RNA–Protein interactions for RNA: ENST00000383773.8

NR1D2-202, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

TSL 1 (best)

Gene NR1D2, Length 3,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-202ENST00000383773 Q5VV11 94 aa11.64□□□□□ -0.55
NR1D2-202ENST00000383773 NBEAL1Q6ZS30 2694 aa11.64□□□□□ -0.55
NR1D2-202ENST00000383773 A0A087WSZ3 146 aa11.64□□□□□ -0.55
NR1D2-202ENST00000383773 SPTSSBQ8NFR3 76 aa11.64□□□□□ -0.55
NR1D2-202ENST00000383773 SRRM2Q9UQ35 2752 aaKnown RBP11.63□□□□□ -0.55
NR1D2-202ENST00000383773 A0A1B0GW54 56 aa11.63□□□□□ -0.55
NR1D2-202ENST00000383773 NDUFB1O75438 58 aa11.62□□□□□ -0.55
NR1D2-202ENST00000383773 CASC10Q5T4H9 136 aa11.62□□□□□ -0.55
NR1D2-202ENST00000383773 KRTAP7-1Q8IUC3 87 aa11.61□□□□□ -0.55
NR1D2-202ENST00000383773 PRR15LQ9BU68 103 aa11.61□□□□□ -0.55
NR1D2-202ENST00000383773 IGFL1Q6UW32 110 aa11.6□□□□□ -0.55
NR1D2-202ENST00000383773 H0Y9P7 68 aa11.58□□□□□ -0.56
NR1D2-202ENST00000383773 HUWE1Q7Z6Z7 4374 aaKnown RBP11.58□□□□□ -0.56
NR1D2-202ENST00000383773 K7EIL1 84 aa11.57□□□□□ -0.56
NR1D2-202ENST00000383773 MRPL55Q7Z7F7 128 aaKnown RBP11.57□□□□□ -0.56
NR1D2-202ENST00000383773 SPRR1AP35321 89 aa11.57□□□□□ -0.56
NR1D2-202ENST00000383773 PRLHP81277 87 aa11.57□□□□□ -0.56
NR1D2-202ENST00000383773 MDFIQ99750 246 aa11.55□□□□□ -0.56
NR1D2-202ENST00000383773 Q8N9P0 234 aaPredicted RBP11.55□□□□□ -0.56
NR1D2-202ENST00000383773 H3BNG1 76 aa11.54□□□□□ -0.56
NR1D2-202ENST00000383773 C11orf45Q8TAV5 145 aa11.54□□□□□ -0.56
NR1D2-202ENST00000383773 C16orf90A8MZG2 172 aa11.54□□□□□ -0.56
NR1D2-202ENST00000383773 MGAM2Q2M2H8 2515 aa11.53□□□□□ -0.56
NR1D2-202ENST00000383773 LINC01556Q5JQF7 62 aa11.53□□□□□ -0.56
NR1D2-202ENST00000383773 CASC2Q6XLA1 102 aa11.52□□□□□ -0.56
NR1D2-202ENST00000383773 REG3GQ6UW15 175 aa11.51□□□□□ -0.57
NR1D2-202ENST00000383773 UBE2AP49459 152 aa11.51□□□□□ -0.57
NR1D2-202ENST00000383773 DEFB131BA0A096LNP1 70 aa11.51□□□□□ -0.57
NR1D2-202ENST00000383773 A0A096LNI7 61 aa11.49□□□□□ -0.57
NR1D2-202ENST00000383773 A6NED7 52 aa11.49□□□□□ -0.57
NR1D2-202ENST00000383773 IGKV2-24A0A0C4DH68 120 aa11.48□□□□□ -0.57
NR1D2-202ENST00000383773 PLA2G2DQ9UNK4 145 aa11.48□□□□□ -0.57
NR1D2-202ENST00000383773 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
NR1D2-202ENST00000383773 KRTAP29-1A8MX34 341 aaPredicted RBP11.46□□□□□ -0.57
NR1D2-202ENST00000383773 CD164Q04900 197 aa11.46□□□□□ -0.57
NR1D2-202ENST00000383773 LIMD2Q9BT23 127 aa11.46□□□□□ -0.57
NR1D2-202ENST00000383773 LCA10Q71F78 164 aa11.45□□□□□ -0.58
NR1D2-202ENST00000383773 IGLV5-37A0A075B6J1 123 aa11.44□□□□□ -0.58
NR1D2-202ENST00000383773 CNBPP62633 177 aaKnown RBP11.44□□□□□ -0.58
NR1D2-202ENST00000383773 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
NR1D2-202ENST00000383773 LINC00588Q9Y4M8 146 aa11.44□□□□□ -0.58
NR1D2-202ENST00000383773 COA5Q86WW8 74 aa11.42□□□□□ -0.58
NR1D2-202ENST00000383773 DNAH9Q9NYC9 4486 aa11.42□□□□□ -0.58
NR1D2-202ENST00000383773 H0Y9J4 135 aa11.42□□□□□ -0.58
NR1D2-202ENST00000383773 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
NR1D2-202ENST00000383773 COL7A1Q02388 2944 aa11.4□□□□□ -0.58
NR1D2-202ENST00000383773 CSMD3Q7Z407 3707 aa11.4□□□□□ -0.58
NR1D2-202ENST00000383773 KTN1-AS1Q86SY8 53 aa11.4□□□□□ -0.58
NR1D2-202ENST00000383773 RBM12B-AS1Q9P1G2 102 aa11.38□□□□□ -0.59
NR1D2-202ENST00000383773 DNAH10OSP0CZ25 163 aa11.37□□□□□ -0.59
NR1D2-202ENST00000383773 SPAG11AQ6PDA7 123 aa11.37□□□□□ -0.59
NR1D2-202ENST00000383773 C9orf163Q8N9P6 203 aa11.37□□□□□ -0.59
NR1D2-202ENST00000383773 A8MWP4 228 aa11.34□□□□□ -0.59
NR1D2-202ENST00000383773 Q75L30 129 aa11.33□□□□□ -0.6
NR1D2-202ENST00000383773 DNAH1Q9P2D7 4330 aa11.32□□□□□ -0.6
NR1D2-202ENST00000383773 H3BPC8 53 aa11.32□□□□□ -0.6
NR1D2-202ENST00000383773 ATP11AUNQ6ZP68 121 aa11.31□□□□□ -0.6
NR1D2-202ENST00000383773 STAB2Q8WWQ8 2551 aa11.3□□□□□ -0.6
NR1D2-202ENST00000383773 LYSTQ99698 3801 aa11.3□□□□□ -0.6
NR1D2-202ENST00000383773 LINC00472Q9H8W2 130 aa11.29□□□□□ -0.6
NR1D2-202ENST00000383773 KRTAP11-1Q8IUC1 163 aa11.29□□□□□ -0.6
NR1D2-202ENST00000383773 IGLV8-61A0A075B6I0 122 aa11.28□□□□□ -0.6
NR1D2-202ENST00000383773 LOC101927531A0A1B0GV80 90 aa11.27□□□□□ -0.6
NR1D2-202ENST00000383773 CHTF8P0CG12 524 aa11.27□□□□□ -0.61
NR1D2-202ENST00000383773 MMP24-AS1A0A0U1RRL7 71 aa11.26□□□□□ -0.61
NR1D2-202ENST00000383773 DNHD1Q96M86 4753 aa11.26□□□□□ -0.61
NR1D2-202ENST00000383773 IGLV7-46A0A075B6I9 117 aa11.26□□□□□ -0.61
NR1D2-202ENST00000383773 A6NN06 94 aa11.26□□□□□ -0.61
NR1D2-202ENST00000383773 PHF5AQ7RTV0 110 aaKnown RBP11.26□□□□□ -0.61
NR1D2-202ENST00000383773 TENM2Q9NT68 2774 aa11.26□□□□□ -0.61
NR1D2-202ENST00000383773 NDUFS5O43920 106 aa11.25□□□□□ -0.61
NR1D2-202ENST00000383773 DYNC2H1Q8NCM8 4307 aaKnown RBP11.24□□□□□ -0.61
NR1D2-202ENST00000383773 DNAH10Q8IVF4 4471 aa11.24□□□□□ -0.61
NR1D2-202ENST00000383773 CDC42SE1Q9NRR8 79 aa11.23□□□□□ -0.61
NR1D2-202ENST00000383773 SPINK7P58062 85 aa11.22□□□□□ -0.61
NR1D2-202ENST00000383773 MOBPQ13875 183 aa11.22□□□□□ -0.61
NR1D2-202ENST00000383773 PRKDCP78527 4128 aaKnown RBP11.21□□□□□ -0.62
NR1D2-202ENST00000383773 IGLV9-49A0A0B4J1Y8 123 aa11.17□□□□□ -0.62
NR1D2-202ENST00000383773 DNAH7Q8WXX0 4024 aa11.16□□□□□ -0.62
NR1D2-202ENST00000383773 PLECQ15149 4684 aaKnown RBP11.16□□□□□ -0.62
NR1D2-202ENST00000383773 LINC01558Q9Y6Z2 57 aa11.15□□□□□ -0.63
NR1D2-202ENST00000383773 IGHV6-1A0A0B4J1U7 121 aa11.14□□□□□ -0.63
NR1D2-202ENST00000383773 HRES1P13985 223 aa11.14□□□□□ -0.63
NR1D2-202ENST00000383773 APLNQ9ULZ1 77 aa11.14□□□□□ -0.63
NR1D2-202ENST00000383773 C7orf65Q6ZTY9 151 aa11.13□□□□□ -0.63
NR1D2-202ENST00000383773 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
NR1D2-202ENST00000383773 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
NR1D2-202ENST00000383773 PRR26Q8N8Z3 221 aa11.09□□□□□ -0.63
NR1D2-202ENST00000383773 C8orf17Q9NRJ1 99 aa11.08□□□□□ -0.64
NR1D2-202ENST00000383773 STARD9Q9P2P6 4700 aa11.08□□□□□ -0.64
NR1D2-202ENST00000383773 SPRR1BP22528 89 aa11.07□□□□□ -0.64
NR1D2-202ENST00000383773 PLAC8Q9NZF1 115 aa11.07□□□□□ -0.64
NR1D2-202ENST00000383773 UBE2DNLQ8IWF7 75 aa11.06□□□□□ -0.64
NR1D2-202ENST00000383773 Q96NJ1 140 aa11.06□□□□□ -0.64
NR1D2-202ENST00000383773 PRAC1Q96KF2 57 aa11.05□□□□□ -0.64
NR1D2-202ENST00000383773 TP53AIP1Q9HCN2 124 aa11.05□□□□□ -0.64
NR1D2-202ENST00000383773 A0A087X002 238 aa11.03□□□□□ -0.64
NR1D2-202ENST00000383773 NOTCH2NLQ7Z3S9 236 aa11.03□□□□□ -0.64
NR1D2-202ENST00000383773 NUPR2A6NF83 97 aa11.01□□□□□ -0.65
NR1D2-202ENST00000383773 Q6ZR54 194 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms