RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 C4orf48Q5BLP8 95 aa5.11□□□□□ -1.59
CKAP2-203ENST00000378037 PRYO14603 147 aa5.11□□□□□ -1.59
CKAP2-203ENST00000378037 Q6Q795 121 aa5.11□□□□□ -1.59
CKAP2-203ENST00000378037 SMIM29Q86T20 159 aa5.1□□□□□ -1.59
CKAP2-203ENST00000378037 KCNQ1DNQ9H478 68 aa5.1□□□□□ -1.59
CKAP2-203ENST00000378037 PCOTHQ58A44 107 aa5.1□□□□□ -1.59
CKAP2-203ENST00000378037 K7EQZ3 153 aa5.09□□□□□ -1.59
CKAP2-203ENST00000378037 NDUFB1O75438 58 aa5.09□□□□□ -1.59
CKAP2-203ENST00000378037 MPLKIPQ8TAP9 179 aa5.09□□□□□ -1.59
CKAP2-203ENST00000378037 FAM240AA0A1B0GVK7 77 aa5.08□□□□□ -1.6
CKAP2-203ENST00000378037 LINC00474Q9P2X8 69 aa5.08□□□□□ -1.6
CKAP2-203ENST00000378037 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
CKAP2-203ENST00000378037 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
CKAP2-203ENST00000378037 IGFL1Q6UW32 110 aa5.08□□□□□ -1.6
CKAP2-203ENST00000378037 KRTAP7-1Q8IUC3 87 aa5.08□□□□□ -1.6
CKAP2-203ENST00000378037 A0A1W2PNM2 257 aa5.08□□□□□ -1.6
CKAP2-203ENST00000378037 DNAH7Q8WXX0 4024 aa5.07□□□□□ -1.6
CKAP2-203ENST00000378037 PDE6GP18545 87 aa5.07□□□□□ -1.6
CKAP2-203ENST00000378037 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
CKAP2-203ENST00000378037 LINC00208Q96KT6 92 aa5.07□□□□□ -1.6
CKAP2-203ENST00000378037 OBSCN-AS1Q96MR7 158 aa5.06□□□□□ -1.6
CKAP2-203ENST00000378037 PRO0628Q9UI54 55 aa5.06□□□□□ -1.6
CKAP2-203ENST00000378037 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
CKAP2-203ENST00000378037 SERP2Q8N6R1 65 aa5.05□□□□□ -1.6
CKAP2-203ENST00000378037 V9GYY9 64 aa5.05□□□□□ -1.6
CKAP2-203ENST00000378037 A0A0U1RQV1 116 aa5.04□□□□□ -1.6
CKAP2-203ENST00000378037 UQCRQO14949 82 aa5.04□□□□□ -1.6
CKAP2-203ENST00000378037 Q8NBF4 154 aa5.04□□□□□ -1.6
CKAP2-203ENST00000378037 COX7CP15954 63 aa5.04□□□□□ -1.6
CKAP2-203ENST00000378037 BCE1O60756 84 aa5.04□□□□□ -1.6
CKAP2-203ENST00000378037 PRKDCP78527 4128 aaKnown RBP5.03□□□□□ -1.6
CKAP2-203ENST00000378037 HUWE1Q7Z6Z7 4374 aaKnown RBP5.03□□□□□ -1.6
CKAP2-203ENST00000378037 PLA2G1BP04054 148 aaKnown RBP5.03□□□□□ -1.6
CKAP2-203ENST00000378037 TRBV7-4A0A0J9YYF1 115 aa5.01□□□□□ -1.61
CKAP2-203ENST00000378037 CASC2Q6XLA1 102 aa5.01□□□□□ -1.61
CKAP2-203ENST00000378037 TRBV7-7A0A0K0K1E9 115 aa5.01□□□□□ -1.61
CKAP2-203ENST00000378037 KRTAP10-1P60331 282 aa5.01□□□□□ -1.61
CKAP2-203ENST00000378037 MP68P56378 58 aa5.01□□□□□ -1.61
CKAP2-203ENST00000378037 CNBPP62633 177 aaKnown RBP5.01□□□□□ -1.61
CKAP2-203ENST00000378037 DNAH1Q9P2D7 4330 aa5□□□□□ -1.61
CKAP2-203ENST00000378037 HCG22E2RYF7 251 aa5□□□□□ -1.61
CKAP2-203ENST00000378037 ALMS1Q8TCU4 4167 aa5□□□□□ -1.61
CKAP2-203ENST00000378037 TLX1NBP0CAT3 122 aa4.99□□□□□ -1.61
CKAP2-203ENST00000378037 C9orf92A6NGG3 77 aa4.98□□□□□ -1.61
CKAP2-203ENST00000378037 CRYGAP11844 174 aa4.98□□□□□ -1.61
CKAP2-203ENST00000378037 IMUPQ9GZP8 106 aa4.98□□□□□ -1.61
CKAP2-203ENST00000378037 C1orf195Q5TG92 126 aa4.98□□□□□ -1.61
CKAP2-203ENST00000378037 PLECQ15149 4684 aaKnown RBP4.98□□□□□ -1.61
CKAP2-203ENST00000378037 SPINK1P00995 79 aa4.98□□□□□ -1.61
CKAP2-203ENST00000378037 TMEM254Q8TBM7 123 aa4.98□□□□□ -1.61
CKAP2-203ENST00000378037 ZNF861PO60384 105 aa4.97□□□□□ -1.61
CKAP2-203ENST00000378037 IGKV2D-30A0A075B6S6 120 aa4.97□□□□□ -1.61
CKAP2-203ENST00000378037 LOC110117498A0A087WWA1 95 aa4.97□□□□□ -1.61
CKAP2-203ENST00000378037 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
CKAP2-203ENST00000378037 ATP5EP2Q5VTU8 51 aa4.97□□□□□ -1.61
CKAP2-203ENST00000378037 DSCR10P59022 87 aa4.96□□□□□ -1.61
CKAP2-203ENST00000378037 PRR26Q8N8Z3 221 aa4.96□□□□□ -1.61
CKAP2-203ENST00000378037 TYMSOSQ8TAI1 123 aa4.96□□□□□ -1.62
CKAP2-203ENST00000378037 H3BQ85 93 aa4.96□□□□□ -1.62
CKAP2-203ENST00000378037 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.62
CKAP2-203ENST00000378037 IGLV7-43P04211 117 aa4.95□□□□□ -1.62
CKAP2-203ENST00000378037 Q6ZRN7 208 aaPredicted RBP4.95□□□□□ -1.62
CKAP2-203ENST00000378037 TRBV7-6A0A0J9YX20 115 aa4.94□□□□□ -1.62
CKAP2-203ENST00000378037 SPRR4Q96PI1 79 aa4.94□□□□□ -1.62
CKAP2-203ENST00000378037 H0Y9P7 68 aa4.93□□□□□ -1.62
CKAP2-203ENST00000378037 FP248Q71RG6 208 aaPredicted RBP4.93□□□□□ -1.62
CKAP2-203ENST00000378037 DNAH9Q9NYC9 4486 aa4.93□□□□□ -1.62
CKAP2-203ENST00000378037 TRAV7A0A075B6U4 112 aa4.93□□□□□ -1.62
CKAP2-203ENST00000378037 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
CKAP2-203ENST00000378037 TMEM258P61165 79 aa4.92□□□□□ -1.62
CKAP2-203ENST00000378037 BRK1Q8WUW1 75 aa4.92□□□□□ -1.62
CKAP2-203ENST00000378037 PSPHP1O15172 72 aa4.91□□□□□ -1.62
CKAP2-203ENST00000378037 CXCL6P80162 114 aa4.91□□□□□ -1.62
CKAP2-203ENST00000378037 A0A087X002 238 aa4.91□□□□□ -1.62
CKAP2-203ENST00000378037 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
CKAP2-203ENST00000378037 SPRR1AP35321 89 aa4.91□□□□□ -1.62
CKAP2-203ENST00000378037 Q6ZR54 194 aa4.91□□□□□ -1.62
CKAP2-203ENST00000378037 KRTAP4-16G5E9R7 235 aaPredicted RBP4.9□□□□□ -1.62
CKAP2-203ENST00000378037 KMT2AQ03164 3969 aa4.9□□□□□ -1.62
CKAP2-203ENST00000378037 IGLV5-48A0A075B6I7 105 aa4.9□□□□□ -1.63
CKAP2-203ENST00000378037 C1orf64Q8NEQ6 169 aa4.9□□□□□ -1.63
CKAP2-203ENST00000378037 PLA2G2DQ9UNK4 145 aa4.9□□□□□ -1.63
CKAP2-203ENST00000378037 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
CKAP2-203ENST00000378037 Q96NJ1 140 aa4.88□□□□□ -1.63
CKAP2-203ENST00000378037 NOTCH2NLQ7Z3S9 236 aa4.88□□□□□ -1.63
CKAP2-203ENST00000378037 PRR15Q8IV56 129 aa4.88□□□□□ -1.63
CKAP2-203ENST00000378037 IGLV5-37A0A075B6J1 123 aa4.87□□□□□ -1.63
CKAP2-203ENST00000378037 DNAH11Q96DT5 4516 aa4.86□□□□□ -1.63
CKAP2-203ENST00000378037 LINC01600Q96MT4 127 aa4.86□□□□□ -1.63
CKAP2-203ENST00000378037 IGLV8-61A0A075B6I0 122 aa4.86□□□□□ -1.63
CKAP2-203ENST00000378037 A8MWP4 228 aa4.84□□□□□ -1.63
CKAP2-203ENST00000378037 PLAC8Q9NZF1 115 aa4.84□□□□□ -1.63
CKAP2-203ENST00000378037 FAM229AH3BQW9 127 aa4.84□□□□□ -1.64
CKAP2-203ENST00000378037 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.64
CKAP2-203ENST00000378037 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.64
CKAP2-203ENST00000378037 SPTSSBQ8NFR3 76 aa4.83□□□□□ -1.64
CKAP2-203ENST00000378037 LINC00313P59037 77 aa4.83□□□□□ -1.64
CKAP2-203ENST00000378037 PMAIP1Q13794 54 aa4.83□□□□□ -1.64
CKAP2-203ENST00000378037 FAM229BQ4G0N7 80 aa4.82□□□□□ -1.64
CKAP2-203ENST00000378037 C8orf17Q9NRJ1 99 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms