RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 LINC00476Q8WZB0 136 aa11.46□□□□□ -0.58
ERCC2-201ENST00000391941 STAB2Q8WWQ8 2551 aa11.45□□□□□ -0.58
ERCC2-201ENST00000391941 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.44□□□□□ -0.58
ERCC2-201ENST00000391941 A0A1B0GW54 56 aa11.44□□□□□ -0.58
ERCC2-201ENST00000391941 C1orf64Q8NEQ6 169 aa11.44□□□□□ -0.58
ERCC2-201ENST00000391941 SPRR4Q96PI1 79 aa11.44□□□□□ -0.58
ERCC2-201ENST00000391941 DNAH9Q9NYC9 4486 aa11.44□□□□□ -0.58
ERCC2-201ENST00000391941 IGLV5-37A0A075B6J1 123 aa11.43□□□□□ -0.58
ERCC2-201ENST00000391941 PSPHP1O15172 72 aa11.42□□□□□ -0.58
ERCC2-201ENST00000391941 PSCAO43653 123 aa11.42□□□□□ -0.58
ERCC2-201ENST00000391941 A0A096LNI7 61 aa11.42□□□□□ -0.58
ERCC2-201ENST00000391941 LCE6AA0A183 80 aa11.41□□□□□ -0.58
ERCC2-201ENST00000391941 MGAM2Q2M2H8 2515 aa11.41□□□□□ -0.58
ERCC2-201ENST00000391941 A0A087WSZ3 146 aa11.41□□□□□ -0.58
ERCC2-201ENST00000391941 IGFL1Q6UW32 110 aa11.4□□□□□ -0.58
ERCC2-201ENST00000391941 hDV103S1A0JD37 113 aa11.38□□□□□ -0.59
ERCC2-201ENST00000391941 REG3GQ6UW15 175 aa11.38□□□□□ -0.59
ERCC2-201ENST00000391941 HCG22E2RYF7 251 aa11.36□□□□□ -0.59
ERCC2-201ENST00000391941 KRTAP11-1Q8IUC1 163 aa11.36□□□□□ -0.59
ERCC2-201ENST00000391941 CHTF8P0CG12 524 aa11.35□□□□□ -0.59
ERCC2-201ENST00000391941 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
ERCC2-201ENST00000391941 HUWE1Q7Z6Z7 4374 aaKnown RBP11.35□□□□□ -0.59
ERCC2-201ENST00000391941 DNAH7Q8WXX0 4024 aa11.34□□□□□ -0.59
ERCC2-201ENST00000391941 A8MU10 97 aa11.33□□□□□ -0.6
ERCC2-201ENST00000391941 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
ERCC2-201ENST00000391941 LINC00208Q96KT6 92 aa11.3□□□□□ -0.6
ERCC2-201ENST00000391941 PHF5AQ7RTV0 110 aaKnown RBP11.27□□□□□ -0.6
ERCC2-201ENST00000391941 KRTAP24-1Q3LI83 254 aa11.27□□□□□ -0.61
ERCC2-201ENST00000391941 DNAH3Q8TD57 4116 aa11.26□□□□□ -0.61
ERCC2-201ENST00000391941 CD164Q04900 197 aa11.26□□□□□ -0.61
ERCC2-201ENST00000391941 PMAIP1Q13794 54 aa11.25□□□□□ -0.61
ERCC2-201ENST00000391941 UBE2AP49459 152 aa11.24□□□□□ -0.61
ERCC2-201ENST00000391941 TRAV22A0A0B4J277 110 aa11.24□□□□□ -0.61
ERCC2-201ENST00000391941 A8MUN3 132 aa11.22□□□□□ -0.61
ERCC2-201ENST00000391941 Q1T7F1 81 aa11.18□□□□□ -0.62
ERCC2-201ENST00000391941 IGLV8-61A0A075B6I0 122 aa11.18□□□□□ -0.62
ERCC2-201ENST00000391941 CNBPP62633 177 aaKnown RBP11.18□□□□□ -0.62
ERCC2-201ENST00000391941 C16orf90A8MZG2 172 aa11.17□□□□□ -0.62
ERCC2-201ENST00000391941 H3BS24 57 aa11.17□□□□□ -0.62
ERCC2-201ENST00000391941 CYP4F30PQ9H0H9 118 aa11.17□□□□□ -0.62
ERCC2-201ENST00000391941 H0Y9P7 68 aa11.17□□□□□ -0.62
ERCC2-201ENST00000391941 MP68P56378 58 aa11.17□□□□□ -0.62
ERCC2-201ENST00000391941 CASC2Q6XLA1 102 aa11.17□□□□□ -0.62
ERCC2-201ENST00000391941 H0Y9J4 135 aa11.15□□□□□ -0.62
ERCC2-201ENST00000391941 KRTAP29-1A8MX34 341 aaPredicted RBP11.15□□□□□ -0.62
ERCC2-201ENST00000391941 FRAS1Q86XX4 4008 aa11.14□□□□□ -0.63
ERCC2-201ENST00000391941 PANO1I0J062 215 aa11.14□□□□□ -0.63
ERCC2-201ENST00000391941 NDUFB1O75438 58 aa11.14□□□□□ -0.63
ERCC2-201ENST00000391941 B9D2Q9BPU9 175 aa11.12□□□□□ -0.63
ERCC2-201ENST00000391941 PRR15Q8IV56 129 aa11.11□□□□□ -0.63
ERCC2-201ENST00000391941 PCOTHQ58A44 107 aa11.1□□□□□ -0.63
ERCC2-201ENST00000391941 IGLV9-49A0A0B4J1Y8 123 aa11.09□□□□□ -0.63
ERCC2-201ENST00000391941 K7EIL1 84 aa11.08□□□□□ -0.64
ERCC2-201ENST00000391941 PLECQ15149 4684 aaKnown RBP11.08□□□□□ -0.64
ERCC2-201ENST00000391941 LINC00472Q9H8W2 130 aa11.06□□□□□ -0.64
ERCC2-201ENST00000391941 A8MWP4 228 aa11.05□□□□□ -0.64
ERCC2-201ENST00000391941 Q5VV11 94 aa11.04□□□□□ -0.64
ERCC2-201ENST00000391941 ANAPC11Q9NYG5 84 aa11.04□□□□□ -0.64
ERCC2-201ENST00000391941 UBE2DNLQ8IWF7 75 aa11.04□□□□□ -0.64
ERCC2-201ENST00000391941 SPRR1BP22528 89 aa11.02□□□□□ -0.65
ERCC2-201ENST00000391941 PRR15LQ9BU68 103 aa11.02□□□□□ -0.65
ERCC2-201ENST00000391941 CHKB-CPT1BH3BT56 60 aa11.01□□□□□ -0.65
ERCC2-201ENST00000391941 MMP24-AS1A0A0U1RRL7 71 aa10.99□□□□□ -0.65
ERCC2-201ENST00000391941 Q8N9P0 234 aaPredicted RBP10.99□□□□□ -0.65
ERCC2-201ENST00000391941 SPANXA2-OT1Q8N9U9 137 aa10.99□□□□□ -0.65
ERCC2-201ENST00000391941 H3BPC8 53 aa10.97□□□□□ -0.65
ERCC2-201ENST00000391941 NDUFS5O43920 106 aa10.96□□□□□ -0.66
ERCC2-201ENST00000391941 C9orf163Q8N9P6 203 aa10.95□□□□□ -0.66
ERCC2-201ENST00000391941 SPTSSBQ8NFR3 76 aa10.95□□□□□ -0.66
ERCC2-201ENST00000391941 COA5Q86WW8 74 aa10.94□□□□□ -0.66
ERCC2-201ENST00000391941 A0A087X002 238 aa10.94□□□□□ -0.66
ERCC2-201ENST00000391941 NOTCH2NLQ7Z3S9 236 aa10.94□□□□□ -0.66
ERCC2-201ENST00000391941 IGHV6-1A0A0B4J1U7 121 aa10.93□□□□□ -0.66
ERCC2-201ENST00000391941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.93□□□□□ -0.66
ERCC2-201ENST00000391941 C14orf177Q52M58 125 aa10.91□□□□□ -0.66
ERCC2-201ENST00000391941 DNAH8Q96JB1 4490 aa10.91□□□□□ -0.66
ERCC2-201ENST00000391941 TGP01266 2768 aa10.91□□□□□ -0.66
ERCC2-201ENST00000391941 MOBPQ13875 183 aa10.91□□□□□ -0.66
ERCC2-201ENST00000391941 SPAG11AQ6PDA7 123 aa10.9□□□□□ -0.66
ERCC2-201ENST00000391941 Q96NJ1 140 aa10.9□□□□□ -0.66
ERCC2-201ENST00000391941 RBM12B-AS1Q9P1G2 102 aa10.9□□□□□ -0.67
ERCC2-201ENST00000391941 KRTAP13-1Q8IUC0 172 aa10.88□□□□□ -0.67
ERCC2-201ENST00000391941 APLNQ9ULZ1 77 aa10.87□□□□□ -0.67
ERCC2-201ENST00000391941 STARD9Q9P2P6 4700 aa10.87□□□□□ -0.67
ERCC2-201ENST00000391941 KMT2AQ03164 3969 aa10.87□□□□□ -0.67
ERCC2-201ENST00000391941 LCA10Q71F78 164 aa10.86□□□□□ -0.67
ERCC2-201ENST00000391941 A6NED7 52 aa10.85□□□□□ -0.67
ERCC2-201ENST00000391941 LIMD2Q9BT23 127 aa10.85□□□□□ -0.67
ERCC2-201ENST00000391941 IGLV7-46A0A075B6I9 117 aa10.84□□□□□ -0.67
ERCC2-201ENST00000391941 SPINK6Q6UWN8 80 aa10.84□□□□□ -0.67
ERCC2-201ENST00000391941 PRR26Q8N8Z3 221 aa10.83□□□□□ -0.68
ERCC2-201ENST00000391941 HECTD4Q9Y4D8 3996 aa10.83□□□□□ -0.68
ERCC2-201ENST00000391941 C8orf17Q9NRJ1 99 aa10.81□□□□□ -0.68
ERCC2-201ENST00000391941 DNAH17Q9UFH2 4485 aa10.8□□□□□ -0.68
ERCC2-201ENST00000391941 ASB16-AS1Q495Z4 193 aa10.8□□□□□ -0.68
ERCC2-201ENST00000391941 FBN3Q75N90 2809 aa10.79□□□□□ -0.68
ERCC2-201ENST00000391941 DNAH2Q9P225 4427 aa10.77□□□□□ -0.68
ERCC2-201ENST00000391941 MEGF8Q7Z7M0 2845 aa10.77□□□□□ -0.69
ERCC2-201ENST00000391941 DYNC2H1Q8NCM8 4307 aaKnown RBP10.76□□□□□ -0.69
ERCC2-201ENST00000391941 NBDYA0A0U1RRE5 68 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms