RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 SMIM29Q86T20 159 aa12.05□□□□□ -0.48
RAB5C-202ENST00000393860 LINC00846Q9NV44 126 aa12.05□□□□□ -0.48
RAB5C-202ENST00000393860 SRRM2Q9UQ35 2752 aaKnown RBP12.04□□□□□ -0.48
RAB5C-202ENST00000393860 A0A1B0GVY2 172 aa11.99□□□□□ -0.49
RAB5C-202ENST00000393860 PDE6GP18545 87 aa11.99□□□□□ -0.49
RAB5C-202ENST00000393860 PKHD1P08F94 4074 aa11.98□□□□□ -0.49
RAB5C-202ENST00000393860 A0A0G2JQZ4 141 aa11.98□□□□□ -0.49
RAB5C-202ENST00000393860 F8WEM9 126 aa11.97□□□□□ -0.49
RAB5C-202ENST00000393860 ZNF861PO60384 105 aa11.97□□□□□ -0.49
RAB5C-202ENST00000393860 IGLV7-43P04211 117 aa11.96□□□□□ -0.5
RAB5C-202ENST00000393860 SPRR1BP22528 89 aa11.95□□□□□ -0.5
RAB5C-202ENST00000393860 SPRR4Q96PI1 79 aa11.94□□□□□ -0.5
RAB5C-202ENST00000393860 LINC00643Q86TS7 51 aa11.93□□□□□ -0.5
RAB5C-202ENST00000393860 LRP1BQ9NZR2 4599 aa11.92□□□□□ -0.5
RAB5C-202ENST00000393860 A0A1W2PNM2 257 aa11.91□□□□□ -0.5
RAB5C-202ENST00000393860 DYNC1H1Q14204 4646 aaKnown RBP11.9□□□□□ -0.5
RAB5C-202ENST00000393860 IGFL1Q6UW32 110 aa11.9□□□□□ -0.51
RAB5C-202ENST00000393860 ANAPC11Q9NYG5 84 aa11.9□□□□□ -0.51
RAB5C-202ENST00000393860 IGKV3D-7A0A0C4DH55 119 aa11.89□□□□□ -0.51
RAB5C-202ENST00000393860 UBL5Q9BZL1 73 aa11.88□□□□□ -0.51
RAB5C-202ENST00000393860 ZNF706Q9Y5V0 76 aaPredicted RBP11.87□□□□□ -0.51
RAB5C-202ENST00000393860 IGLV9-49A0A0B4J1Y8 123 aa11.86□□□□□ -0.51
RAB5C-202ENST00000393860 Q8NBF4 154 aa11.86□□□□□ -0.51
RAB5C-202ENST00000393860 SS18L2Q9UHA2 77 aa11.86□□□□□ -0.51
RAB5C-202ENST00000393860 IGLV8-61A0A075B6I0 122 aa11.86□□□□□ -0.51
RAB5C-202ENST00000393860 Q6ZVQ6 151 aa11.86□□□□□ -0.51
RAB5C-202ENST00000393860 LINC00483Q53H64 154 aa11.85□□□□□ -0.51
RAB5C-202ENST00000393860 Q6JHZ5 121 aa11.84□□□□□ -0.51
RAB5C-202ENST00000393860 C9orf153Q5TBE3 101 aa11.83□□□□□ -0.52
RAB5C-202ENST00000393860 RYR3Q15413 4870 aa11.81□□□□□ -0.52
RAB5C-202ENST00000393860 TRBV7-7A0A0K0K1E9 115 aa11.81□□□□□ -0.52
RAB5C-202ENST00000393860 SMR3BP02814 79 aaPredicted RBP11.8□□□□□ -0.52
RAB5C-202ENST00000393860 C5orf47Q569G3 176 aa11.8□□□□□ -0.52
RAB5C-202ENST00000393860 MOBPQ13875 183 aa11.76□□□□□ -0.53
RAB5C-202ENST00000393860 CRYGAP11844 174 aa11.76□□□□□ -0.53
RAB5C-202ENST00000393860 NREPQ16612 68 aa11.76□□□□□ -0.53
RAB5C-202ENST00000393860 VPS13BQ7Z7G8 4022 aa11.75□□□□□ -0.53
RAB5C-202ENST00000393860 Q6Q795 121 aa11.75□□□□□ -0.53
RAB5C-202ENST00000393860 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
RAB5C-202ENST00000393860 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
RAB5C-202ENST00000393860 SMIM20Q8N5G0 67 aa11.74□□□□□ -0.53
RAB5C-202ENST00000393860 A0A087WSZ3 146 aa11.72□□□□□ -0.53
RAB5C-202ENST00000393860 ATP5EP2Q5VTU8 51 aa11.72□□□□□ -0.53
RAB5C-202ENST00000393860 A0A087WVE0 104 aa11.72□□□□□ -0.53
RAB5C-202ENST00000393860 HIST1H4AP62805 103 aaKnown RBP11.72□□□□□ -0.53
RAB5C-202ENST00000393860 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.53
RAB5C-202ENST00000393860 IMUPQ9GZP8 106 aa11.71□□□□□ -0.53
RAB5C-202ENST00000393860 A0A1B0GW54 56 aa11.7□□□□□ -0.54
RAB5C-202ENST00000393860 FAM236AA0A1B0GUQ0 79 aa11.66□□□□□ -0.54
RAB5C-202ENST00000393860 FAM236BA0A1B0GV22 79 aa11.66□□□□□ -0.54
RAB5C-202ENST00000393860 CXCL6P80162 114 aa11.66□□□□□ -0.54
RAB5C-202ENST00000393860 A0A087X002 238 aa11.65□□□□□ -0.54
RAB5C-202ENST00000393860 Q8N9L7 120 aa11.65□□□□□ -0.54
RAB5C-202ENST00000393860 BPY2O14599 106 aa11.64□□□□□ -0.55
RAB5C-202ENST00000393860 DEFB116Q30KQ4 102 aa11.64□□□□□ -0.55
RAB5C-202ENST00000393860 KRTAP1-4P0C5Y4 121 aa11.62□□□□□ -0.55
RAB5C-202ENST00000393860 KRTAP13-2Q52LG2 175 aa11.6□□□□□ -0.55
RAB5C-202ENST00000393860 FAT1Q14517 4588 aa11.6□□□□□ -0.55
RAB5C-202ENST00000393860 ANAPC13Q9BS18 74 aa11.59□□□□□ -0.55
RAB5C-202ENST00000393860 KRTAP10-4P60372 401 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-202ENST00000393860 SPINK6Q6UWN8 80 aa11.58□□□□□ -0.56
RAB5C-202ENST00000393860 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
RAB5C-202ENST00000393860 IGKV4-1P06312 121 aa11.55□□□□□ -0.56
RAB5C-202ENST00000393860 PLA2G1BP04054 148 aaKnown RBP11.54□□□□□ -0.56
RAB5C-202ENST00000393860 DSCR10P59022 87 aa11.54□□□□□ -0.56
RAB5C-202ENST00000393860 SSBP3-AS1Q7Z2R9 100 aa11.53□□□□□ -0.56
RAB5C-202ENST00000393860 K7EQZ3 153 aa11.51□□□□□ -0.57
RAB5C-202ENST00000393860 LINC00472Q9H8W2 130 aa11.51□□□□□ -0.57
RAB5C-202ENST00000393860 Q96NJ1 140 aa11.47□□□□□ -0.57
RAB5C-202ENST00000393860 PRR26Q8N8Z3 221 aa11.47□□□□□ -0.57
RAB5C-202ENST00000393860 HSPG2P98160 4391 aa11.45□□□□□ -0.58
RAB5C-202ENST00000393860 TYMSOSQ8TAI1 123 aa11.45□□□□□ -0.58
RAB5C-202ENST00000393860 CDK2AP2O75956 126 aa11.45□□□□□ -0.58
RAB5C-202ENST00000393860 CD164Q04900 197 aa11.44□□□□□ -0.58
RAB5C-202ENST00000393860 FAM229AH3BQW9 127 aa11.43□□□□□ -0.58
RAB5C-202ENST00000393860 ATOX1O00244 68 aa11.43□□□□□ -0.58
RAB5C-202ENST00000393860 Q5VSD8 79 aa11.41□□□□□ -0.58
RAB5C-202ENST00000393860 CCDC179H3BU77 68 aa11.4□□□□□ -0.58
RAB5C-202ENST00000393860 KRTAP17-1Q9BYP8 105 aa11.39□□□□□ -0.59
RAB5C-202ENST00000393860 EPPK1P58107 5090 aaKnown RBP11.39□□□□□ -0.59
RAB5C-202ENST00000393860 RYR1P21817 5038 aa11.38□□□□□ -0.59
RAB5C-202ENST00000393860 A8MWP4 228 aa11.38□□□□□ -0.59
RAB5C-202ENST00000393860 J3KT08 172 aa11.37□□□□□ -0.59
RAB5C-202ENST00000393860 PKHD1L1Q86WI1 4243 aa11.37□□□□□ -0.59
RAB5C-202ENST00000393860 PRR15Q8IV56 129 aa11.35□□□□□ -0.59
RAB5C-202ENST00000393860 WFDC13Q8IUB5 93 aa11.34□□□□□ -0.59
RAB5C-202ENST00000393860 HCG22E2RYF7 251 aa11.33□□□□□ -0.6
RAB5C-202ENST00000393860 C4orf48Q5BLP8 95 aa11.33□□□□□ -0.6
RAB5C-202ENST00000393860 LINC00304Q8N9R0 145 aa11.31□□□□□ -0.6
RAB5C-202ENST00000393860 KIAA1109Q2LD37 5005 aa11.3□□□□□ -0.6
RAB5C-202ENST00000393860 NDUFB1O75438 58 aa11.3□□□□□ -0.6
RAB5C-202ENST00000393860 SERP2Q8N6R1 65 aa11.29□□□□□ -0.6
RAB5C-202ENST00000393860 IGHV6-1A0A0B4J1U7 121 aa11.29□□□□□ -0.6
RAB5C-202ENST00000393860 RPS28P62857 69 aaKnown RBP11.29□□□□□ -0.6
RAB5C-202ENST00000393860 COX7CP15954 63 aa11.28□□□□□ -0.6
RAB5C-202ENST00000393860 ASB16-AS1Q495Z4 193 aa11.27□□□□□ -0.6
RAB5C-202ENST00000393860 LIMD2Q9BT23 127 aa11.27□□□□□ -0.61
RAB5C-202ENST00000393860 C1orf195Q5TG92 126 aa11.26□□□□□ -0.61
RAB5C-202ENST00000393860 A0A1B0GVX0 72 aa11.25□□□□□ -0.61
RAB5C-202ENST00000393860 MMP24-AS1A0A0U1RRL7 71 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms