RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 LAMTOR3Q9UHA4 124 aa4.82□□□□□ -1.64
ATG4A-205ENST00000394892 TEX49A0A1B0GTD5 131 aa4.81□□□□□ -1.64
ATG4A-205ENST00000394892 A0A1B0GWB2 263 aa4.81□□□□□ -1.64
ATG4A-205ENST00000394892 A6NDN8 102 aa4.81□□□□□ -1.64
ATG4A-205ENST00000394892 H3BS24 57 aa4.81□□□□□ -1.64
ATG4A-205ENST00000394892 TAL2Q16559 108 aa4.81□□□□□ -1.64
ATG4A-205ENST00000394892 Q6ZVH6 145 aa4.81□□□□□ -1.64
ATG4A-205ENST00000394892 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
ATG4A-205ENST00000394892 C9orf92A6NGG3 77 aa4.8□□□□□ -1.64
ATG4A-205ENST00000394892 H7C2G1 150 aa4.8□□□□□ -1.64
ATG4A-205ENST00000394892 CFC1BP0CG36 223 aa4.8□□□□□ -1.64
ATG4A-205ENST00000394892 C1orf195Q5TG92 126 aa4.8□□□□□ -1.64
ATG4A-205ENST00000394892 CD164Q04900 197 aa4.79□□□□□ -1.64
ATG4A-205ENST00000394892 Q5XG85 94 aa4.79□□□□□ -1.64
ATG4A-205ENST00000394892 SLC25A34Q6PIV7 304 aa4.79□□□□□ -1.64
ATG4A-205ENST00000394892 PCOTHQ58A44 107 aa4.78□□□□□ -1.64
ATG4A-205ENST00000394892 PRO1933Q9H354 126 aa4.78□□□□□ -1.64
ATG4A-205ENST00000394892 TRAV13-2A0A0B4J235 113 aa4.77□□□□□ -1.65
ATG4A-205ENST00000394892 SNRPEP62304 92 aaKnown RBP4.77□□□□□ -1.65
ATG4A-205ENST00000394892 LINC00575Q6W349 94 aa4.77□□□□□ -1.65
ATG4A-205ENST00000394892 LIMD2Q9BT23 127 aa4.77□□□□□ -1.65
ATG4A-205ENST00000394892 AKR1D1P51857 326 aa4.76□□□□□ -1.65
ATG4A-205ENST00000394892 COPS9Q8WXC6 57 aa4.76□□□□□ -1.65
ATG4A-205ENST00000394892 MT1HP80294 61 aa4.74□□□□□ -1.65
ATG4A-205ENST00000394892 C12orf57Q99622 126 aa4.74□□□□□ -1.65
ATG4A-205ENST00000394892 IGLV8-61A0A075B6I0 122 aa4.73□□□□□ -1.65
ATG4A-205ENST00000394892 S100A2P29034 98 aa4.73□□□□□ -1.65
ATG4A-205ENST00000394892 Q6ZQY7 126 aa4.73□□□□□ -1.65
ATG4A-205ENST00000394892 COX8AP10176 69 aa4.72□□□□□ -1.65
ATG4A-205ENST00000394892 VAMP3Q15836 100 aa4.72□□□□□ -1.65
ATG4A-205ENST00000394892 hADV29S1A0JD25 119 aa4.71□□□□□ -1.66
ATG4A-205ENST00000394892 M0R2T5 61 aa4.71□□□□□ -1.66
ATG4A-205ENST00000394892 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
ATG4A-205ENST00000394892 IGFL1Q6UW32 110 aa4.71□□□□□ -1.66
ATG4A-205ENST00000394892 NHP2Q9NX24 153 aaKnown RBP4.71□□□□□ -1.66
ATG4A-205ENST00000394892 FLGP20930 4061 aaPredicted RBP4.7□□□□□ -1.66
ATG4A-205ENST00000394892 CFC1P0CG37 223 aa4.7□□□□□ -1.66
ATG4A-205ENST00000394892 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
ATG4A-205ENST00000394892 C5orf47Q569G3 176 aa4.7□□□□□ -1.66
ATG4A-205ENST00000394892 C2orf91Q6ZV80 131 aa4.7□□□□□ -1.66
ATG4A-205ENST00000394892 TRBV7-7A0A0K0K1E9 115 aa4.69□□□□□ -1.66
ATG4A-205ENST00000394892 DLEU1O43261 78 aa4.69□□□□□ -1.66
ATG4A-205ENST00000394892 SEC61GP60059 68 aa4.69□□□□□ -1.66
ATG4A-205ENST00000394892 OCIAD2Q56VL3 154 aa4.69□□□□□ -1.66
ATG4A-205ENST00000394892 C14orf144Q96I85 54 aa4.69□□□□□ -1.66
ATG4A-205ENST00000394892 FAM218AQ96MZ4 157 aa4.69□□□□□ -1.66
ATG4A-205ENST00000394892 HIST1H4GQ99525 98 aa4.69□□□□□ -1.66
ATG4A-205ENST00000394892 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
ATG4A-205ENST00000394892 H3BUT2 72 aa4.68□□□□□ -1.66
ATG4A-205ENST00000394892 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.68□□□□□ -1.66
ATG4A-205ENST00000394892 COX6B2Q6YFQ2 88 aa4.67□□□□□ -1.66
ATG4A-205ENST00000394892 CLEC2BQ92478 149 aa4.67□□□□□ -1.66
ATG4A-205ENST00000394892 TCL1BO95988 128 aa4.66□□□□□ -1.66
ATG4A-205ENST00000394892 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
ATG4A-205ENST00000394892 Q6JHZ5 121 aa4.66□□□□□ -1.66
ATG4A-205ENST00000394892 F8WEM9 126 aa4.65□□□□□ -1.67
ATG4A-205ENST00000394892 SMIM6P0DI80 62 aa4.65□□□□□ -1.67
ATG4A-205ENST00000394892 SPATA45Q537H7 98 aa4.65□□□□□ -1.67
ATG4A-205ENST00000394892 HIGD1BQ9P298 99 aa4.65□□□□□ -1.67
ATG4A-205ENST00000394892 PAM16Q9Y3D7 125 aa4.65□□□□□ -1.67
ATG4A-205ENST00000394892 A0A1B0GV72 72 aa4.64□□□□□ -1.67
ATG4A-205ENST00000394892 A0A1B0GV90 55 aa4.64□□□□□ -1.67
ATG4A-205ENST00000394892 BVES-AS1Q5T3Y7 98 aa4.64□□□□□ -1.67
ATG4A-205ENST00000394892 A0A0B4J2C4 111 aa4.63□□□□□ -1.67
ATG4A-205ENST00000394892 FXYD2P54710 66 aa4.63□□□□□ -1.67
ATG4A-205ENST00000394892 PPDPFLQ8WWR9 84 aa4.63□□□□□ -1.67
ATG4A-205ENST00000394892 OBSCN-AS1Q96MR7 158 aa4.63□□□□□ -1.67
ATG4A-205ENST00000394892 Q96NJ1 140 aa4.62□□□□□ -1.67
ATG4A-205ENST00000394892 SNHG12Q9BXW3 62 aa4.62□□□□□ -1.67
ATG4A-205ENST00000394892 Q6Q795 121 aa4.61□□□□□ -1.67
ATG4A-205ENST00000394892 CEND1Q8N111 149 aa4.61□□□□□ -1.67
ATG4A-205ENST00000394892 SCGB1A1P11684 91 aa4.6□□□□□ -1.67
ATG4A-205ENST00000394892 NDUFV3P56181 108 aaKnown RBP4.6□□□□□ -1.67
ATG4A-205ENST00000394892 PYY3Q5JQD4 70 aa4.6□□□□□ -1.67
ATG4A-205ENST00000394892 Q75L30 129 aa4.6□□□□□ -1.67
ATG4A-205ENST00000394892 RAB37Q96AX2 223 aa4.6□□□□□ -1.67
ATG4A-205ENST00000394892 VAMP8Q9BV40 100 aa4.6□□□□□ -1.67
ATG4A-205ENST00000394892 A0A1W2PNM2 257 aa4.59□□□□□ -1.67
ATG4A-205ENST00000394892 H0YGX0 51 aa4.59□□□□□ -1.67
ATG4A-205ENST00000394892 TRIAP1O43715 76 aa4.59□□□□□ -1.67
ATG4A-205ENST00000394892 LST1O00453 97 aa4.58□□□□□ -1.68
ATG4A-205ENST00000394892 PRO1854Q9UHT4 67 aa4.58□□□□□ -1.68
ATG4A-205ENST00000394892 A0A087WSZ3 146 aa4.57□□□□□ -1.68
ATG4A-205ENST00000394892 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
ATG4A-205ENST00000394892 KRTAP16-1A8MUX0 517 aa4.57□□□□□ -1.68
ATG4A-205ENST00000394892 K7ERJ3 54 aa4.57□□□□□ -1.68
ATG4A-205ENST00000394892 TEN1Q86WV5 123 aa4.57□□□□□ -1.68
ATG4A-205ENST00000394892 MTURNQ8N3F0 131 aa4.57□□□□□ -1.68
ATG4A-205ENST00000394892 C20orf166-AS1Q96NR2 134 aa4.57□□□□□ -1.68
ATG4A-205ENST00000394892 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
ATG4A-205ENST00000394892 A8MUU9 505 aa4.56□□□□□ -1.68
ATG4A-205ENST00000394892 H3BMG7 143 aa4.56□□□□□ -1.68
ATG4A-205ENST00000394892 A0A1B0GX51 115 aa4.55□□□□□ -1.68
ATG4A-205ENST00000394892 FABP2P12104 132 aa4.55□□□□□ -1.68
ATG4A-205ENST00000394892 TSTD3H0UI37 97 aa4.54□□□□□ -1.68
ATG4A-205ENST00000394892 DSCR10P59022 87 aa4.54□□□□□ -1.68
ATG4A-205ENST00000394892 NOTCH2NLQ7Z3S9 236 aa4.54□□□□□ -1.68
ATG4A-205ENST00000394892 ATP11AUNQ6ZP68 121 aa4.53□□□□□ -1.68
ATG4A-205ENST00000394892 HSD52Q0P140 79 aa4.52□□□□□ -1.69
ATG4A-205ENST00000394892 SS18L2Q9UHA2 77 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 240.8 ms