RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 DPH3Q96FX2 82 aa14.41□□□□□ -0.1
VPS16-201ENST00000380443 UBE2AP49459 152 aa14.38□□□□□ -0.11
VPS16-201ENST00000380443 KRTAP11-1Q8IUC1 163 aa14.38□□□□□ -0.11
VPS16-201ENST00000380443 C1orf134Q5TEV5 83 aa14.38□□□□□ -0.11
VPS16-201ENST00000380443 SMIM20Q8N5G0 67 aa14.38□□□□□ -0.11
VPS16-201ENST00000380443 C9orf153Q5TBE3 101 aa14.37□□□□□ -0.11
VPS16-201ENST00000380443 RTL8CO15255 209 aa14.36□□□□□ -0.11
VPS16-201ENST00000380443 PANO1I0J062 215 aa14.35□□□□□ -0.11
VPS16-201ENST00000380443 CRYGAP11844 174 aa14.35□□□□□ -0.11
VPS16-201ENST00000380443 ALMS1Q8TCU4 4167 aa14.35□□□□□ -0.11
VPS16-201ENST00000380443 BPY2O14599 106 aa14.34□□□□□ -0.11
VPS16-201ENST00000380443 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.34□□□□□ -0.11
VPS16-201ENST00000380443 SACSQ9NZJ4 4579 aa14.32□□□□□ -0.12
VPS16-201ENST00000380443 KRTAP13-1Q8IUC0 172 aa14.31□□□□□ -0.12
VPS16-201ENST00000380443 IGFL1Q6UW32 110 aa14.29□□□□□ -0.12
VPS16-201ENST00000380443 SCXQ7RTU7 201 aa14.29□□□□□ -0.12
VPS16-201ENST00000380443 PLAC8Q9NZF1 115 aa14.27□□□□□ -0.12
VPS16-201ENST00000380443 TRAV7A0A075B6U4 112 aa14.27□□□□□ -0.13
VPS16-201ENST00000380443 IGLV5-52A0A0A0MRZ9 124 aa14.26□□□□□ -0.13
VPS16-201ENST00000380443 IGKV4-1P06312 121 aa14.25□□□□□ -0.13
VPS16-201ENST00000380443 RYR3Q15413 4870 aa14.24□□□□□ -0.13
VPS16-201ENST00000380443 RYR2Q92736 4967 aa14.24□□□□□ -0.13
VPS16-201ENST00000380443 DNAH6Q9C0G6 4158 aa14.23□□□□□ -0.13
VPS16-201ENST00000380443 HYDINQ4G0P3 5121 aa14.21□□□□□ -0.13
VPS16-201ENST00000380443 KMT2AQ03164 3969 aa14.18□□□□□ -0.14
VPS16-201ENST00000380443 DNAH17Q9UFH2 4485 aa14.18□□□□□ -0.14
VPS16-201ENST00000380443 ZNF706Q9Y5V0 76 aaPredicted RBP14.18□□□□□ -0.14
VPS16-201ENST00000380443 RPL37AP61513 92 aaKnown RBP14.14□□□□□ -0.15
VPS16-201ENST00000380443 Q8N9L7 120 aa14.14□□□□□ -0.15
VPS16-201ENST00000380443 DNAH2Q9P225 4427 aa14.14□□□□□ -0.15
VPS16-201ENST00000380443 LINC00483Q53H64 154 aa14.13□□□□□ -0.15
VPS16-201ENST00000380443 HECTD4Q9Y4D8 3996 aa14.13□□□□□ -0.15
VPS16-201ENST00000380443 PSORS1C2Q9UIG4 136 aa14.13□□□□□ -0.15
VPS16-201ENST00000380443 DSCR10P59022 87 aa14.11□□□□□ -0.15
VPS16-201ENST00000380443 A0A087WSZ3 146 aa14.1□□□□□ -0.15
VPS16-201ENST00000380443 ZNF861PO60384 105 aa14.09□□□□□ -0.15
VPS16-201ENST00000380443 A0A0G2JQZ4 141 aa14.08□□□□□ -0.16
VPS16-201ENST00000380443 TMEM258P61165 79 aa14.07□□□□□ -0.16
VPS16-201ENST00000380443 C20orf197Q8N268 126 aa14.04□□□□□ -0.16
VPS16-201ENST00000380443 KLKP1Q107X0 134 aa14.03□□□□□ -0.16
VPS16-201ENST00000380443 OCR1Q9BZK8 76 aa14.01□□□□□ -0.17
VPS16-201ENST00000380443 K7EQZ3 153 aa14□□□□□ -0.17
VPS16-201ENST00000380443 LINC00336Q6ZUF6 198 aa13.99□□□□□ -0.17
VPS16-201ENST00000380443 CYSTM1Q9H1C7 97 aa13.99□□□□□ -0.17
VPS16-201ENST00000380443 J3KT08 172 aa13.97□□□□□ -0.17
VPS16-201ENST00000380443 IGLV7-43P04211 117 aa13.97□□□□□ -0.17
VPS16-201ENST00000380443 LINC00472Q9H8W2 130 aa13.96□□□□□ -0.17
VPS16-201ENST00000380443 HCG22E2RYF7 251 aa13.95□□□□□ -0.18
VPS16-201ENST00000380443 NDUFC1O43677 76 aa13.95□□□□□ -0.18
VPS16-201ENST00000380443 IGLV9-49A0A0B4J1Y8 123 aa13.94□□□□□ -0.18
VPS16-201ENST00000380443 KRTAP10-2P60368 255 aa13.94□□□□□ -0.18
VPS16-201ENST00000380443 RPS28P62857 69 aaKnown RBP13.92□□□□□ -0.18
VPS16-201ENST00000380443 Q6ZSA8 131 aa13.92□□□□□ -0.18
VPS16-201ENST00000380443 CIRBP-AS1Q8TBR5 109 aa13.9□□□□□ -0.18
VPS16-201ENST00000380443 FRAS1Q86XX4 4008 aa13.9□□□□□ -0.18
VPS16-201ENST00000380443 A8MWP4 228 aa13.9□□□□□ -0.18
VPS16-201ENST00000380443 TMEM254Q8TBM7 123 aa13.9□□□□□ -0.18
VPS16-201ENST00000380443 DEFB116Q30KQ4 102 aa13.88□□□□□ -0.19
VPS16-201ENST00000380443 PRR15Q8IV56 129 aa13.88□□□□□ -0.19
VPS16-201ENST00000380443 H7BZZ5 65 aa13.87□□□□□ -0.19
VPS16-201ENST00000380443 FAM30AQ9NZY2 134 aa13.87□□□□□ -0.19
VPS16-201ENST00000380443 C5orf47Q569G3 176 aa13.86□□□□□ -0.19
VPS16-201ENST00000380443 DNAH8Q96JB1 4490 aa13.86□□□□□ -0.19
VPS16-201ENST00000380443 MOBPQ13875 183 aa13.85□□□□□ -0.19
VPS16-201ENST00000380443 SNURFQ9Y675 71 aa13.84□□□□□ -0.19
VPS16-201ENST00000380443 SRRM2Q9UQ35 2752 aaKnown RBP13.84□□□□□ -0.19
VPS16-201ENST00000380443 A0A0U1RQV1 116 aa13.83□□□□□ -0.2
VPS16-201ENST00000380443 NDUFB1O75438 58 aa13.82□□□□□ -0.2
VPS16-201ENST00000380443 DNAH11Q96DT5 4516 aa13.81□□□□□ -0.2
VPS16-201ENST00000380443 KRTAP10-1P60331 282 aa13.8□□□□□ -0.2
VPS16-201ENST00000380443 KRTAP29-1A8MX34 341 aaPredicted RBP13.79□□□□□ -0.2
VPS16-201ENST00000380443 FAM236DA0A1B0GTK5 79 aa13.78□□□□□ -0.2
VPS16-201ENST00000380443 FAM236CP0DP71 79 aa13.78□□□□□ -0.2
VPS16-201ENST00000380443 FAT2Q9NYQ8 4349 aa13.78□□□□□ -0.2
VPS16-201ENST00000380443 SSBP3-AS1Q7Z2R9 100 aa13.78□□□□□ -0.2
VPS16-201ENST00000380443 A0A1B0GVY2 172 aa13.77□□□□□ -0.21
VPS16-201ENST00000380443 CD164Q04900 197 aa13.77□□□□□ -0.21
VPS16-201ENST00000380443 ATP5EP56381 51 aaPredicted RBP13.76□□□□□ -0.21
VPS16-201ENST00000380443 Q96NJ1 140 aa13.76□□□□□ -0.21
VPS16-201ENST00000380443 DNAH5Q8TE73 4624 aa13.76□□□□□ -0.21
VPS16-201ENST00000380443 CASC2Q6XLA1 102 aa13.76□□□□□ -0.21
VPS16-201ENST00000380443 ANAPC11Q9NYG5 84 aa13.76□□□□□ -0.21
VPS16-201ENST00000380443 WFDC13Q8IUB5 93 aa13.75□□□□□ -0.21
VPS16-201ENST00000380443 EPPK1P58107 5090 aaKnown RBP13.74□□□□□ -0.21
VPS16-201ENST00000380443 HRCT1Q6UXD1 115 aa13.71□□□□□ -0.21
VPS16-201ENST00000380443 FAM229BQ4G0N7 80 aa13.69□□□□□ -0.22
VPS16-201ENST00000380443 PKD1P98161 4303 aa13.67□□□□□ -0.22
VPS16-201ENST00000380443 MMP24-AS1A0A0U1RRL7 71 aa13.67□□□□□ -0.22
VPS16-201ENST00000380443 CDK2AP2O75956 126 aa13.66□□□□□ -0.22
VPS16-201ENST00000380443 ZCCHC13Q8WW36 166 aaKnown RBP13.65□□□□□ -0.22
VPS16-201ENST00000380443 MP68P56378 58 aa13.64□□□□□ -0.23
VPS16-201ENST00000380443 SERP1Q9Y6X1 66 aa13.64□□□□□ -0.23
VPS16-201ENST00000380443 H3BPC8 53 aa13.63□□□□□ -0.23
VPS16-201ENST00000380443 hDV103S1A0JD37 113 aa13.62□□□□□ -0.23
VPS16-201ENST00000380443 ASB16-AS1Q495Z4 193 aa13.62□□□□□ -0.23
VPS16-201ENST00000380443 A0A1B0GVX0 72 aa13.62□□□□□ -0.23
VPS16-201ENST00000380443 PKHD1P08F94 4074 aa13.6□□□□□ -0.23
VPS16-201ENST00000380443 C8orf17Q9NRJ1 99 aa13.6□□□□□ -0.23
VPS16-201ENST00000380443 TP53AIP1Q9HCN2 124 aa13.57□□□□□ -0.24
VPS16-201ENST00000380443 BIRC6Q9NR09 4857 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms