RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 KRTAP10-1P60331 282 aa13.17□□□□□ -0.3
GMDS-202ENST00000380815 CIRBP-AS1Q8TBR5 109 aa13.17□□□□□ -0.3
GMDS-202ENST00000380815 PKD1P98161 4303 aa13.16□□□□□ -0.3
GMDS-202ENST00000380815 SACSQ9NZJ4 4579 aa13.15□□□□□ -0.3
GMDS-202ENST00000380815 IGLV8-61A0A075B6I0 122 aa13.14□□□□□ -0.31
GMDS-202ENST00000380815 LINC00336Q6ZUF6 198 aa13.14□□□□□ -0.31
GMDS-202ENST00000380815 DNAH8Q96JB1 4490 aa13.13□□□□□ -0.31
GMDS-202ENST00000380815 A0A1B0GW54 56 aa13.12□□□□□ -0.31
GMDS-202ENST00000380815 ATP5EP2Q5VTU8 51 aa13.12□□□□□ -0.31
GMDS-202ENST00000380815 SRRM2Q9UQ35 2752 aaKnown RBP13.12□□□□□ -0.31
GMDS-202ENST00000380815 SCXQ7RTU7 201 aa13.12□□□□□ -0.31
GMDS-202ENST00000380815 ZNF861PO60384 105 aa13.11□□□□□ -0.31
GMDS-202ENST00000380815 Q6ZVQ6 151 aa13.11□□□□□ -0.31
GMDS-202ENST00000380815 A0A1W2PNM2 257 aa13.1□□□□□ -0.31
GMDS-202ENST00000380815 IGKV3D-7A0A0C4DH55 119 aa13.09□□□□□ -0.31
GMDS-202ENST00000380815 Q8NBF4 154 aa13.09□□□□□ -0.31
GMDS-202ENST00000380815 SPRR4Q96PI1 79 aa13.07□□□□□ -0.32
GMDS-202ENST00000380815 ZNF706Q9Y5V0 76 aaPredicted RBP13.07□□□□□ -0.32
GMDS-202ENST00000380815 IGLV7-43P04211 117 aa13.06□□□□□ -0.32
GMDS-202ENST00000380815 IGFL1Q6UW32 110 aa13.06□□□□□ -0.32
GMDS-202ENST00000380815 LINC00483Q53H64 154 aa13.05□□□□□ -0.32
GMDS-202ENST00000380815 CRYGAP11844 174 aa13.02□□□□□ -0.32
GMDS-202ENST00000380815 HAMPP81172 84 aa13.02□□□□□ -0.33
GMDS-202ENST00000380815 CXCL6P80162 114 aa13□□□□□ -0.33
GMDS-202ENST00000380815 NREPQ16612 68 aa13□□□□□ -0.33
GMDS-202ENST00000380815 A0A0G2JQZ4 141 aa12.99□□□□□ -0.33
GMDS-202ENST00000380815 A0A1B0GVY2 172 aa12.97□□□□□ -0.33
GMDS-202ENST00000380815 ANAPC13Q9BS18 74 aa12.96□□□□□ -0.34
GMDS-202ENST00000380815 FAM236AA0A1B0GUQ0 79 aa12.95□□□□□ -0.34
GMDS-202ENST00000380815 FAM236BA0A1B0GV22 79 aa12.95□□□□□ -0.34
GMDS-202ENST00000380815 HIST1H4AP62805 103 aaKnown RBP12.95□□□□□ -0.34
GMDS-202ENST00000380815 RPL37AP61513 92 aaKnown RBP12.92□□□□□ -0.34
GMDS-202ENST00000380815 A0A087WVE0 104 aa12.92□□□□□ -0.34
GMDS-202ENST00000380815 IGLV9-49A0A0B4J1Y8 123 aa12.91□□□□□ -0.34
GMDS-202ENST00000380815 RYR2Q92736 4967 aa12.9□□□□□ -0.34
GMDS-202ENST00000380815 C9orf153Q5TBE3 101 aa12.89□□□□□ -0.35
GMDS-202ENST00000380815 BPY2O14599 106 aa12.88□□□□□ -0.35
GMDS-202ENST00000380815 PKHD1P08F94 4074 aa12.87□□□□□ -0.35
GMDS-202ENST00000380815 A0A087WSZ3 146 aa12.87□□□□□ -0.35
GMDS-202ENST00000380815 LRP1BQ9NZR2 4599 aa12.87□□□□□ -0.35
GMDS-202ENST00000380815 ANAPC11Q9NYG5 84 aa12.86□□□□□ -0.35
GMDS-202ENST00000380815 KMT2CQ8NEZ4 4911 aaKnown RBP12.86□□□□□ -0.35
GMDS-202ENST00000380815 MOBPQ13875 183 aa12.82□□□□□ -0.36
GMDS-202ENST00000380815 ATOX1O00244 68 aa12.79□□□□□ -0.36
GMDS-202ENST00000380815 IGKV4-1P06312 121 aa12.76□□□□□ -0.37
GMDS-202ENST00000380815 Q8N9L7 120 aa12.76□□□□□ -0.37
GMDS-202ENST00000380815 DSCR10P59022 87 aa12.74□□□□□ -0.37
GMDS-202ENST00000380815 DYNC1H1Q14204 4646 aaKnown RBP12.74□□□□□ -0.37
GMDS-202ENST00000380815 VPS13BQ7Z7G8 4022 aa12.73□□□□□ -0.37
GMDS-202ENST00000380815 FAM229BQ4G0N7 80 aa12.72□□□□□ -0.37
GMDS-202ENST00000380815 SSBP3-AS1Q7Z2R9 100 aa12.71□□□□□ -0.37
GMDS-202ENST00000380815 LINC00472Q9H8W2 130 aa12.71□□□□□ -0.38
GMDS-202ENST00000380815 HRCT1Q6UXD1 115 aa12.69□□□□□ -0.38
GMDS-202ENST00000380815 KRTAP1-4P0C5Y4 121 aa12.68□□□□□ -0.38
GMDS-202ENST00000380815 DEFB116Q30KQ4 102 aa12.68□□□□□ -0.38
GMDS-202ENST00000380815 SS18L2Q9UHA2 77 aa12.68□□□□□ -0.38
GMDS-202ENST00000380815 A0A087X002 238 aa12.66□□□□□ -0.38
GMDS-202ENST00000380815 K7EQZ3 153 aa12.66□□□□□ -0.38
GMDS-202ENST00000380815 SMR3BP02814 79 aaPredicted RBP12.66□□□□□ -0.38
GMDS-202ENST00000380815 CD164Q04900 197 aa12.66□□□□□ -0.38
GMDS-202ENST00000380815 SPINK6Q6UWN8 80 aa12.66□□□□□ -0.38
GMDS-202ENST00000380815 CCDC179H3BU77 68 aa12.64□□□□□ -0.39
GMDS-202ENST00000380815 KRTAP13-2Q52LG2 175 aa12.64□□□□□ -0.39
GMDS-202ENST00000380815 SERP2Q8N6R1 65 aa12.64□□□□□ -0.39
GMDS-202ENST00000380815 J3KT08 172 aa12.62□□□□□ -0.39
GMDS-202ENST00000380815 UQCRQO14949 82 aa12.61□□□□□ -0.39
GMDS-202ENST00000380815 COX7CP15954 63 aa12.61□□□□□ -0.39
GMDS-202ENST00000380815 Q96NJ1 140 aa12.61□□□□□ -0.39
GMDS-202ENST00000380815 APOBP04114 4563 aaKnown RBP12.6□□□□□ -0.39
GMDS-202ENST00000380815 SMIM20Q8N5G0 67 aa12.6□□□□□ -0.39
GMDS-202ENST00000380815 A8MWP4 228 aa12.58□□□□□ -0.39
GMDS-202ENST00000380815 PLA2G1BP04054 148 aaKnown RBP12.58□□□□□ -0.4
GMDS-202ENST00000380815 KRTAP10-4P60372 401 aaPredicted RBP12.56□□□□□ -0.4
GMDS-202ENST00000380815 PRR15Q8IV56 129 aa12.56□□□□□ -0.4
GMDS-202ENST00000380815 TRAV7A0A075B6U4 112 aa12.54□□□□□ -0.4
GMDS-202ENST00000380815 HCG22E2RYF7 251 aa12.53□□□□□ -0.4
GMDS-202ENST00000380815 RYR3Q15413 4870 aa12.53□□□□□ -0.4
GMDS-202ENST00000380815 NDUFB1O75438 58 aa12.51□□□□□ -0.41
GMDS-202ENST00000380815 ASB16-AS1Q495Z4 193 aa12.49□□□□□ -0.41
GMDS-202ENST00000380815 Q5XG85 94 aa12.47□□□□□ -0.41
GMDS-202ENST00000380815 TYMSOSQ8TAI1 123 aa12.47□□□□□ -0.41
GMDS-202ENST00000380815 OCR1Q9BZK8 76 aa12.47□□□□□ -0.41
GMDS-202ENST00000380815 FAT1Q14517 4588 aa12.44□□□□□ -0.42
GMDS-202ENST00000380815 CDK2AP2O75956 126 aa12.44□□□□□ -0.42
GMDS-202ENST00000380815 KRTAP29-1A8MX34 341 aaPredicted RBP12.43□□□□□ -0.42
GMDS-202ENST00000380815 WFDC13Q8IUB5 93 aa12.43□□□□□ -0.42
GMDS-202ENST00000380815 PRR26Q8N8Z3 221 aa12.41□□□□□ -0.42
GMDS-202ENST00000380815 CASC2Q6XLA1 102 aa12.41□□□□□ -0.42
GMDS-202ENST00000380815 A0A1B0GVX0 72 aa12.4□□□□□ -0.42
GMDS-202ENST00000380815 FAM229AH3BQW9 127 aa12.4□□□□□ -0.42
GMDS-202ENST00000380815 C4orf48Q5BLP8 95 aa12.4□□□□□ -0.42
GMDS-202ENST00000380815 MMP24-AS1A0A0U1RRL7 71 aa12.39□□□□□ -0.43
GMDS-202ENST00000380815 LIMD2Q9BT23 127 aa12.38□□□□□ -0.43
GMDS-202ENST00000380815 SPINK1P00995 79 aa12.37□□□□□ -0.43
GMDS-202ENST00000380815 IGHV6-1A0A0B4J1U7 121 aa12.35□□□□□ -0.43
GMDS-202ENST00000380815 C20orf197Q8N268 126 aa12.35□□□□□ -0.43
GMDS-202ENST00000380815 C8orf17Q9NRJ1 99 aa12.34□□□□□ -0.43
GMDS-202ENST00000380815 hDV103S1A0JD37 113 aa12.33□□□□□ -0.44
GMDS-202ENST00000380815 C1orf195Q5TG92 126 aa12.33□□□□□ -0.44
GMDS-202ENST00000380815 LINC00304Q8N9R0 145 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms