RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 MYH4Q9Y623 1939 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 F8WEM9 126 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 LYNX1G3V0Z9 82 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 SNAPC5O75971 98 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 LEPROTL1O95214 131 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 SVBPQ8N300 66 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 GAFA1Q96PS6 74 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 PAIP2BQ9ULR5 123 aaKnown RBP-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 RAPGEF2Q9Y4G8 1499 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 RGPD1P0DJD0 1748 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 SUPT6HQ7KZ85 1726 aaKnown RBP-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 TOGARAM1Q9Y4F4 1720 aa-1.32□□□□□ -2.62
SNORD28-201ENST00000384706 ANKRD36BQ8N2N9 1353 aa-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 NWD1Q149M9 1564 aa-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 ETDBQ3ZM63 59 aa-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 ALKAL2Q6UX46 152 aa-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 TRGV9Q99603 122 aa-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 PARP4Q9UKK3 1724 aaKnown RBP-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 MYOM2P54296 1465 aa-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 TEX14Q8IWB6 1497 aa-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 DNAH5Q8TE73 4624 aa-1.33□□□□□ -2.62
SNORD28-201ENST00000384706 SPHKAPQ2M3C7 1700 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 NRXN1Q9ULB1 1477 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 IQCF6A8MYZ5 107 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 H3BQ15 152 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 NDUFC1O43677 76 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 HMGN3Q15651 99 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 BOD1L1Q8NFC6 3051 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 NRKQ7Z2Y5 1582 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 DNAH10Q8IVF4 4471 aa-1.34□□□□□ -2.62
SNORD28-201ENST00000384706 POLR1AO95602 1720 aaPredicted RBP-1.35□□□□□ -2.62
SNORD28-201ENST00000384706 ABCA3Q99758 1704 aa-1.35□□□□□ -2.62
SNORD28-201ENST00000384706 FYCO1Q9BQS8 1478 aa-1.35□□□□□ -2.63
SNORD28-201ENST00000384706 IGLV5-48A0A075B6I7 105 aa-1.35□□□□□ -2.63
SNORD28-201ENST00000384706 MPC2O95563 127 aa-1.35□□□□□ -2.63
SNORD28-201ENST00000384706 LY75O60449 1722 aa-1.36□□□□□ -2.63
SNORD28-201ENST00000384706 ZNF720Q7Z2F6 126 aa-1.36□□□□□ -2.63
SNORD28-201ENST00000384706 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.36□□□□□ -2.63
SNORD28-201ENST00000384706 LTN1O94822 1766 aa-1.36□□□□□ -2.63
SNORD28-201ENST00000384706 DOT1LQ8TEK3 1739 aa-1.37□□□□□ -2.63
SNORD28-201ENST00000384706 LCE6AA0A183 80 aa-1.37□□□□□ -2.63
SNORD28-201ENST00000384706 A0A1B0GUT8 65 aa-1.37□□□□□ -2.63
SNORD28-201ENST00000384706 DEFB4AO15263 64 aa-1.37□□□□□ -2.63
SNORD28-201ENST00000384706 IER3IP1Q9Y5U9 82 aa-1.37□□□□□ -2.63
SNORD28-201ENST00000384706 PLIN4Q96Q06 1357 aa-1.37□□□□□ -2.63
SNORD28-201ENST00000384706 EIF4G3O43432 1585 aaKnown RBP-1.38□□□□□ -2.63
SNORD28-201ENST00000384706 FREM2Q5SZK8 3169 aa-1.38□□□□□ -2.63
SNORD28-201ENST00000384706 LINC01546A6NGU7 62 aa-1.38□□□□□ -2.63
SNORD28-201ENST00000384706 GNGT2O14610 69 aa-1.38□□□□□ -2.63
SNORD28-201ENST00000384706 DDX60LQ5H9U9 1706 aaKnown RBP-1.38□□□□□ -2.63
SNORD28-201ENST00000384706 PRDM15P57071 1507 aaPredicted RBP-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 NALCNQ8IZF0 1738 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 TRAV21A0A0B4J279 112 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 CYB5AP00167 134 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 ACYP1P07311 99 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 GNG4P50150 75 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 PPP3R1P63098 170 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 WT1-ASQ06250 92 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 PLGLAQ15195 96 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 PMCHL2Q9BQD1 86 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 ITSN2Q9NZM3 1697 aa-1.39□□□□□ -2.63
SNORD28-201ENST00000384706 UQCRHLA0A096LP55 91 aa-1.4□□□□□ -2.63
SNORD28-201ENST00000384706 CCDC58Q4VC31 144 aa-1.4□□□□□ -2.63
SNORD28-201ENST00000384706 ROCK2O75116 1388 aaKnown RBP-1.4□□□□□ -2.63
SNORD28-201ENST00000384706 PZPP20742 1482 aa-1.4□□□□□ -2.63
SNORD28-201ENST00000384706 MAST1Q9Y2H9 1570 aa-1.4□□□□□ -2.63
SNORD28-201ENST00000384706 CLTCQ00610 1675 aaKnown RBP-1.4□□□□□ -2.63
SNORD28-201ENST00000384706 PRUNE2Q8WUY3 3088 aa-1.41□□□□□ -2.63
SNORD28-201ENST00000384706 ATOX1O00244 68 aa-1.41□□□□□ -2.64
SNORD28-201ENST00000384706 NDUFA2O43678 99 aa-1.41□□□□□ -2.64
SNORD28-201ENST00000384706 KIF1AQ12756 1690 aa-1.42□□□□□ -2.64
SNORD28-201ENST00000384706 ITSN1Q15811 1721 aa-1.42□□□□□ -2.64
SNORD28-201ENST00000384706 S100A1P23297 94 aa-1.42□□□□□ -2.64
SNORD28-201ENST00000384706 S100PP25815 95 aa-1.42□□□□□ -2.64
SNORD28-201ENST00000384706 COL5A1-AS1Q5SY13 56 aa-1.42□□□□□ -2.64
SNORD28-201ENST00000384706 TSC22D3Q99576 134 aa-1.42□□□□□ -2.64
SNORD28-201ENST00000384706 NOP10Q9NPE3 64 aaKnown RBP-1.42□□□□□ -2.64
SNORD28-201ENST00000384706 KIAA0586Q9BVV6 1533 aa-1.42□□□□□ -2.64
SNORD28-201ENST00000384706 TMEM131LA2VDJ0 1609 aa-1.43□□□□□ -2.64
SNORD28-201ENST00000384706 CCNB3Q8WWL7 1395 aa-1.43□□□□□ -2.64
SNORD28-201ENST00000384706 GTF2H5Q6ZYL4 71 aa-1.43□□□□□ -2.64
SNORD28-201ENST00000384706 THOC2Q8NI27 1593 aaKnown RBP-1.43□□□□□ -2.64
SNORD28-201ENST00000384706 DIP2BQ9P265 1576 aa-1.43□□□□□ -2.64
SNORD28-201ENST00000384706 ZFHX4Q86UP3 3567 aa-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 PLCH1Q4KWH8 1693 aa-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 LOC105371267A0A1B0GV96 52 aa-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 NDUFB1O75438 58 aa-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 HMGN2P05204 90 aaKnown RBP-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 FAUP35544 74 aaKnown RBP-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 TMEM203Q969S6 136 aa-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 SMARCA2P51531 1590 aa-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 ATP10BO94823 1461 aa-1.44□□□□□ -2.64
SNORD28-201ENST00000384706 ZC3H13Q5T200 1668 aaKnown RBP-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 EPRSP07814 1512 aaKnown RBP-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 CRYBG3Q68DQ2 2970 aa-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 CORTO00230 105 aa-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 MT-ATP8P03928 68 aa-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 IFI27P40305 119 aaPredicted RBP-1.45□□□□□ -2.64
SNORD28-201ENST00000384706 RPS27P42677 84 aaKnown RBP-1.45□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms