RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 SMIM29Q86T20 159 aa11.05□□□□□ -0.64
SMN2-202ENST00000380742 J3QL48 77 aa11.04□□□□□ -0.64
SMN2-202ENST00000380742 TCL1BO95988 128 aa11.04□□□□□ -0.64
SMN2-202ENST00000380742 TYMSOSQ8TAI1 123 aa11.04□□□□□ -0.64
SMN2-202ENST00000380742 IGLV9-49A0A0B4J1Y8 123 aa11.03□□□□□ -0.64
SMN2-202ENST00000380742 TRACP01848 142 aa11.03□□□□□ -0.64
SMN2-202ENST00000380742 A0A1W2PPM0 123 aa11.02□□□□□ -0.65
SMN2-202ENST00000380742 DNAL4O96015 105 aa11.02□□□□□ -0.65
SMN2-202ENST00000380742 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.65
SMN2-202ENST00000380742 LAMTOR3Q9UHA4 124 aa11.02□□□□□ -0.65
SMN2-202ENST00000380742 MOBPQ13875 183 aa11.01□□□□□ -0.65
SMN2-202ENST00000380742 LYRM7Q5U5X0 104 aa11.01□□□□□ -0.65
SMN2-202ENST00000380742 ATXN8Q156A1 80 aa11□□□□□ -0.65
SMN2-202ENST00000380742 PPDPFLQ8WWR9 84 aa11□□□□□ -0.65
SMN2-202ENST00000380742 C9orf153Q5TBE3 101 aa10.98□□□□□ -0.65
SMN2-202ENST00000380742 ORMDL1Q9P0S3 153 aa10.98□□□□□ -0.65
SMN2-202ENST00000380742 TRBV20-1A0A075B6N2 111 aa10.97□□□□□ -0.65
SMN2-202ENST00000380742 FABP2P12104 132 aa10.97□□□□□ -0.65
SMN2-202ENST00000380742 SSBP3-AS1Q7Z2R9 100 aa10.95□□□□□ -0.66
SMN2-202ENST00000380742 Q8NBF4 154 aa10.95□□□□□ -0.66
SMN2-202ENST00000380742 GHRHP01286 108 aa10.94□□□□□ -0.66
SMN2-202ENST00000380742 DMBT1Q9UGM3 2413 aaPredicted RBP10.93□□□□□ -0.66
SMN2-202ENST00000380742 NDUFV3P56181 108 aaKnown RBP10.91□□□□□ -0.66
SMN2-202ENST00000380742 LINC00304Q8N9R0 145 aa10.91□□□□□ -0.66
SMN2-202ENST00000380742 F8WEM9 126 aa10.9□□□□□ -0.66
SMN2-202ENST00000380742 H3BQ85 93 aa10.9□□□□□ -0.66
SMN2-202ENST00000380742 TMEM256-PLSCR3K7ERE1 68 aa10.9□□□□□ -0.66
SMN2-202ENST00000380742 SPCS1Q9Y6A9 102 aa10.9□□□□□ -0.66
SMN2-202ENST00000380742 BAALC-AS2P0C853 105 aa10.9□□□□□ -0.67
SMN2-202ENST00000380742 IGLV8-61A0A075B6I0 122 aa10.89□□□□□ -0.67
SMN2-202ENST00000380742 A0A0G2JQZ4 141 aa10.89□□□□□ -0.67
SMN2-202ENST00000380742 H3BMG7 143 aa10.89□□□□□ -0.67
SMN2-202ENST00000380742 C9JAW5 83 aa10.88□□□□□ -0.67
SMN2-202ENST00000380742 HERC1Q15751 4861 aa10.88□□□□□ -0.67
SMN2-202ENST00000380742 UBE2V1Q13404 147 aa10.87□□□□□ -0.67
SMN2-202ENST00000380742 C4orf48Q5BLP8 95 aa10.84□□□□□ -0.67
SMN2-202ENST00000380742 SPAG11AQ6PDA7 123 aa10.84□□□□□ -0.67
SMN2-202ENST00000380742 IGFL1Q6UW32 110 aa10.84□□□□□ -0.67
SMN2-202ENST00000380742 K7EP34 96 aa10.83□□□□□ -0.68
SMN2-202ENST00000380742 Q6JHZ5 121 aa10.83□□□□□ -0.68
SMN2-202ENST00000380742 MTURNQ8N3F0 131 aa10.83□□□□□ -0.68
SMN2-202ENST00000380742 ANKRD29Q8N6D5 301 aa10.83□□□□□ -0.68
SMN2-202ENST00000380742 A0A1B0GV72 72 aa10.82□□□□□ -0.68
SMN2-202ENST00000380742 HRCT1Q6UXD1 115 aa10.81□□□□□ -0.68
SMN2-202ENST00000380742 SPINK1P00995 79 aa10.8□□□□□ -0.68
SMN2-202ENST00000380742 H3BT86 120 aa10.78□□□□□ -0.68
SMN2-202ENST00000380742 CD164Q04900 197 aa10.78□□□□□ -0.68
SMN2-202ENST00000380742 GTF2H5Q6ZYL4 71 aa10.77□□□□□ -0.69
SMN2-202ENST00000380742 SMCPP49901 116 aaPredicted RBP10.75□□□□□ -0.69
SMN2-202ENST00000380742 RPS29P62273 56 aaKnown RBP10.75□□□□□ -0.69
SMN2-202ENST00000380742 PRO0461Q9UI25 63 aa10.75□□□□□ -0.69
SMN2-202ENST00000380742 RBM3P98179 157 aaKnown RBP10.74□□□□□ -0.69
SMN2-202ENST00000380742 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
SMN2-202ENST00000380742 A0A1W2PNM2 257 aa10.71□□□□□ -0.69
SMN2-202ENST00000380742 JMJD7-PLA2G4BH0Y9G9 81 aa10.71□□□□□ -0.69
SMN2-202ENST00000380742 OBSCN-AS1Q96MR7 158 aa10.71□□□□□ -0.69
SMN2-202ENST00000380742 TRBV7-7A0A0K0K1E9 115 aa10.69□□□□□ -0.7
SMN2-202ENST00000380742 Q6Q795 121 aa10.69□□□□□ -0.7
SMN2-202ENST00000380742 TEN1Q86WV5 123 aa10.69□□□□□ -0.7
SMN2-202ENST00000380742 DSCR8Q96T75 97 aa10.69□□□□□ -0.7
SMN2-202ENST00000380742 RETNLBQ9BQ08 111 aa10.69□□□□□ -0.7
SMN2-202ENST00000380742 A0A1B0GV90 55 aa10.68□□□□□ -0.7
SMN2-202ENST00000380742 LIMD2Q9BT23 127 aa10.67□□□□□ -0.7
SMN2-202ENST00000380742 CCKP06307 115 aa10.65□□□□□ -0.7
SMN2-202ENST00000380742 Q5XG85 94 aa10.65□□□□□ -0.7
SMN2-202ENST00000380742 C14orf132Q9NPU4 83 aa10.65□□□□□ -0.7
SMN2-202ENST00000380742 HMCN2Q8NDA2 5059 aa10.65□□□□□ -0.7
SMN2-202ENST00000380742 F8W1H4 67 aa10.64□□□□□ -0.71
SMN2-202ENST00000380742 Q6ZQT0 140 aa10.64□□□□□ -0.71
SMN2-202ENST00000380742 LOC110117498A0A087WWA1 95 aa10.63□□□□□ -0.71
SMN2-202ENST00000380742 VPS25Q9BRG1 176 aa10.62□□□□□ -0.71
SMN2-202ENST00000380742 A0A087WSZ3 146 aa10.61□□□□□ -0.71
SMN2-202ENST00000380742 PRR4Q16378 134 aa10.6□□□□□ -0.71
SMN2-202ENST00000380742 PDE6GP18545 87 aa10.59□□□□□ -0.71
SMN2-202ENST00000380742 ASB16-AS1Q495Z4 193 aa10.58□□□□□ -0.72
SMN2-202ENST00000380742 C1orf195Q5TG92 126 aa10.57□□□□□ -0.72
SMN2-202ENST00000380742 SS18L2Q9UHA2 77 aa10.55□□□□□ -0.72
SMN2-202ENST00000380742 ETDBQ3ZM63 59 aa10.54□□□□□ -0.72
SMN2-202ENST00000380742 FP248Q71RG6 208 aaPredicted RBP10.54□□□□□ -0.72
SMN2-202ENST00000380742 LPAP08519 4548 aa10.53□□□□□ -0.72
SMN2-202ENST00000380742 IGLV7-46A0A075B6I9 117 aa10.52□□□□□ -0.72
SMN2-202ENST00000380742 C21orf62-AS1Q17RA5 79 aa10.5□□□□□ -0.73
SMN2-202ENST00000380742 Q96NJ1 140 aa10.5□□□□□ -0.73
SMN2-202ENST00000380742 A0A1B0GW54 56 aa10.49□□□□□ -0.73
SMN2-202ENST00000380742 LOC100996750A0A140TA64 210 aa10.48□□□□□ -0.73
SMN2-202ENST00000380742 KRTAP4-6Q9BYQ5 205 aa10.48□□□□□ -0.73
SMN2-202ENST00000380742 LINC00472Q9H8W2 130 aa10.44□□□□□ -0.74
SMN2-202ENST00000380742 LRP2P98164 4655 aa10.42□□□□□ -0.74
SMN2-202ENST00000380742 TPRXLQ17RH7 258 aa10.42□□□□□ -0.74
SMN2-202ENST00000380742 DEFB116Q30KQ4 102 aa10.41□□□□□ -0.74
SMN2-202ENST00000380742 KRTAP13-3Q3SY46 172 aa10.41□□□□□ -0.74
SMN2-202ENST00000380742 IGKV4-1P06312 121 aa10.38□□□□□ -0.75
SMN2-202ENST00000380742 NREPQ16612 68 aa10.36□□□□□ -0.75
SMN2-202ENST00000380742 SIGMAR1Q99720 223 aa10.35□□□□□ -0.75
SMN2-202ENST00000380742 C9orf92A6NGG3 77 aa10.34□□□□□ -0.75
SMN2-202ENST00000380742 LINC00846Q9NV44 126 aa10.34□□□□□ -0.75
SMN2-202ENST00000380742 CDIP1Q9H305 208 aa10.32□□□□□ -0.76
SMN2-202ENST00000380742 Q6ZVQ6 151 aa10.31□□□□□ -0.76
SMN2-202ENST00000380742 J3KT08 172 aa10.3□□□□□ -0.76
SMN2-202ENST00000380742 XP32Q5T750 250 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms