-205ENST00000395794 C9orf92A6NGG3 77 aa7.55□□□□□ -1.2
CXCL12-205ENST00000395794 TCL1BO95988 128 aa7.55□□□□□ -1.2
CXCL12-205ENST00000395794 C21orf62-AS1Q17RA5 79 aa7.55□□□□□ -1.2
CXCL12-205ENST00000395794 BVES-AS1Q5T3Y7 98 aa7.55□□□□□ -1.2
CXCL12-205ENST00000395794 Q6ZQY7 126 aa7.55□□□□□ -1.2
CXCL12-205ENST00000395794 A0A0G2JQZ4 141 aa7.54□□□□□ -1.2
CXCL12-205ENST00000395794 DLEU1O43261 78 aa7.53□□□□□ -1.2
CXCL12-205ENST00000395794 SNCGO76070 127 aa7.52□□□□□ -1.21
CXCL12-205ENST00000395794 C1orf195Q5TG92 126 aa7.52□□□□□ -1.21
CXCL12-205ENST00000395794 Q6JHZ5 121 aa7.52□□□□□ -1.21
CXCL12-205ENST00000395794 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.52□□□□□ -1.21
CXCL12-205ENST00000395794 KRTAP19-4Q3LI73 84 aa7.51□□□□□ -1.21
CXCL12-205ENST00000395794 RAB37Q96AX2 223 aa7.51□□□□□ -1.21
CXCL12-205ENST00000395794 PPDPFLQ8WWR9 84 aa7.5□□□□□ -1.21
CXCL12-205ENST00000395794 C14orf144Q96I85 54 aa7.5□□□□□ -1.21
CXCL12-205ENST00000395794 SNHG12Q9BXW3 62 aa7.5□□□□□ -1.21
CXCL12-205ENST00000395794 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
CXCL12-205ENST00000395794 PAM16Q9Y3D7 125 aa7.5□□□□□ -1.21
CXCL12-205ENST00000395794 SPATA45Q537H7 98 aa7.49□□□□□ -1.21
CXCL12-205ENST00000395794 OCIAD2Q56VL3 154 aa7.49□□□□□ -1.21
CXCL12-205ENST00000395794 CLEC2BQ92478 149 aa7.49□□□□□ -1.21
CXCL12-205ENST00000395794 VAMP8Q9BV40 100 aa7.49□□□□□ -1.21
CXCL12-205ENST00000395794 TMEM238LA0A1B0GVL6 79 aa7.48□□□□□ -1.21
CXCL12-205ENST00000395794 PCOTHQ58A44 107 aa7.48□□□□□ -1.21
CXCL12-205ENST00000395794 HIGD1BQ9P298 99 aa7.48□□□□□ -1.21
CXCL12-205ENST00000395794 IGLV8-61A0A075B6I0 122 aa7.47□□□□□ -1.21
CXCL12-205ENST00000395794 CFC1BP0CG36 223 aa7.47□□□□□ -1.21
CXCL12-205ENST00000395794 CFC1P0CG37 223 aa7.47□□□□□ -1.21
CXCL12-205ENST00000395794 TRBV7-7A0A0K0K1E9 115 aa7.45□□□□□ -1.22
CXCL12-205ENST00000395794 H0YGX0 51 aa7.45□□□□□ -1.22
CXCL12-205ENST00000395794 IGFL1Q6UW32 110 aa7.45□□□□□ -1.22
CXCL12-205ENST00000395794 SVIPQ8NHG7 77 aa7.45□□□□□ -1.22
CXCL12-205ENST00000395794 A0A0B4J2C4 111 aa7.44□□□□□ -1.22
CXCL12-205ENST00000395794 C2orf91Q6ZV80 131 aa7.41□□□□□ -1.22
CXCL12-205ENST00000395794 CEND1Q8N111 149 aa7.41□□□□□ -1.22
CXCL12-205ENST00000395794 H3BUT2 72 aa7.4□□□□□ -1.22
CXCL12-205ENST00000395794 RPL37P61927 97 aaKnown RBP7.4□□□□□ -1.22
CXCL12-205ENST00000395794 PRO1854Q9UHT4 67 aa7.4□□□□□ -1.22
CXCL12-205ENST00000395794 LCE5AQ5TCM9 118 aa7.39□□□□□ -1.23
CXCL12-205ENST00000395794 LST1O00453 97 aa7.38□□□□□ -1.23
CXCL12-205ENST00000395794 SS18L2Q9UHA2 77 aa7.38□□□□□ -1.23
CXCL12-205ENST00000395794 A0A1B0GX51 115 aa7.37□□□□□ -1.23
CXCL12-205ENST00000395794 KRTAP9-7A8MTY7 169 aa7.37□□□□□ -1.23
CXCL12-205ENST00000395794 NDUFV3P56181 108 aaKnown RBP7.37□□□□□ -1.23
CXCL12-205ENST00000395794 FABP2P12104 132 aa7.36□□□□□ -1.23
CXCL12-205ENST00000395794 FAM218AQ96MZ4 157 aa7.36□□□□□ -1.23
CXCL12-205ENST00000395794 TEN1Q86WV5 123 aa7.35□□□□□ -1.23
CXCL12-205ENST00000395794 H3BMG7 143 aa7.34□□□□□ -1.23
CXCL12-205ENST00000395794 FXYD2P54710 66 aa7.34□□□□□ -1.23
CXCL12-205ENST00000395794 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
CXCL12-205ENST00000395794 PSMB2P49721 201 aa7.33□□□□□ -1.24
CXCL12-205ENST00000395794 Q6Q795 121 aa7.33□□□□□ -1.24
CXCL12-205ENST00000395794 DNAL4O96015 105 aa7.32□□□□□ -1.24
CXCL12-205ENST00000395794 HSD52Q0P140 79 aa7.32□□□□□ -1.24
CXCL12-205ENST00000395794 TRIAP1O43715 76 aa7.31□□□□□ -1.24
CXCL12-205ENST00000395794 ATP11AUNQ6ZP68 121 aa7.31□□□□□ -1.24
CXCL12-205ENST00000395794 H3BQ85 93 aa7.3□□□□□ -1.24
CXCL12-205ENST00000395794 COX6CP09669 75 aa7.3□□□□□ -1.24
CXCL12-205ENST00000395794 PYY3Q5JQD4 70 aa7.3□□□□□ -1.24
CXCL12-205ENST00000395794 A0A087WSZ3 146 aa7.29□□□□□ -1.24
CXCL12-205ENST00000395794 COX6B2Q6YFQ2 88 aa7.29□□□□□ -1.24
CXCL12-205ENST00000395794 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
CXCL12-205ENST00000395794 Q75L30 129 aa7.28□□□□□ -1.24
CXCL12-205ENST00000395794 Q96NJ1 140 aa7.28□□□□□ -1.24
CXCL12-205ENST00000395794 ORMDL1Q9P0S3 153 aa7.28□□□□□ -1.24
CXCL12-205ENST00000395794 K7ERJ3 54 aa7.26□□□□□ -1.25
CXCL12-205ENST00000395794 MT1HP80294 61 aa7.26□□□□□ -1.25
CXCL12-205ENST00000395794 ANKRD29Q8N6D5 301 aa7.26□□□□□ -1.25
CXCL12-205ENST00000395794 UQCR10Q9UDW1 63 aa7.26□□□□□ -1.25
CXCL12-205ENST00000395794 TMEM256-PLSCR3K7ERE1 68 aa7.25□□□□□ -1.25
CXCL12-205ENST00000395794 M0R2T5 61 aa7.24□□□□□ -1.25
CXCL12-205ENST00000395794 A0A1B0GV72 72 aa7.22□□□□□ -1.25
CXCL12-205ENST00000395794 A0A1W2PNM2 257 aa7.22□□□□□ -1.25
CXCL12-205ENST00000395794 SIGMAR1Q99720 223 aa7.22□□□□□ -1.25
CXCL12-205ENST00000395794 TRBV7-4A0A0J9YYF1 115 aa7.21□□□□□ -1.26
CXCL12-205ENST00000395794 SCGB1C2P0DMR2 95 aa7.21□□□□□ -1.26
CXCL12-205ENST00000395794 C20orf166-AS1Q96NR2 134 aa7.19□□□□□ -1.26
CXCL12-205ENST00000395794 TRACP01848 142 aa7.18□□□□□ -1.26
CXCL12-205ENST00000395794 CCKP06307 115 aa7.18□□□□□ -1.26
CXCL12-205ENST00000395794 IGKV4-1P06312 121 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms