RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 SMIM20Q8N5G0 67 aa12.55□□□□□ -0.4
PRKCD-202ENST00000394729 Q6ZVQ6 151 aa12.53□□□□□ -0.4
PRKCD-202ENST00000394729 SMIM29Q86T20 159 aa12.53□□□□□ -0.4
PRKCD-202ENST00000394729 Q8N9L7 120 aa12.52□□□□□ -0.41
PRKCD-202ENST00000394729 IGLV5-48A0A075B6I7 105 aa12.52□□□□□ -0.41
PRKCD-202ENST00000394729 BCE1O60756 84 aa12.52□□□□□ -0.41
PRKCD-202ENST00000394729 F8WEM9 126 aa12.51□□□□□ -0.41
PRKCD-202ENST00000394729 CIRBP-AS1Q8TBR5 109 aa12.51□□□□□ -0.41
PRKCD-202ENST00000394729 IGLV9-49A0A0B4J1Y8 123 aa12.5□□□□□ -0.41
PRKCD-202ENST00000394729 KRTAP10-1P60331 282 aa12.5□□□□□ -0.41
PRKCD-202ENST00000394729 PKD1P98161 4303 aa12.49□□□□□ -0.41
PRKCD-202ENST00000394729 A0A1W2PNM2 257 aa12.49□□□□□ -0.41
PRKCD-202ENST00000394729 H3BQ85 93 aa12.49□□□□□ -0.41
PRKCD-202ENST00000394729 PKIGQ9Y2B9 76 aa12.49□□□□□ -0.41
PRKCD-202ENST00000394729 DEFB116Q30KQ4 102 aa12.48□□□□□ -0.41
PRKCD-202ENST00000394729 ALMS1Q8TCU4 4167 aa12.48□□□□□ -0.41
PRKCD-202ENST00000394729 TRBV7-7A0A0K0K1E9 115 aa12.47□□□□□ -0.41
PRKCD-202ENST00000394729 LRP1BQ9NZR2 4599 aa12.47□□□□□ -0.41
PRKCD-202ENST00000394729 PDE6GP18545 87 aa12.45□□□□□ -0.42
PRKCD-202ENST00000394729 Q6JHZ5 121 aa12.45□□□□□ -0.42
PRKCD-202ENST00000394729 HRCT1Q6UXD1 115 aa12.44□□□□□ -0.42
PRKCD-202ENST00000394729 PLAC8Q9NZF1 115 aa12.44□□□□□ -0.42
PRKCD-202ENST00000394729 IGFL1Q6UW32 110 aa12.44□□□□□ -0.42
PRKCD-202ENST00000394729 NREPQ16612 68 aa12.43□□□□□ -0.42
PRKCD-202ENST00000394729 C9orf153Q5TBE3 101 aa12.41□□□□□ -0.42
PRKCD-202ENST00000394729 KRTAP13-1Q8IUC0 172 aa12.39□□□□□ -0.43
PRKCD-202ENST00000394729 Q6Q795 121 aa12.38□□□□□ -0.43
PRKCD-202ENST00000394729 A0A087WSZ3 146 aa12.38□□□□□ -0.43
PRKCD-202ENST00000394729 Q8NBF4 154 aa12.37□□□□□ -0.43
PRKCD-202ENST00000394729 BPY2O14599 106 aa12.36□□□□□ -0.43
PRKCD-202ENST00000394729 H0Y9J4 135 aa12.34□□□□□ -0.43
PRKCD-202ENST00000394729 IMUPQ9GZP8 106 aa12.33□□□□□ -0.44
PRKCD-202ENST00000394729 VPS13BQ7Z7G8 4022 aa12.33□□□□□ -0.44
PRKCD-202ENST00000394729 ZNF861PO60384 105 aa12.32□□□□□ -0.44
PRKCD-202ENST00000394729 SPRR4Q96PI1 79 aa12.31□□□□□ -0.44
PRKCD-202ENST00000394729 SMR3BP02814 79 aaPredicted RBP12.31□□□□□ -0.44
PRKCD-202ENST00000394729 MOBPQ13875 183 aa12.3□□□□□ -0.44
PRKCD-202ENST00000394729 LCE6AA0A183 80 aa12.3□□□□□ -0.44
PRKCD-202ENST00000394729 IGLV7-43P04211 117 aa12.29□□□□□ -0.44
PRKCD-202ENST00000394729 RYR2Q92736 4967 aa12.28□□□□□ -0.44
PRKCD-202ENST00000394729 RPL37AP61513 92 aaKnown RBP12.26□□□□□ -0.45
PRKCD-202ENST00000394729 ATP5EP2Q5VTU8 51 aa12.25□□□□□ -0.45
PRKCD-202ENST00000394729 CRYGAP11844 174 aa12.24□□□□□ -0.45
PRKCD-202ENST00000394729 FAT1Q14517 4588 aa12.23□□□□□ -0.45
PRKCD-202ENST00000394729 DYNC1H1Q14204 4646 aaKnown RBP12.22□□□□□ -0.45
PRKCD-202ENST00000394729 SPRR1BP22528 89 aa12.21□□□□□ -0.46
PRKCD-202ENST00000394729 CXCL6P80162 114 aa12.2□□□□□ -0.46
PRKCD-202ENST00000394729 RYR3Q15413 4870 aa12.2□□□□□ -0.46
PRKCD-202ENST00000394729 Q6ZSA8 131 aa12.2□□□□□ -0.46
PRKCD-202ENST00000394729 K7EQZ3 153 aa12.19□□□□□ -0.46
PRKCD-202ENST00000394729 IGKV4-1P06312 121 aa12.17□□□□□ -0.46
PRKCD-202ENST00000394729 IGLV8-61A0A075B6I0 122 aa12.15□□□□□ -0.46
PRKCD-202ENST00000394729 ATOX1O00244 68 aa12.15□□□□□ -0.47
PRKCD-202ENST00000394729 DSCR10P59022 87 aa12.14□□□□□ -0.47
PRKCD-202ENST00000394729 ZNF706Q9Y5V0 76 aaPredicted RBP12.14□□□□□ -0.47
PRKCD-202ENST00000394729 A0A087X002 238 aa12.12□□□□□ -0.47
PRKCD-202ENST00000394729 WFDC13Q8IUB5 93 aa12.1□□□□□ -0.47
PRKCD-202ENST00000394729 LINC00483Q53H64 154 aa12.1□□□□□ -0.47
PRKCD-202ENST00000394729 SPINK6Q6UWN8 80 aa12.09□□□□□ -0.47
PRKCD-202ENST00000394729 CYSTM1Q9H1C7 97 aa12.09□□□□□ -0.47
PRKCD-202ENST00000394729 COX7CP15954 63 aa12.04□□□□□ -0.48
PRKCD-202ENST00000394729 LINC00336Q6ZUF6 198 aa12.04□□□□□ -0.48
PRKCD-202ENST00000394729 SERP2Q8N6R1 65 aa12.04□□□□□ -0.48
PRKCD-202ENST00000394729 C20orf197Q8N268 126 aa12.02□□□□□ -0.48
PRKCD-202ENST00000394729 A0A1B0GVY2 172 aa12.01□□□□□ -0.49
PRKCD-202ENST00000394729 SNURFQ9Y675 71 aa12.01□□□□□ -0.49
PRKCD-202ENST00000394729 UQCRQO14949 82 aa12□□□□□ -0.49
PRKCD-202ENST00000394729 APOBP04114 4563 aaKnown RBP11.99□□□□□ -0.49
PRKCD-202ENST00000394729 A0A1B0GW54 56 aa11.99□□□□□ -0.49
PRKCD-202ENST00000394729 PLA2G1BP04054 148 aaKnown RBP11.98□□□□□ -0.49
PRKCD-202ENST00000394729 KRTAP13-2Q52LG2 175 aa11.98□□□□□ -0.49
PRKCD-202ENST00000394729 LINC00472Q9H8W2 130 aa11.98□□□□□ -0.49
PRKCD-202ENST00000394729 FLG2Q5D862 2391 aaPredicted RBP11.95□□□□□ -0.5
PRKCD-202ENST00000394729 IGHV6-1A0A0B4J1U7 121 aa11.92□□□□□ -0.5
PRKCD-202ENST00000394729 HCG22E2RYF7 251 aa11.92□□□□□ -0.5
PRKCD-202ENST00000394729 KRTAP1-4P0C5Y4 121 aa11.92□□□□□ -0.5
PRKCD-202ENST00000394729 Q96NJ1 140 aa11.91□□□□□ -0.5
PRKCD-202ENST00000394729 PRR26Q8N8Z3 221 aa11.9□□□□□ -0.5
PRKCD-202ENST00000394729 TRAV7A0A075B6U4 112 aa11.88□□□□□ -0.51
PRKCD-202ENST00000394729 A8MWP4 228 aa11.87□□□□□ -0.51
PRKCD-202ENST00000394729 PRR15Q8IV56 129 aa11.87□□□□□ -0.51
PRKCD-202ENST00000394729 J3KT08 172 aa11.86□□□□□ -0.51
PRKCD-202ENST00000394729 NOTCH2NLQ7Z3S9 236 aa11.86□□□□□ -0.51
PRKCD-202ENST00000394729 C5orf47Q569G3 176 aa11.85□□□□□ -0.51
PRKCD-202ENST00000394729 KIAA1109Q2LD37 5005 aa11.85□□□□□ -0.51
PRKCD-202ENST00000394729 CASC2Q6XLA1 102 aa11.84□□□□□ -0.51
PRKCD-202ENST00000394729 TYMSOSQ8TAI1 123 aa11.83□□□□□ -0.52
PRKCD-202ENST00000394729 OCR1Q9BZK8 76 aa11.83□□□□□ -0.52
PRKCD-202ENST00000394729 NDUFB1O75438 58 aa11.83□□□□□ -0.52
PRKCD-202ENST00000394729 CDK2AP2O75956 126 aa11.83□□□□□ -0.52
PRKCD-202ENST00000394729 OXTP01178 125 aa11.82□□□□□ -0.52
PRKCD-202ENST00000394729 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
PRKCD-202ENST00000394729 SSBP3-AS1Q7Z2R9 100 aa11.8□□□□□ -0.52
PRKCD-202ENST00000394729 LRP1Q07954 4544 aaKnown RBP11.8□□□□□ -0.52
PRKCD-202ENST00000394729 C4orf26Q17RF5 130 aa11.79□□□□□ -0.52
PRKCD-202ENST00000394729 NDUFS5O43920 106 aa11.79□□□□□ -0.52
PRKCD-202ENST00000394729 TMEM254Q8TBM7 123 aa11.77□□□□□ -0.53
PRKCD-202ENST00000394729 MMP24-AS1A0A0U1RRL7 71 aa11.75□□□□□ -0.53
PRKCD-202ENST00000394729 C4orf48Q5BLP8 95 aa11.75□□□□□ -0.53
PRKCD-202ENST00000394729 DMBT1Q9UGM3 2413 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms