RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
HOXC6-202ENST00000394331 NKAPP1Q8N9T2 125 aa12.06□□□□□ -0.48
HOXC6-202ENST00000394331 TRRAPQ9Y4A5 3859 aa12.05□□□□□ -0.48
HOXC6-202ENST00000394331 A6NED7 52 aa12.05□□□□□ -0.48
HOXC6-202ENST00000394331 C9orf163Q8N9P6 203 aa12.05□□□□□ -0.48
HOXC6-202ENST00000394331 C7orf33Q8WU49 177 aa12.05□□□□□ -0.48
HOXC6-202ENST00000394331 KRTAP29-1A8MX34 341 aaPredicted RBP12.04□□□□□ -0.48
HOXC6-202ENST00000394331 PRB2P02812 416 aaPredicted RBP12.04□□□□□ -0.48
HOXC6-202ENST00000394331 SPRR1AP35321 89 aa12.04□□□□□ -0.48
HOXC6-202ENST00000394331 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
HOXC6-202ENST00000394331 KRTAP24-1Q3LI83 254 aa12.03□□□□□ -0.48
HOXC6-202ENST00000394331 H0Y9P7 68 aa12.02□□□□□ -0.49
HOXC6-202ENST00000394331 DNAH10OSP0CZ25 163 aa12□□□□□ -0.49
HOXC6-202ENST00000394331 WFDC13Q8IUB5 93 aa11.99□□□□□ -0.49
HOXC6-202ENST00000394331 IGLV5-37A0A075B6J1 123 aa11.97□□□□□ -0.49
HOXC6-202ENST00000394331 PLAC8Q9NZF1 115 aa11.97□□□□□ -0.49
HOXC6-202ENST00000394331 SERTAD4-AS1Q5TG53 156 aa11.97□□□□□ -0.49
HOXC6-202ENST00000394331 COA5Q86WW8 74 aa11.97□□□□□ -0.49
HOXC6-202ENST00000394331 LINC01558Q9Y6Z2 57 aa11.96□□□□□ -0.5
HOXC6-202ENST00000394331 IGLV7-46A0A075B6I9 117 aa11.95□□□□□ -0.5
HOXC6-202ENST00000394331 IGLV1-50A0A075B6I6 118 aa11.94□□□□□ -0.5
HOXC6-202ENST00000394331 LINC00476Q8WZB0 136 aa11.94□□□□□ -0.5
HOXC6-202ENST00000394331 TLX1NBP0CAT3 122 aa11.93□□□□□ -0.5
HOXC6-202ENST00000394331 MOBPQ13875 183 aa11.93□□□□□ -0.5
HOXC6-202ENST00000394331 F8P00451 2351 aa11.91□□□□□ -0.5
HOXC6-202ENST00000394331 CASC2Q6XLA1 102 aa11.9□□□□□ -0.5
HOXC6-202ENST00000394331 IGLV8-61A0A075B6I0 122 aa11.9□□□□□ -0.5
HOXC6-202ENST00000394331 DEFB116Q30KQ4 102 aa11.9□□□□□ -0.51
HOXC6-202ENST00000394331 IGFL1Q6UW32 110 aa11.88□□□□□ -0.51
HOXC6-202ENST00000394331 CNBPP62633 177 aaKnown RBP11.85□□□□□ -0.51
HOXC6-202ENST00000394331 RPL37AP8A6NKH3 93 aa11.84□□□□□ -0.51
HOXC6-202ENST00000394331 C8orf87E5RJ46 101 aa11.83□□□□□ -0.51
HOXC6-202ENST00000394331 TENM3Q9P273 2699 aa11.82□□□□□ -0.52
HOXC6-202ENST00000394331 A0A087WSZ3 146 aa11.82□□□□□ -0.52
HOXC6-202ENST00000394331 A8MWP4 228 aa11.81□□□□□ -0.52
HOXC6-202ENST00000394331 CASC10Q5T4H9 136 aa11.8□□□□□ -0.52
HOXC6-202ENST00000394331 PKD1L1Q8TDX9 2849 aa11.79□□□□□ -0.52
HOXC6-202ENST00000394331 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
HOXC6-202ENST00000394331 FAM168BA1KXE4 195 aa11.76□□□□□ -0.53
HOXC6-202ENST00000394331 STAB1Q9NY15 2570 aa11.76□□□□□ -0.53
HOXC6-202ENST00000394331 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
HOXC6-202ENST00000394331 SPAG11AQ6PDA7 123 aa11.74□□□□□ -0.53
HOXC6-202ENST00000394331 REG3GQ6UW15 175 aa11.73□□□□□ -0.53
HOXC6-202ENST00000394331 K7EIL1 84 aa11.73□□□□□ -0.53
HOXC6-202ENST00000394331 SPINK7P58062 85 aa11.73□□□□□ -0.53
HOXC6-202ENST00000394331 LINC00472Q9H8W2 130 aa11.73□□□□□ -0.53
HOXC6-202ENST00000394331 FBN1P35555 2871 aaKnown RBP11.72□□□□□ -0.53
HOXC6-202ENST00000394331 A0A0G2JQZ4 141 aa11.72□□□□□ -0.53
HOXC6-202ENST00000394331 A0A1W2PNN7 141 aa11.72□□□□□ -0.53
HOXC6-202ENST00000394331 ANK2Q01484 3957 aa11.71□□□□□ -0.53
HOXC6-202ENST00000394331 TP53AIP1Q9HCN2 124 aa11.7□□□□□ -0.54
HOXC6-202ENST00000394331 ASB16-AS1Q495Z4 193 aa11.7□□□□□ -0.54
HOXC6-202ENST00000394331 MMP24-AS1A0A0U1RRL7 71 aa11.69□□□□□ -0.54
HOXC6-202ENST00000394331 CMYA5Q8N3K9 4069 aa11.68□□□□□ -0.54
HOXC6-202ENST00000394331 FLNBO75369 2602 aaKnown RBP11.68□□□□□ -0.54
HOXC6-202ENST00000394331 DNAH3Q8TD57 4116 aa11.68□□□□□ -0.54
HOXC6-202ENST00000394331 A0A087X002 238 aa11.67□□□□□ -0.54
HOXC6-202ENST00000394331 LINC00313P59037 77 aa11.67□□□□□ -0.54
HOXC6-202ENST00000394331 Q6ZR54 194 aa11.66□□□□□ -0.54
HOXC6-202ENST00000394331 MAST4O15021 2626 aa11.66□□□□□ -0.54
HOXC6-202ENST00000394331 NOTCH1P46531 2555 aa11.64□□□□□ -0.55
HOXC6-202ENST00000394331 HRES1P13985 223 aa11.63□□□□□ -0.55
HOXC6-202ENST00000394331 PLA2G1BP04054 148 aaKnown RBP11.63□□□□□ -0.55
HOXC6-202ENST00000394331 PCOTHQ58A44 107 aa11.62□□□□□ -0.55
HOXC6-202ENST00000394331 SPRR1BP22528 89 aa11.6□□□□□ -0.55
HOXC6-202ENST00000394331 IGKV2-24A0A0C4DH68 120 aa11.58□□□□□ -0.56
HOXC6-202ENST00000394331 LINC01554Q52M75 96 aa11.57□□□□□ -0.56
HOXC6-202ENST00000394331 KRTAP1-5Q9BYS1 174 aa11.57□□□□□ -0.56
HOXC6-202ENST00000394331 A0A096LNI7 61 aa11.56□□□□□ -0.56
HOXC6-202ENST00000394331 UBE2DNLQ8IWF7 75 aa11.55□□□□□ -0.56
HOXC6-202ENST00000394331 H0Y9J4 135 aa11.55□□□□□ -0.56
HOXC6-202ENST00000394331 BAHCC1Q9P281 2608 aa11.54□□□□□ -0.56
HOXC6-202ENST00000394331 C14orf177Q52M58 125 aa11.54□□□□□ -0.56
HOXC6-202ENST00000394331 DNAH1Q9P2D7 4330 aa11.54□□□□□ -0.56
HOXC6-202ENST00000394331 HUWE1Q7Z6Z7 4374 aaKnown RBP11.52□□□□□ -0.56
HOXC6-202ENST00000394331 COL6A5A8TX70 2615 aa11.52□□□□□ -0.57
HOXC6-202ENST00000394331 PRLHP81277 87 aa11.52□□□□□ -0.57
HOXC6-202ENST00000394331 PRAC1Q96KF2 57 aa11.51□□□□□ -0.57
HOXC6-202ENST00000394331 APLNQ9ULZ1 77 aa11.51□□□□□ -0.57
HOXC6-202ENST00000394331 NBEAL1Q6ZS30 2694 aa11.49□□□□□ -0.57
HOXC6-202ENST00000394331 H3BS24 57 aa11.46□□□□□ -0.57
HOXC6-202ENST00000394331 RTL8CO15255 209 aa11.46□□□□□ -0.58
HOXC6-202ENST00000394331 C8orf17Q9NRJ1 99 aa11.45□□□□□ -0.58
HOXC6-202ENST00000394331 Q96NJ1 140 aa11.43□□□□□ -0.58
HOXC6-202ENST00000394331 ADM2Q7Z4H4 148 aa11.4□□□□□ -0.58
HOXC6-202ENST00000394331 CHTF8P0CG12 524 aa11.39□□□□□ -0.59
HOXC6-202ENST00000394331 SPATA8Q6RVD6 105 aa11.39□□□□□ -0.59
HOXC6-202ENST00000394331 MGAM2Q2M2H8 2515 aa11.39□□□□□ -0.59
HOXC6-202ENST00000394331 PRR26Q8N8Z3 221 aa11.37□□□□□ -0.59
HOXC6-202ENST00000394331 NBDYA0A0U1RRE5 68 aa11.36□□□□□ -0.59
HOXC6-202ENST00000394331 KRTAP11-1Q8IUC1 163 aa11.35□□□□□ -0.59
HOXC6-202ENST00000394331 MRPL34Q9BQ48 92 aaKnown RBP11.35□□□□□ -0.59
HOXC6-202ENST00000394331 ACYP2P14621 99 aa11.35□□□□□ -0.59
HOXC6-202ENST00000394331 A0A1B0GVX0 72 aa11.34□□□□□ -0.59
HOXC6-202ENST00000394331 STAB2Q8WWQ8 2551 aa11.34□□□□□ -0.59
HOXC6-202ENST00000394331 MDFIQ99750 246 aa11.33□□□□□ -0.6
HOXC6-202ENST00000394331 NUPR2A6NF83 97 aa11.33□□□□□ -0.6
HOXC6-202ENST00000394331 ALMS1Q8TCU4 4167 aa11.33□□□□□ -0.6
HOXC6-202ENST00000394331 TENM2Q9NT68 2774 aa11.32□□□□□ -0.6
HOXC6-202ENST00000394331 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms