RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 LRP2P98164 4655 aa-0.02□□□□□ -2.41
SNORA48.1-201ENST00000390879 LRRIQ1Q96JM4 1722 aa-0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 A0A087WWC5 75 aa-0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 SMIM31A0A1B0GVY4 71 aa-0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 FCER1GP30273 86 aa-0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 MADDQ8WXG6 1647 aa-0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 NCOR1O75376 2440 aa-0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 ABCC6O95255 1503 aa-0.03□□□□□ -2.41
SNORA48.1-201ENST00000390879 TIAM2Q8IVF5 1701 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 ABCA9Q8IUA7 1624 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 RPS27P42677 84 aaKnown RBP-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 WT1-ASQ06250 92 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 NCBP2-AS2Q69YL0 99 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 RPS27LQ71UM5 84 aaKnown RBP-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 C6orf48Q9UBA6 75 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 DNMBPQ6XZF7 1577 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 EFCAB5A4FU69 1503 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 LRP1BQ9NZR2 4599 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 SCN11AQ9UI33 1791 aa-0.04□□□□□ -2.42
SNORA48.1-201ENST00000390879 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
SNORA48.1-201ENST00000390879 M0R1W7 72 aa-0.05□□□□□ -2.42
SNORA48.1-201ENST00000390879 SFTA3P0C7M3 94 aa-0.05□□□□□ -2.42
SNORA48.1-201ENST00000390879 SPRR2AP35326 72 aa-0.05□□□□□ -2.42
SNORA48.1-201ENST00000390879 CHD8Q9HCK8 2581 aa-0.05□□□□□ -2.42
SNORA48.1-201ENST00000390879 KIAA0586Q9BVV6 1533 aa-0.06□□□□□ -2.42
SNORA48.1-201ENST00000390879 DDX60LQ5H9U9 1706 aaKnown RBP-0.06□□□□□ -2.42
SNORA48.1-201ENST00000390879 C9orf92A6NGG3 77 aa-0.06□□□□□ -2.42
SNORA48.1-201ENST00000390879 K7EMI3 77 aa-0.06□□□□□ -2.42
SNORA48.1-201ENST00000390879 FLNCQ14315 2725 aa-0.06□□□□□ -2.42
SNORA48.1-201ENST00000390879 HECTD4Q9Y4D8 3996 aa-0.06□□□□□ -2.42
SNORA48.1-201ENST00000390879 REV3LO60673 3130 aa-0.06□□□□□ -2.42
SNORA48.1-201ENST00000390879 NSD1Q96L73 2696 aaPredicted RBP-0.06□□□□□ -2.42
SNORA48.1-201ENST00000390879 THOC2Q8NI27 1593 aaKnown RBP-0.07□□□□□ -2.42
SNORA48.1-201ENST00000390879 SPTA1P02549 2419 aa-0.07□□□□□ -2.42
SNORA48.1-201ENST00000390879 AKAP13Q12802 2813 aa-0.08□□□□□ -2.42
SNORA48.1-201ENST00000390879 PCNX1Q96RV3 2341 aa-0.08□□□□□ -2.42
SNORA48.1-201ENST00000390879 SMIM5Q71RC9 77 aa-0.08□□□□□ -2.42
SNORA48.1-201ENST00000390879 NMES1Q9C002 83 aa-0.08□□□□□ -2.42
SNORA48.1-201ENST00000390879 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.08□□□□□ -2.42
SNORA48.1-201ENST00000390879 SETXQ7Z333 2677 aaKnown RBP-0.08□□□□□ -2.42
SNORA48.1-201ENST00000390879 NRAPQ86VF7 1730 aa-0.08□□□□□ -2.42
SNORA48.1-201ENST00000390879 APC2O95996 2303 aa-0.08□□□□□ -2.42
SNORA48.1-201ENST00000390879 RNF17Q9BXT8 1623 aaKnown RBP-0.09□□□□□ -2.42
SNORA48.1-201ENST00000390879 INO80Q9ULG1 1556 aaPredicted RBP-0.09□□□□□ -2.42
SNORA48.1-201ENST00000390879 SERF2P84101 59 aa-0.09□□□□□ -2.42
SNORA48.1-201ENST00000390879 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
SNORA48.1-201ENST00000390879 NHSQ6T4R5 1651 aa-0.09□□□□□ -2.42
SNORA48.1-201ENST00000390879 MROH1Q8NDA8 1641 aa-0.09□□□□□ -2.42
SNORA48.1-201ENST00000390879 ACANP16112 2415 aa-0.09□□□□□ -2.42
SNORA48.1-201ENST00000390879 TJP1Q07157 1748 aa-0.1□□□□□ -2.42
SNORA48.1-201ENST00000390879 ITSN1Q15811 1721 aa-0.1□□□□□ -2.42
SNORA48.1-201ENST00000390879 PKHD1P08F94 4074 aa-0.1□□□□□ -2.42
SNORA48.1-201ENST00000390879 MAP1BP46821 2468 aaKnown RBP-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 KNL1Q8NG31 2342 aa-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 STAB1Q9NY15 2570 aa-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 H3BUA1 57 aa-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 SPRR2EP22531 72 aa-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 KRTAP19-7Q3SYF9 63 aa-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 TRANK1O15050 2925 aa-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 CNOT1A5YKK6 2376 aaKnown RBP-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 FLNAP21333 2647 aaKnown RBP-0.1□□□□□ -2.43
SNORA48.1-201ENST00000390879 ZC3H13Q5T200 1668 aaKnown RBP-0.11□□□□□ -2.43
SNORA48.1-201ENST00000390879 WNK1Q9H4A3 2382 aa-0.11□□□□□ -2.43
SNORA48.1-201ENST00000390879 COL6A3P12111 3177 aa-0.11□□□□□ -2.43
SNORA48.1-201ENST00000390879 DEFB110Q30KQ9 67 aa-0.11□□□□□ -2.43
SNORA48.1-201ENST00000390879 PARP4Q9UKK3 1724 aaKnown RBP-0.11□□□□□ -2.43
SNORA48.1-201ENST00000390879 MUC12Q9UKN1 5478 aa-0.11□□□□□ -2.43
SNORA48.1-201ENST00000390879 MUC2Q02817 5179 aa-0.11□□□□□ -2.43
SNORA48.1-201ENST00000390879 EEA1Q15075 1411 aa-0.12□□□□□ -2.43
SNORA48.1-201ENST00000390879 CPS1P31327 1500 aa-0.12□□□□□ -2.43
SNORA48.1-201ENST00000390879 IGLV5-48A0A075B6I7 105 aa-0.12□□□□□ -2.43
SNORA48.1-201ENST00000390879 IGIPA6NJ69 53 aa-0.12□□□□□ -2.43
SNORA48.1-201ENST00000390879 LINC00308Q8TCZ7 52 aa-0.12□□□□□ -2.43
SNORA48.1-201ENST00000390879 FLNBO75369 2602 aaKnown RBP-0.12□□□□□ -2.43
SNORA48.1-201ENST00000390879 HECTD1Q9ULT8 2610 aa-0.13□□□□□ -2.43
SNORA48.1-201ENST00000390879 PKD1P98161 4303 aa-0.13□□□□□ -2.43
SNORA48.1-201ENST00000390879 TMEM167BQ9NRX6 74 aa-0.13□□□□□ -2.43
SNORA48.1-201ENST00000390879 ABRACLQ9P1F3 81 aa-0.13□□□□□ -2.43
SNORA48.1-201ENST00000390879 DCHS2Q6V1P9 2916 aa-0.13□□□□□ -2.43
SNORA48.1-201ENST00000390879 PDE4DIPQ5VU43 2346 aa-0.13□□□□□ -2.43
SNORA48.1-201ENST00000390879 ZANQ9Y493 2812 aa-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 MACF1Q9UPN3 7388 aaKnown RBP-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 TNRC18O15417 2968 aaPredicted RBP-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 HERC1Q15751 4861 aa-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 SVEP1Q4LDE5 3571 aa-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 MT1AP04731 61 aa-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 NOP10Q9NPE3 64 aaKnown RBP-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 ABCA6Q8N139 1617 aa-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 STAB2Q8WWQ8 2551 aa-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 C3P01024 1663 aa-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 ITSN2Q9NZM3 1697 aa-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 KMT2CQ8NEZ4 4911 aaKnown RBP-0.14□□□□□ -2.43
SNORA48.1-201ENST00000390879 KRTAP19-8Q3LI54 63 aa-0.15□□□□□ -2.43
SNORA48.1-201ENST00000390879 SPRR2FQ96RM1 72 aa-0.15□□□□□ -2.43
SNORA48.1-201ENST00000390879 KAAG1Q9UBP8 84 aa-0.15□□□□□ -2.43
SNORA48.1-201ENST00000390879 FLGP20930 4061 aaPredicted RBP-0.15□□□□□ -2.43
SNORA48.1-201ENST00000390879 FAT1Q14517 4588 aa-0.15□□□□□ -2.43
SNORA48.1-201ENST00000390879 CLASP1Q7Z460 1538 aa-0.15□□□□□ -2.43
SNORA48.1-201ENST00000390879 SRRM2Q9UQ35 2752 aaKnown RBP-0.15□□□□□ -2.43
SNORA48.1-201ENST00000390879 KIF1AQ12756 1690 aa-0.15□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms