RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 Q6JHZ5 121 aa13.45□□□□□ -0.26
TNFRSF4-201ENST00000379236 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF4-201ENST00000379236 RAB37Q96AX2 223 aa13.45□□□□□ -0.26
TNFRSF4-201ENST00000379236 C14orf144Q96I85 54 aa13.44□□□□□ -0.26
TNFRSF4-201ENST00000379236 PAM16Q9Y3D7 125 aa13.44□□□□□ -0.26
TNFRSF4-201ENST00000379236 SPATA45Q537H7 98 aa13.43□□□□□ -0.26
TNFRSF4-201ENST00000379236 PCOTHQ58A44 107 aa13.42□□□□□ -0.26
TNFRSF4-201ENST00000379236 PPDPFLQ8WWR9 84 aa13.41□□□□□ -0.26
TNFRSF4-201ENST00000379236 CLEC2BQ92478 149 aa13.41□□□□□ -0.26
TNFRSF4-201ENST00000379236 VAMP8Q9BV40 100 aa13.41□□□□□ -0.26
TNFRSF4-201ENST00000379236 SNCGO76070 127 aa13.4□□□□□ -0.26
TNFRSF4-201ENST00000379236 SNHG12Q9BXW3 62 aa13.4□□□□□ -0.26
TNFRSF4-201ENST00000379236 OCIAD2Q56VL3 154 aa13.39□□□□□ -0.27
TNFRSF4-201ENST00000379236 IGLV8-61A0A075B6I0 122 aa13.38□□□□□ -0.27
TNFRSF4-201ENST00000379236 HIGD1BQ9P298 99 aa13.38□□□□□ -0.27
TNFRSF4-201ENST00000379236 CFC1BP0CG36 223 aa13.37□□□□□ -0.27
TNFRSF4-201ENST00000379236 CFC1P0CG37 223 aa13.37□□□□□ -0.27
TNFRSF4-201ENST00000379236 IGFL1Q6UW32 110 aa13.37□□□□□ -0.27
TNFRSF4-201ENST00000379236 KRTAP9-2Q9BYQ4 174 aa13.36□□□□□ -0.27
TNFRSF4-201ENST00000379236 TRBV7-7A0A0K0K1E9 115 aa13.34□□□□□ -0.27
TNFRSF4-201ENST00000379236 A0A0B4J2C4 111 aa13.33□□□□□ -0.28
TNFRSF4-201ENST00000379236 H0YGX0 51 aa13.32□□□□□ -0.28
TNFRSF4-201ENST00000379236 TMEM238LA0A1B0GVL6 79 aa13.29□□□□□ -0.28
TNFRSF4-201ENST00000379236 A6NJY4 79 aa13.29□□□□□ -0.28
TNFRSF4-201ENST00000379236 C2orf91Q6ZV80 131 aa13.29□□□□□ -0.28
TNFRSF4-201ENST00000379236 H3BUT2 72 aa13.27□□□□□ -0.29
TNFRSF4-201ENST00000379236 RPL37P61927 97 aaKnown RBP13.27□□□□□ -0.29
TNFRSF4-201ENST00000379236 CEND1Q8N111 149 aa13.27□□□□□ -0.29
TNFRSF4-201ENST00000379236 GHRHP01286 108 aa13.24□□□□□ -0.29
TNFRSF4-201ENST00000379236 PRO1854Q9UHT4 67 aa13.23□□□□□ -0.29
TNFRSF4-201ENST00000379236 LST1O00453 97 aa13.22□□□□□ -0.29
TNFRSF4-201ENST00000379236 FAM218AQ96MZ4 157 aa13.21□□□□□ -0.29
TNFRSF4-201ENST00000379236 SS18L2Q9UHA2 77 aa13.2□□□□□ -0.3
TNFRSF4-201ENST00000379236 NDUFV3P56181 108 aaKnown RBP13.19□□□□□ -0.3
TNFRSF4-201ENST00000379236 A0A1B0GX51 115 aa13.18□□□□□ -0.3
TNFRSF4-201ENST00000379236 FABP2P12104 132 aa13.16□□□□□ -0.3
TNFRSF4-201ENST00000379236 FXYD2P54710 66 aa13.16□□□□□ -0.3
TNFRSF4-201ENST00000379236 Q6Q795 121 aa13.14□□□□□ -0.31
TNFRSF4-201ENST00000379236 TEN1Q86WV5 123 aa13.14□□□□□ -0.31
TNFRSF4-201ENST00000379236 OBSCN-AS1Q96MR7 158 aa13.14□□□□□ -0.31
TNFRSF4-201ENST00000379236 LCE2CQ5TA81 110 aa13.13□□□□□ -0.31
TNFRSF4-201ENST00000379236 H3BMG7 143 aa13.12□□□□□ -0.31
TNFRSF4-201ENST00000379236 TRIAP1O43715 76 aa13.11□□□□□ -0.31
TNFRSF4-201ENST00000379236 DNAL4O96015 105 aa13.11□□□□□ -0.31
TNFRSF4-201ENST00000379236 HSD52Q0P140 79 aa13.11□□□□□ -0.31
TNFRSF4-201ENST00000379236 PSMB2P49721 201 aa13.1□□□□□ -0.31
TNFRSF4-201ENST00000379236 KRTAP19-2Q3LHN2 52 aa13.09□□□□□ -0.31
TNFRSF4-201ENST00000379236 PYY3Q5JQD4 70 aa13.08□□□□□ -0.32
TNFRSF4-201ENST00000379236 ATP11AUNQ6ZP68 121 aa13.08□□□□□ -0.32
TNFRSF4-201ENST00000379236 A0A087WSZ3 146 aa13.07□□□□□ -0.32
TNFRSF4-201ENST00000379236 COX6B2Q6YFQ2 88 aa13.07□□□□□ -0.32
TNFRSF4-201ENST00000379236 MT1HP80294 61 aa13.05□□□□□ -0.32
TNFRSF4-201ENST00000379236 COX6CP09669 75 aa13.04□□□□□ -0.32
TNFRSF4-201ENST00000379236 Q75L30 129 aa13.04□□□□□ -0.32
TNFRSF4-201ENST00000379236 Q96NJ1 140 aa13.04□□□□□ -0.32
TNFRSF4-201ENST00000379236 ORMDL1Q9P0S3 153 aa13.04□□□□□ -0.32
TNFRSF4-201ENST00000379236 H3BQ85 93 aa13.02□□□□□ -0.33
TNFRSF4-201ENST00000379236 K7ERJ3 54 aa13.02□□□□□ -0.33
TNFRSF4-201ENST00000379236 TMA7Q9Y2S6 64 aaKnown RBP13.02□□□□□ -0.33
TNFRSF4-201ENST00000379236 UQCR10Q9UDW1 63 aa12.99□□□□□ -0.33
TNFRSF4-201ENST00000379236 A0A1B0GV72 72 aa12.98□□□□□ -0.33
TNFRSF4-201ENST00000379236 ANKRD29Q8N6D5 301 aa12.98□□□□□ -0.33
TNFRSF4-201ENST00000379236 M0R2T5 61 aa12.96□□□□□ -0.33
TNFRSF4-201ENST00000379236 TMEM256-PLSCR3K7ERE1 68 aa12.95□□□□□ -0.34
TNFRSF4-201ENST00000379236 SIGMAR1Q99720 223 aa12.95□□□□□ -0.34
TNFRSF4-201ENST00000379236 KRTAP9-6A0A140TA67 174 aa12.94□□□□□ -0.34
TNFRSF4-201ENST00000379236 A0A1W2PNM2 257 aa12.94□□□□□ -0.34
TNFRSF4-201ENST00000379236 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF4-201ENST00000379236 TRBV7-4A0A0J9YYF1 115 aa12.89□□□□□ -0.35
TNFRSF4-201ENST00000379236 SCGB1C2P0DMR2 95 aa12.88□□□□□ -0.35
TNFRSF4-201ENST00000379236 C20orf166-AS1Q96NR2 134 aa12.88□□□□□ -0.35
TNFRSF4-201ENST00000379236 DSCR10P59022 87 aa12.87□□□□□ -0.35
TNFRSF4-201ENST00000379236 IGKV4-1P06312 121 aa12.86□□□□□ -0.35
TNFRSF4-201ENST00000379236 A8MUU9 505 aa12.85□□□□□ -0.35
TNFRSF4-201ENST00000379236 TRACP01848 142 aa12.85□□□□□ -0.35
TNFRSF4-201ENST00000379236 CCKP06307 115 aa12.85□□□□□ -0.35
TNFRSF4-201ENST00000379236 UBE2V1Q13404 147 aa12.84□□□□□ -0.35
TNFRSF4-201ENST00000379236 LINC00313P59037 77 aa12.81□□□□□ -0.36
TNFRSF4-201ENST00000379236 KRTAP10-6P60371 365 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF4-201ENST00000379236 FLGP20930 4061 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF4-201ENST00000379236 VPS25Q9BRG1 176 aa12.79□□□□□ -0.36
TNFRSF4-201ENST00000379236 LORP23490 312 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF4-201ENST00000379236 TRBV20-1A0A075B6N2 111 aa12.76□□□□□ -0.37
TNFRSF4-201ENST00000379236 DEFB116Q30KQ4 102 aa12.76□□□□□ -0.37
TNFRSF4-201ENST00000379236 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
TNFRSF4-201ENST00000379236 DSCR8Q96T75 97 aa12.75□□□□□ -0.37
TNFRSF4-201ENST00000379236 LINC00472Q9H8W2 130 aa12.72□□□□□ -0.37
TNFRSF4-201ENST00000379236 IGHV6-1A0A0B4J1U7 121 aa12.7□□□□□ -0.38
TNFRSF4-201ENST00000379236 M0R143 59 aa12.68□□□□□ -0.38
TNFRSF4-201ENST00000379236 BAALC-AS2P0C853 105 aa12.68□□□□□ -0.38
TNFRSF4-201ENST00000379236 C9JAW5 83 aa12.66□□□□□ -0.38
TNFRSF4-201ENST00000379236 FSIP2Q5CZC0 6907 aa12.65□□□□□ -0.38
TNFRSF4-201ENST00000379236 KRTAP16-1A8MUX0 517 aa12.65□□□□□ -0.38
TNFRSF4-201ENST00000379236 C21orf62-AS1Q17RA5 79 aa12.65□□□□□ -0.38
TNFRSF4-201ENST00000379236 ATXN8Q156A1 80 aa12.63□□□□□ -0.39
TNFRSF4-201ENST00000379236 CRCT1Q9UGL9 99 aa12.63□□□□□ -0.39
TNFRSF4-201ENST00000379236 NOTCH2NLQ7Z3S9 236 aa12.62□□□□□ -0.39
TNFRSF4-201ENST00000379236 C8orf87E5RJ46 101 aa12.61□□□□□ -0.39
TNFRSF4-201ENST00000379236 A0A1B0GVX0 72 aa12.59□□□□□ -0.39
TNFRSF4-201ENST00000379236 FAM236DA0A1B0GTK5 79 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms