RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 H0Y9J4 135 aa7.43□□□□□ -1.22
USP3-202ENST00000380324 ATOX1O00244 68 aa7.43□□□□□ -1.22
USP3-202ENST00000380324 CXCL6P80162 114 aa7.43□□□□□ -1.22
USP3-202ENST00000380324 Q8NBF4 154 aa7.43□□□□□ -1.22
USP3-202ENST00000380324 DNAH6Q9C0G6 4158 aa7.42□□□□□ -1.22
USP3-202ENST00000380324 NREPQ16612 68 aa7.42□□□□□ -1.22
USP3-202ENST00000380324 HYDINQ4G0P3 5121 aa7.41□□□□□ -1.22
USP3-202ENST00000380324 Q8N9L7 120 aa7.4□□□□□ -1.22
USP3-202ENST00000380324 ALMS1Q8TCU4 4167 aa7.4□□□□□ -1.22
USP3-202ENST00000380324 IGFL1Q6UW32 110 aa7.4□□□□□ -1.23
USP3-202ENST00000380324 DNAH8Q96JB1 4490 aa7.4□□□□□ -1.23
USP3-202ENST00000380324 KRTAP13-1Q8IUC0 172 aa7.39□□□□□ -1.23
USP3-202ENST00000380324 SPRR4Q96PI1 79 aa7.38□□□□□ -1.23
USP3-202ENST00000380324 BPY2O14599 106 aa7.37□□□□□ -1.23
USP3-202ENST00000380324 KRTAP10-2P60368 255 aa7.37□□□□□ -1.23
USP3-202ENST00000380324 PLAC8Q9NZF1 115 aa7.37□□□□□ -1.23
USP3-202ENST00000380324 PSORS1C2Q9UIG4 136 aa7.37□□□□□ -1.23
USP3-202ENST00000380324 UQCRQO14949 82 aa7.35□□□□□ -1.23
USP3-202ENST00000380324 COX7CP15954 63 aa7.35□□□□□ -1.23
USP3-202ENST00000380324 DNAH5Q8TE73 4624 aa7.35□□□□□ -1.23
USP3-202ENST00000380324 A0A1B0GW54 56 aa7.35□□□□□ -1.23
USP3-202ENST00000380324 CRYGAP11844 174 aa7.35□□□□□ -1.23
USP3-202ENST00000380324 SPRR1BP22528 89 aa7.35□□□□□ -1.23
USP3-202ENST00000380324 C9orf153Q5TBE3 101 aa7.35□□□□□ -1.23
USP3-202ENST00000380324 IGLV8-61A0A075B6I0 122 aa7.34□□□□□ -1.23
USP3-202ENST00000380324 SERP2Q8N6R1 65 aa7.34□□□□□ -1.23
USP3-202ENST00000380324 A0A087WSZ3 146 aa7.33□□□□□ -1.24
USP3-202ENST00000380324 IGKV4-1P06312 121 aa7.33□□□□□ -1.24
USP3-202ENST00000380324 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
USP3-202ENST00000380324 FAT2Q9NYQ8 4349 aa7.32□□□□□ -1.24
USP3-202ENST00000380324 IGLV9-49A0A0B4J1Y8 123 aa7.32□□□□□ -1.24
USP3-202ENST00000380324 FAM30AQ9NZY2 134 aa7.32□□□□□ -1.24
USP3-202ENST00000380324 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
USP3-202ENST00000380324 SS18L2Q9UHA2 77 aa7.3□□□□□ -1.24
USP3-202ENST00000380324 PKD1P98161 4303 aa7.29□□□□□ -1.24
USP3-202ENST00000380324 CIRBP-AS1Q8TBR5 109 aa7.29□□□□□ -1.24
USP3-202ENST00000380324 ZNF861PO60384 105 aa7.28□□□□□ -1.24
USP3-202ENST00000380324 CYSTM1Q9H1C7 97 aa7.28□□□□□ -1.24
USP3-202ENST00000380324 ANAPC11Q9NYG5 84 aa7.28□□□□□ -1.24
USP3-202ENST00000380324 K7EQZ3 153 aa7.27□□□□□ -1.25
USP3-202ENST00000380324 DSCR10P59022 87 aa7.27□□□□□ -1.25
USP3-202ENST00000380324 ZNF706Q9Y5V0 76 aaPredicted RBP7.27□□□□□ -1.25
USP3-202ENST00000380324 KRTAP10-1P60331 282 aa7.26□□□□□ -1.25
USP3-202ENST00000380324 LINC00483Q53H64 154 aa7.26□□□□□ -1.25
USP3-202ENST00000380324 SACSQ9NZJ4 4579 aa7.25□□□□□ -1.25
USP3-202ENST00000380324 IGLV7-43P04211 117 aa7.24□□□□□ -1.25
USP3-202ENST00000380324 PKHD1P08F94 4074 aa7.24□□□□□ -1.25
USP3-202ENST00000380324 TRAV7A0A075B6U4 112 aa7.24□□□□□ -1.25
USP3-202ENST00000380324 MOBPQ13875 183 aa7.24□□□□□ -1.25
USP3-202ENST00000380324 HRCT1Q6UXD1 115 aa7.23□□□□□ -1.25
USP3-202ENST00000380324 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
USP3-202ENST00000380324 Q6ZSA8 131 aa7.22□□□□□ -1.25
USP3-202ENST00000380324 SMIM20Q8N5G0 67 aa7.22□□□□□ -1.25
USP3-202ENST00000380324 RPL37AP61513 92 aaKnown RBP7.21□□□□□ -1.26
USP3-202ENST00000380324 LRP1BQ9NZR2 4599 aa7.19□□□□□ -1.26
USP3-202ENST00000380324 OCR1Q9BZK8 76 aa7.17□□□□□ -1.26
USP3-202ENST00000380324 SNURFQ9Y675 71 aa7.17□□□□□ -1.26
USP3-202ENST00000380324 HCG22E2RYF7 251 aa7.17□□□□□ -1.26
USP3-202ENST00000380324 LINC00472Q9H8W2 130 aa7.17□□□□□ -1.26
USP3-202ENST00000380324 WFDC13Q8IUB5 93 aa7.16□□□□□ -1.26
USP3-202ENST00000380324 VPS13BQ7Z7G8 4022 aa7.15□□□□□ -1.26
USP3-202ENST00000380324 LCE6AA0A183 80 aa7.14□□□□□ -1.27
USP3-202ENST00000380324 A8MWP4 228 aa7.13□□□□□ -1.27
USP3-202ENST00000380324 KLKP1Q107X0 134 aa7.12□□□□□ -1.27
USP3-202ENST00000380324 PRR15Q8IV56 129 aa7.12□□□□□ -1.27
USP3-202ENST00000380324 TMEM254Q8TBM7 123 aa7.12□□□□□ -1.27
USP3-202ENST00000380324 Q96NJ1 140 aa7.12□□□□□ -1.27
USP3-202ENST00000380324 TMEM258P61165 79 aa7.11□□□□□ -1.27
USP3-202ENST00000380324 A0A087X002 238 aa7.09□□□□□ -1.27
USP3-202ENST00000380324 H7BZZ5 65 aa7.09□□□□□ -1.27
USP3-202ENST00000380324 J3KT08 172 aa7.09□□□□□ -1.28
USP3-202ENST00000380324 CASC2Q6XLA1 102 aa7.09□□□□□ -1.28
USP3-202ENST00000380324 KMT2CQ8NEZ4 4911 aaKnown RBP7.08□□□□□ -1.28
USP3-202ENST00000380324 LINC00336Q6ZUF6 198 aa7.07□□□□□ -1.28
USP3-202ENST00000380324 NDUFB1O75438 58 aa7.07□□□□□ -1.28
USP3-202ENST00000380324 KRTAP29-1A8MX34 341 aaPredicted RBP7.06□□□□□ -1.28
USP3-202ENST00000380324 RYR2Q92736 4967 aa7.05□□□□□ -1.28
USP3-202ENST00000380324 SPINK6Q6UWN8 80 aa7.05□□□□□ -1.28
USP3-202ENST00000380324 A0A0U1RQV1 116 aa7.05□□□□□ -1.28
USP3-202ENST00000380324 KRTAP13-2Q52LG2 175 aa7.05□□□□□ -1.28
USP3-202ENST00000380324 MMP24-AS1A0A0U1RRL7 71 aa7.04□□□□□ -1.28
USP3-202ENST00000380324 DYNC1H1Q14204 4646 aaKnown RBP7.04□□□□□ -1.28
USP3-202ENST00000380324 IGHV6-1A0A0B4J1U7 121 aa7.04□□□□□ -1.28
USP3-202ENST00000380324 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
USP3-202ENST00000380324 CDK2AP2O75956 126 aa7.03□□□□□ -1.28
USP3-202ENST00000380324 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
USP3-202ENST00000380324 SSBP3-AS1Q7Z2R9 100 aa7.03□□□□□ -1.28
USP3-202ENST00000380324 KRTAP1-4P0C5Y4 121 aa7.02□□□□□ -1.28
USP3-202ENST00000380324 A0A1B0GVY2 172 aa7.02□□□□□ -1.29
USP3-202ENST00000380324 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.29
USP3-202ENST00000380324 hDV103S1A0JD37 113 aa7.01□□□□□ -1.29
USP3-202ENST00000380324 NDUFC1O43677 76 aa7.01□□□□□ -1.29
USP3-202ENST00000380324 A0A1B0GVX0 72 aa7□□□□□ -1.29
USP3-202ENST00000380324 CD164Q04900 197 aa7□□□□□ -1.29
USP3-202ENST00000380324 FAM229BQ4G0N7 80 aa7□□□□□ -1.29
USP3-202ENST00000380324 C8orf17Q9NRJ1 99 aa7□□□□□ -1.29
USP3-202ENST00000380324 C5orf47Q569G3 176 aa6.99□□□□□ -1.29
USP3-202ENST00000380324 PLA2G1BP04054 148 aaKnown RBP6.98□□□□□ -1.29
USP3-202ENST00000380324 SEC61GP60059 68 aa6.98□□□□□ -1.29
USP3-202ENST00000380324 APOBP04114 4563 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms