RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 BRCA2P51587 3418 aa-3.02□□□□□ -2.89
RNU6-1040P-201ENST00000383974 NDUFC1O43677 76 aa-3.02□□□□□ -2.89
RNU6-1040P-201ENST00000383974 MRPS10P82664 201 aaKnown RBP-3.02□□□□□ -2.89
RNU6-1040P-201ENST00000383974 SPANXDQ9BXN6 97 aa-3.02□□□□□ -2.89
RNU6-1040P-201ENST00000383974 ZFYVE16Q7Z3T8 1539 aa-3.03□□□□□ -2.89
RNU6-1040P-201ENST00000383974 C20orf202A1L168 122 aa-3.03□□□□□ -2.89
RNU6-1040P-201ENST00000383974 TCEAL4Q96EI5 215 aa-3.03□□□□□ -2.89
RNU6-1040P-201ENST00000383974 AIF1LQ9BQI0 150 aa-3.03□□□□□ -2.89
RNU6-1040P-201ENST00000383974 MON2Q7Z3U7 1717 aa-3.03□□□□□ -2.89
RNU6-1040P-201ENST00000383974 FABP1P07148 127 aa-3.04□□□□□ -2.9
RNU6-1040P-201ENST00000383974 COX6CP09669 75 aa-3.04□□□□□ -2.9
RNU6-1040P-201ENST00000383974 CD163L1Q9NR16 1453 aa-3.04□□□□□ -2.9
RNU6-1040P-201ENST00000383974 ROBO1Q9Y6N7 1651 aa-3.04□□□□□ -2.9
RNU6-1040P-201ENST00000383974 TSPAN19P0C672 248 aa-3.05□□□□□ -2.9
RNU6-1040P-201ENST00000383974 KCNRGQ8N5I3 272 aa-3.05□□□□□ -2.9
RNU6-1040P-201ENST00000383974 C12orf57Q99622 126 aa-3.05□□□□□ -2.9
RNU6-1040P-201ENST00000383974 NWD1Q149M9 1564 aa-3.05□□□□□ -2.9
RNU6-1040P-201ENST00000383974 C5P01031 1676 aa-3.05□□□□□ -2.9
RNU6-1040P-201ENST00000383974 SPHKAPQ2M3C7 1700 aa-3.05□□□□□ -2.9
RNU6-1040P-201ENST00000383974 Q0VG73 95 aa-3.06□□□□□ -2.9
RNU6-1040P-201ENST00000383974 NCBP2-AS2Q69YL0 99 aa-3.06□□□□□ -2.9
RNU6-1040P-201ENST00000383974 C12orf73Q69YU5 71 aa-3.06□□□□□ -2.9
RNU6-1040P-201ENST00000383974 THOC2Q8NI27 1593 aaKnown RBP-3.06□□□□□ -2.9
RNU6-1040P-201ENST00000383974 GAFA1Q96PS6 74 aa-3.06□□□□□ -2.9
RNU6-1040P-201ENST00000383974 VAMP8Q9BV40 100 aa-3.06□□□□□ -2.9
RNU6-1040P-201ENST00000383974 MANBALQ9NQG1 85 aa-3.06□□□□□ -2.9
RNU6-1040P-201ENST00000383974 VPS13AQ96RL7 3174 aa-3.06□□□□□ -2.9
RNU6-1040P-201ENST00000383974 SPEF2Q9C093 1822 aa-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 ZC3H13Q5T200 1668 aaKnown RBP-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 CPSF1Q10570 1443 aaKnown RBP-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 J3QR89 54 aa-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 SFTA3P0C7M3 94 aa-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 GUCA1AP43080 201 aaPredicted RBP-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 Q56UQ5 140 aa-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 PRO1854Q9UHT4 67 aa-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 LRRIQ1Q96JM4 1722 aa-3.07□□□□□ -2.9
RNU6-1040P-201ENST00000383974 F6UZH7 168 aa-3.08□□□□□ -2.9
RNU6-1040P-201ENST00000383974 LSM10Q969L4 123 aaKnown RBP-3.08□□□□□ -2.9
RNU6-1040P-201ENST00000383974 KIAA0586Q9BVV6 1533 aa-3.09□□□□□ -2.9
RNU6-1040P-201ENST00000383974 ANKRD36BQ8N2N9 1353 aa-3.09□□□□□ -2.9
RNU6-1040P-201ENST00000383974 CCDC58Q4VC31 144 aa-3.09□□□□□ -2.9
RNU6-1040P-201ENST00000383974 SMIM3Q9BZL3 60 aa-3.09□□□□□ -2.9
RNU6-1040P-201ENST00000383974 SPANXA1Q9NS26 97 aa-3.09□□□□□ -2.9
RNU6-1040P-201ENST00000383974 TCHHQ07283 1943 aa-3.09□□□□□ -2.9
RNU6-1040P-201ENST00000383974 TRAV21A0A0B4J279 112 aa-3.1□□□□□ -2.91
RNU6-1040P-201ENST00000383974 BAZ1AQ9NRL2 1556 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1040P-201ENST00000383974 SCAPERQ9BY12 1400 aa-3.1□□□□□ -2.91
RNU6-1040P-201ENST00000383974 MIF4GDA9UHW6 222 aaKnown RBP-3.11□□□□□ -2.91
RNU6-1040P-201ENST00000383974 K7ERU9 68 aa-3.11□□□□□ -2.91
RNU6-1040P-201ENST00000383974 MINOS1Q5TGZ0 78 aa-3.11□□□□□ -2.91
RNU6-1040P-201ENST00000383974 ANP32BQ92688 251 aaKnown RBP-3.11□□□□□ -2.91
RNU6-1040P-201ENST00000383974 DOT1LQ8TEK3 1739 aa-3.11□□□□□ -2.91
RNU6-1040P-201ENST00000383974 TOP2BQ02880 1626 aa-3.11□□□□□ -2.91
RNU6-1040P-201ENST00000383974 RGPD1P0DJD0 1748 aa-3.12□□□□□ -2.91
RNU6-1040P-201ENST00000383974 NBEAP1P0C6P0 100 aa-3.12□□□□□ -2.91
RNU6-1040P-201ENST00000383974 GNG11P61952 73 aa-3.12□□□□□ -2.91
RNU6-1040P-201ENST00000383974 SMIM15Q7Z3B0 74 aa-3.12□□□□□ -2.91
RNU6-1040P-201ENST00000383974 IQCF6A8MYZ5 107 aa-3.13□□□□□ -2.91
RNU6-1040P-201ENST00000383974 TMEM262E9PQX1 116 aa-3.13□□□□□ -2.91
RNU6-1040P-201ENST00000383974 ZNF436-AS1Q8NC38 126 aaPredicted RBP-3.13□□□□□ -2.91
RNU6-1040P-201ENST00000383974 PPP3R2Q96LZ3 170 aa-3.13□□□□□ -2.91
RNU6-1040P-201ENST00000383974 RERGLQ9H628 205 aa-3.13□□□□□ -2.91
RNU6-1040P-201ENST00000383974 NRXN3Q9Y4C0 1643 aa-3.13□□□□□ -2.91
RNU6-1040P-201ENST00000383974 CLASP1Q7Z460 1538 aa-3.14□□□□□ -2.91
RNU6-1040P-201ENST00000383974 DEFB131BA0A096LNP1 70 aa-3.14□□□□□ -2.91
RNU6-1040P-201ENST00000383974 TMEM218A2RU14 115 aa-3.14□□□□□ -2.91
RNU6-1040P-201ENST00000383974 M0R2Z0 102 aa-3.14□□□□□ -2.91
RNU6-1040P-201ENST00000383974 CACFD1Q9UGQ2 172 aa-3.14□□□□□ -2.91
RNU6-1040P-201ENST00000383974 NEXMIFQ5QGS0 1516 aa-3.14□□□□□ -2.91
RNU6-1040P-201ENST00000383974 XIRP2A4UGR9 3374 aa-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 TRBV25-1A0A075B6N4 114 aa-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 FCER1GP30273 86 aa-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 CRIP1P50238 77 aa-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 ALKAL2Q6UX46 152 aa-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 CGREF1Q99674 301 aa-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 GSKIPQ9P0R6 139 aa-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 C6orf48Q9UBA6 75 aa-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-3.15□□□□□ -2.91
RNU6-1040P-201ENST00000383974 D6R8Y8 96 aa-3.16□□□□□ -2.92
RNU6-1040P-201ENST00000383974 MUSTN1Q8IVN3 82 aa-3.16□□□□□ -2.92
RNU6-1040P-201ENST00000383974 CCNB3Q8WWL7 1395 aa-3.16□□□□□ -2.92
RNU6-1040P-201ENST00000383974 MYH4Q9Y623 1939 aa-3.17□□□□□ -2.92
RNU6-1040P-201ENST00000383974 CRYM-AS1A6NIL9 109 aa-3.17□□□□□ -2.92
RNU6-1040P-201ENST00000383974 C8orf59Q8N0T1 100 aaPredicted RBP-3.17□□□□□ -2.92
RNU6-1040P-201ENST00000383974 C1orf54Q8WWF1 131 aa-3.17□□□□□ -2.92
RNU6-1040P-201ENST00000383974 C20orf78Q9BR46 151 aa-3.17□□□□□ -2.92
RNU6-1040P-201ENST00000383974 ITSN1Q15811 1721 aa-3.17□□□□□ -2.92
RNU6-1040P-201ENST00000383974 CFTRP13569 1480 aa-3.17□□□□□ -2.92
RNU6-1040P-201ENST00000383974 PREX2Q70Z35 1606 aa-3.19□□□□□ -2.92
RNU6-1040P-201ENST00000383974 MAP3K4Q9Y6R4 1608 aa-3.19□□□□□ -2.92
RNU6-1040P-201ENST00000383974 DDX60LQ5H9U9 1706 aaKnown RBP-3.19□□□□□ -2.92
RNU6-1040P-201ENST00000383974 A0A1B0GUT8 65 aa-3.19□□□□□ -2.92
RNU6-1040P-201ENST00000383974 HMGN3Q15651 99 aa-3.19□□□□□ -2.92
RNU6-1040P-201ENST00000383974 PMCHL1Q16048 86 aa-3.19□□□□□ -2.92
RNU6-1040P-201ENST00000383974 ACBD7Q8N6N7 88 aa-3.19□□□□□ -2.92
RNU6-1040P-201ENST00000383974 DIP2BQ9P265 1576 aa-3.2□□□□□ -2.92
RNU6-1040P-201ENST00000383974 NAP1L6A6NFF2 107 aa-3.2□□□□□ -2.92
RNU6-1040P-201ENST00000383974 CHD1O14646 1710 aa-3.2□□□□□ -2.92
RNU6-1040P-201ENST00000383974 FHAD1B1AJZ9 1412 aa-3.2□□□□□ -2.92
RNU6-1040P-201ENST00000383974 TJP1Q07157 1748 aa-3.21□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms