RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 hDV103S1A0JD37 113 aa7.31□□□□□ -1.24
SMAD9-202ENST00000379826 LCE6AA0A183 80 aa7.31□□□□□ -1.24
SMAD9-202ENST00000379826 RETNLBQ9BQ08 111 aa7.3□□□□□ -1.24
SMAD9-202ENST00000379826 IGLV5-48A0A075B6I7 105 aa7.3□□□□□ -1.24
SMAD9-202ENST00000379826 A8MUN3 132 aa7.29□□□□□ -1.24
SMAD9-202ENST00000379826 SEC61GP60059 68 aa7.28□□□□□ -1.24
SMAD9-202ENST00000379826 DSCR10P59022 87 aa7.28□□□□□ -1.24
SMAD9-202ENST00000379826 TLX1NBP0CAT3 122 aa7.28□□□□□ -1.24
SMAD9-202ENST00000379826 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
SMAD9-202ENST00000379826 FBN2P35556 2912 aa7.26□□□□□ -1.25
SMAD9-202ENST00000379826 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
SMAD9-202ENST00000379826 TRAV22A0A0B4J277 110 aa7.25□□□□□ -1.25
SMAD9-202ENST00000379826 USP24Q9UPU5 2620 aa7.25□□□□□ -1.25
SMAD9-202ENST00000379826 LIMD2Q9BT23 127 aa7.24□□□□□ -1.25
SMAD9-202ENST00000379826 TYMSOSQ8TAI1 123 aa7.24□□□□□ -1.25
SMAD9-202ENST00000379826 SPAG11AQ6PDA7 123 aa7.24□□□□□ -1.25
SMAD9-202ENST00000379826 A8MWP4 228 aa7.23□□□□□ -1.25
SMAD9-202ENST00000379826 CFAP46Q8IYW2 2715 aa7.23□□□□□ -1.25
SMAD9-202ENST00000379826 MOBPQ13875 183 aa7.22□□□□□ -1.25
SMAD9-202ENST00000379826 MAST4O15021 2626 aa7.22□□□□□ -1.25
SMAD9-202ENST00000379826 CELSR2Q9HCU4 2923 aa7.22□□□□□ -1.25
SMAD9-202ENST00000379826 PRR15Q8IV56 129 aa7.2□□□□□ -1.26
SMAD9-202ENST00000379826 MXRA5Q9NR99 2828 aa7.2□□□□□ -1.26
SMAD9-202ENST00000379826 IGLV5-37A0A075B6J1 123 aa7.2□□□□□ -1.26
SMAD9-202ENST00000379826 SPRR4Q96PI1 79 aa7.19□□□□□ -1.26
SMAD9-202ENST00000379826 APLNQ9ULZ1 77 aa7.19□□□□□ -1.26
SMAD9-202ENST00000379826 COA5Q86WW8 74 aa7.19□□□□□ -1.26
SMAD9-202ENST00000379826 K7ERS5 55 aa7.17□□□□□ -1.26
SMAD9-202ENST00000379826 SPACA4Q8TDM5 124 aa7.17□□□□□ -1.26
SMAD9-202ENST00000379826 A0A087WTM6 91 aa7.17□□□□□ -1.26
SMAD9-202ENST00000379826 H3BPC8 53 aa7.16□□□□□ -1.26
SMAD9-202ENST00000379826 ANAPC11Q9NYG5 84 aa7.16□□□□□ -1.26
SMAD9-202ENST00000379826 TEP1Q99973 2627 aaKnown RBP7.15□□□□□ -1.27
SMAD9-202ENST00000379826 ATRQ13535 2644 aa7.15□□□□□ -1.27
SMAD9-202ENST00000379826 SPRR1AP35321 89 aa7.14□□□□□ -1.27
SMAD9-202ENST00000379826 TP53AIP1Q9HCN2 124 aa7.13□□□□□ -1.27
SMAD9-202ENST00000379826 Q1T7F1 81 aa7.13□□□□□ -1.27
SMAD9-202ENST00000379826 TNP2Q05952 138 aa7.12□□□□□ -1.27
SMAD9-202ENST00000379826 CNBPP62633 177 aaKnown RBP7.12□□□□□ -1.27
SMAD9-202ENST00000379826 NF1P21359 2839 aa7.12□□□□□ -1.27
SMAD9-202ENST00000379826 APCP25054 2843 aa7.11□□□□□ -1.27
SMAD9-202ENST00000379826 NBPF19A0A087WUL8 3843 aa7.1□□□□□ -1.27
SMAD9-202ENST00000379826 AKAP9Q99996 3911 aa7.1□□□□□ -1.27
SMAD9-202ENST00000379826 C8orf17Q9NRJ1 99 aa7.1□□□□□ -1.27
SMAD9-202ENST00000379826 KRTAP4-16G5E9R7 235 aaPredicted RBP7.09□□□□□ -1.27
SMAD9-202ENST00000379826 M0R2T5 61 aa7.08□□□□□ -1.28
SMAD9-202ENST00000379826 UNC79Q9P2D8 2635 aa7.08□□□□□ -1.28
SMAD9-202ENST00000379826 Q5VSD8 79 aa7.07□□□□□ -1.28
SMAD9-202ENST00000379826 MRPL34Q9BQ48 92 aaKnown RBP7.07□□□□□ -1.28
SMAD9-202ENST00000379826 KRTAP7-1Q8IUC3 87 aa7.06□□□□□ -1.28
SMAD9-202ENST00000379826 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
SMAD9-202ENST00000379826 KRTAP1-5Q9BYS1 174 aa7.05□□□□□ -1.28
SMAD9-202ENST00000379826 SPINK1P00995 79 aa7.05□□□□□ -1.28
SMAD9-202ENST00000379826 A0A1B0GVX0 72 aa7.05□□□□□ -1.28
SMAD9-202ENST00000379826 ATP11AUNQ6ZP68 121 aa7.04□□□□□ -1.28
SMAD9-202ENST00000379826 C9orf163Q8N9P6 203 aa7.04□□□□□ -1.28
SMAD9-202ENST00000379826 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
SMAD9-202ENST00000379826 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
SMAD9-202ENST00000379826 IGKV2-30P06310 120 aa7.03□□□□□ -1.28
SMAD9-202ENST00000379826 ANK3Q12955 4377 aaKnown RBP7.02□□□□□ -1.29
SMAD9-202ENST00000379826 LINC00304Q8N9R0 145 aa7.02□□□□□ -1.29
SMAD9-202ENST00000379826 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
SMAD9-202ENST00000379826 ACYP2P14621 99 aa7.01□□□□□ -1.29
SMAD9-202ENST00000379826 MMP24-AS1A0A0U1RRL7 71 aa7.01□□□□□ -1.29
SMAD9-202ENST00000379826 UBR5O95071 2799 aaPredicted RBP7□□□□□ -1.29
SMAD9-202ENST00000379826 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7□□□□□ -1.29
SMAD9-202ENST00000379826 Q5VV11 94 aa7□□□□□ -1.29
SMAD9-202ENST00000379826 A0A1B0GU69 56 aa6.99□□□□□ -1.29
SMAD9-202ENST00000379826 PSORS1C2Q9UIG4 136 aa6.99□□□□□ -1.29
SMAD9-202ENST00000379826 ZNF469Q96JG9 3925 aaPredicted RBP6.99□□□□□ -1.29
SMAD9-202ENST00000379826 LINC00472Q9H8W2 130 aa6.98□□□□□ -1.29
SMAD9-202ENST00000379826 NIPBLQ6KC79 2804 aaeCLIP6.98□□□□□ -1.29
SMAD9-202ENST00000379826 LINC00313P59037 77 aa6.98□□□□□ -1.29
SMAD9-202ENST00000379826 Q8N9P0 234 aaPredicted RBP6.98□□□□□ -1.29
SMAD9-202ENST00000379826 ZCCHC13Q8WW36 166 aaKnown RBP6.98□□□□□ -1.29
SMAD9-202ENST00000379826 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
SMAD9-202ENST00000379826 C7orf65Q6ZTY9 151 aa6.98□□□□□ -1.29
SMAD9-202ENST00000379826 IGLV8-61A0A075B6I0 122 aa6.98□□□□□ -1.29
SMAD9-202ENST00000379826 CD164Q04900 197 aa6.97□□□□□ -1.29
SMAD9-202ENST00000379826 IGLV7-46A0A075B6I9 117 aa6.95□□□□□ -1.3
SMAD9-202ENST00000379826 ZNF861PO60384 105 aa6.95□□□□□ -1.3
SMAD9-202ENST00000379826 KTN1-AS1Q86SY8 53 aa6.94□□□□□ -1.3
SMAD9-202ENST00000379826 PANO1I0J062 215 aa6.93□□□□□ -1.3
SMAD9-202ENST00000379826 HIVEP1P15822 2718 aa6.93□□□□□ -1.3
SMAD9-202ENST00000379826 KRTAP29-1A8MX34 341 aaPredicted RBP6.93□□□□□ -1.3
SMAD9-202ENST00000379826 PRR26Q8N8Z3 221 aa6.92□□□□□ -1.3
SMAD9-202ENST00000379826 ITPR2Q14571 2701 aa6.92□□□□□ -1.3
SMAD9-202ENST00000379826 CDC42SE1Q9NRR8 79 aa6.91□□□□□ -1.3
SMAD9-202ENST00000379826 Q75L30 129 aa6.91□□□□□ -1.3
SMAD9-202ENST00000379826 A8MU10 97 aa6.9□□□□□ -1.3
SMAD9-202ENST00000379826 SPRR1BP22528 89 aa6.9□□□□□ -1.31
SMAD9-202ENST00000379826 HRES1P13985 223 aa6.89□□□□□ -1.31
SMAD9-202ENST00000379826 STAB1Q9NY15 2570 aa6.88□□□□□ -1.31
SMAD9-202ENST00000379826 COL6A5A8TX70 2615 aa6.87□□□□□ -1.31
SMAD9-202ENST00000379826 IGLV7-43P04211 117 aa6.87□□□□□ -1.31
SMAD9-202ENST00000379826 Q96NJ1 140 aa6.87□□□□□ -1.31
SMAD9-202ENST00000379826 C9orf92A6NGG3 77 aa6.86□□□□□ -1.31
SMAD9-202ENST00000379826 C8orf87E5RJ46 101 aa6.86□□□□□ -1.31
SMAD9-202ENST00000379826 SPINK7P58062 85 aa6.85□□□□□ -1.31
SMAD9-202ENST00000379826 LINC01558Q9Y6Z2 57 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms