RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 A0A0G2JQZ4 141 aa5.43□□□□□ -1.54
CRNKL1-202ENST00000377340 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
CRNKL1-202ENST00000377340 LINC01547P58512 204 aaPredicted RBP5.42□□□□□ -1.54
CRNKL1-202ENST00000377340 CASC2Q6XLA1 102 aa5.42□□□□□ -1.54
CRNKL1-202ENST00000377340 Q8N9L7 120 aa5.42□□□□□ -1.54
CRNKL1-202ENST00000377340 KCNQ1DNQ9H478 68 aa5.42□□□□□ -1.54
CRNKL1-202ENST00000377340 SERP1Q9Y6X1 66 aa5.41□□□□□ -1.54
CRNKL1-202ENST00000377340 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
CRNKL1-202ENST00000377340 KRTAP10-2P60368 255 aa5.41□□□□□ -1.54
CRNKL1-202ENST00000377340 PRO0461Q9UI25 63 aa5.41□□□□□ -1.54
CRNKL1-202ENST00000377340 PSPHP1O15172 72 aa5.4□□□□□ -1.54
CRNKL1-202ENST00000377340 TLX1NBP0CAT3 122 aa5.4□□□□□ -1.54
CRNKL1-202ENST00000377340 Q8NBF4 154 aa5.4□□□□□ -1.55
CRNKL1-202ENST00000377340 FAM104AQ969W3 186 aa5.39□□□□□ -1.55
CRNKL1-202ENST00000377340 A0A087WVE0 104 aa5.39□□□□□ -1.55
CRNKL1-202ENST00000377340 ERC2-IT1O76042 136 aa5.39□□□□□ -1.55
CRNKL1-202ENST00000377340 TRBV7-6A0A0J9YX20 115 aa5.38□□□□□ -1.55
CRNKL1-202ENST00000377340 IMUPQ9GZP8 106 aa5.38□□□□□ -1.55
CRNKL1-202ENST00000377340 LINC00846Q9NV44 126 aa5.38□□□□□ -1.55
CRNKL1-202ENST00000377340 Q6ZVQ6 151 aa5.37□□□□□ -1.55
CRNKL1-202ENST00000377340 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
CRNKL1-202ENST00000377340 ATP5EP2Q5VTU8 51 aa5.37□□□□□ -1.55
CRNKL1-202ENST00000377340 KRTAP10-1P60331 282 aa5.36□□□□□ -1.55
CRNKL1-202ENST00000377340 A6NED7 52 aa5.35□□□□□ -1.55
CRNKL1-202ENST00000377340 SMCPP49901 116 aaPredicted RBP5.35□□□□□ -1.55
CRNKL1-202ENST00000377340 IGKV2D-30A0A075B6S6 120 aa5.34□□□□□ -1.55
CRNKL1-202ENST00000377340 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
CRNKL1-202ENST00000377340 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.55
CRNKL1-202ENST00000377340 LINC00208Q96KT6 92 aa5.33□□□□□ -1.56
CRNKL1-202ENST00000377340 Q8N377 158 aa5.33□□□□□ -1.56
CRNKL1-202ENST00000377340 C9orf92A6NGG3 77 aa5.32□□□□□ -1.56
CRNKL1-202ENST00000377340 Q6ZR54 194 aa5.32□□□□□ -1.56
CRNKL1-202ENST00000377340 HCG22E2RYF7 251 aa5.32□□□□□ -1.56
CRNKL1-202ENST00000377340 PLA2G2DQ9UNK4 145 aa5.32□□□□□ -1.56
CRNKL1-202ENST00000377340 Q96NJ1 140 aa5.31□□□□□ -1.56
CRNKL1-202ENST00000377340 PCOTHQ58A44 107 aa5.31□□□□□ -1.56
CRNKL1-202ENST00000377340 SSBP3-AS1Q7Z2R9 100 aa5.31□□□□□ -1.56
CRNKL1-202ENST00000377340 SPRR4Q96PI1 79 aa5.31□□□□□ -1.56
CRNKL1-202ENST00000377340 IGFL1Q6UW32 110 aa5.3□□□□□ -1.56
CRNKL1-202ENST00000377340 LINC00313P59037 77 aa5.29□□□□□ -1.56
CRNKL1-202ENST00000377340 Q5VSD8 79 aa5.29□□□□□ -1.56
CRNKL1-202ENST00000377340 KRTAP26-1Q6PEX3 210 aa5.29□□□□□ -1.56
CRNKL1-202ENST00000377340 PANO1I0J062 215 aa5.29□□□□□ -1.56
CRNKL1-202ENST00000377340 TRBV7-7A0A0K0K1E9 115 aa5.29□□□□□ -1.56
CRNKL1-202ENST00000377340 SPINK1P00995 79 aa5.28□□□□□ -1.56
CRNKL1-202ENST00000377340 Q6ZQT0 140 aa5.28□□□□□ -1.56
CRNKL1-202ENST00000377340 RBM12B-AS1Q9P1G2 102 aa5.28□□□□□ -1.56
CRNKL1-202ENST00000377340 Q8NDZ9 215 aa5.28□□□□□ -1.56
CRNKL1-202ENST00000377340 PLAC8Q9NZF1 115 aa5.28□□□□□ -1.56
CRNKL1-202ENST00000377340 SPAG11AQ6PDA7 123 aa5.27□□□□□ -1.57
CRNKL1-202ENST00000377340 OBSCN-AS1Q96MR7 158 aa5.27□□□□□ -1.57
CRNKL1-202ENST00000377340 hDV103S1A0JD37 113 aa5.26□□□□□ -1.57
CRNKL1-202ENST00000377340 ATP11AUNQ6ZP68 121 aa5.26□□□□□ -1.57
CRNKL1-202ENST00000377340 TRBV7-4A0A0J9YYF1 115 aa5.25□□□□□ -1.57
CRNKL1-202ENST00000377340 IGLV5-37A0A075B6J1 123 aa5.24□□□□□ -1.57
CRNKL1-202ENST00000377340 BSNQ9UPA5 3926 aa5.24□□□□□ -1.57
CRNKL1-202ENST00000377340 DSCR10P59022 87 aa5.24□□□□□ -1.57
CRNKL1-202ENST00000377340 COX6B2Q6YFQ2 88 aa5.24□□□□□ -1.57
CRNKL1-202ENST00000377340 SMIM29Q86T20 159 aa5.24□□□□□ -1.57
CRNKL1-202ENST00000377340 H0Y9P7 68 aa5.23□□□□□ -1.57
CRNKL1-202ENST00000377340 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
CRNKL1-202ENST00000377340 NDUFC1O43677 76 aa5.23□□□□□ -1.57
CRNKL1-202ENST00000377340 Q5XG85 94 aa5.23□□□□□ -1.57
CRNKL1-202ENST00000377340 TRRAPQ9Y4A5 3859 aa5.23□□□□□ -1.57
CRNKL1-202ENST00000377340 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
CRNKL1-202ENST00000377340 LOC110117498A0A087WWA1 95 aa5.21□□□□□ -1.58
CRNKL1-202ENST00000377340 K7EQZ3 153 aa5.21□□□□□ -1.58
CRNKL1-202ENST00000377340 Q6ZRN7 208 aaPredicted RBP5.21□□□□□ -1.58
CRNKL1-202ENST00000377340 KTN1-AS1Q86SY8 53 aa5.21□□□□□ -1.58
CRNKL1-202ENST00000377340 FBN3Q75N90 2809 aa5.21□□□□□ -1.58
CRNKL1-202ENST00000377340 A0A1W2PNM2 257 aa5.2□□□□□ -1.58
CRNKL1-202ENST00000377340 LINC01600Q96MT4 127 aa5.2□□□□□ -1.58
CRNKL1-202ENST00000377340 IGLV7-46A0A075B6I9 117 aa5.19□□□□□ -1.58
CRNKL1-202ENST00000377340 COL7A1Q02388 2944 aa5.19□□□□□ -1.58
CRNKL1-202ENST00000377340 CXCL6P80162 114 aa5.19□□□□□ -1.58
CRNKL1-202ENST00000377340 C1orf64Q8NEQ6 169 aa5.19□□□□□ -1.58
CRNKL1-202ENST00000377340 TRAV7A0A075B6U4 112 aa5.18□□□□□ -1.58
CRNKL1-202ENST00000377340 A8MWP4 228 aa5.17□□□□□ -1.58
CRNKL1-202ENST00000377340 A0A1B0GW54 56 aa5.17□□□□□ -1.58
CRNKL1-202ENST00000377340 LCA10Q71F78 164 aa5.15□□□□□ -1.59
CRNKL1-202ENST00000377340 MRPL34Q9BQ48 92 aaKnown RBP5.15□□□□□ -1.59
CRNKL1-202ENST00000377340 A8MUN3 132 aa5.14□□□□□ -1.59
CRNKL1-202ENST00000377340 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
CRNKL1-202ENST00000377340 OXTP01178 125 aa5.14□□□□□ -1.59
CRNKL1-202ENST00000377340 A0A1B0GVX0 72 aa5.13□□□□□ -1.59
CRNKL1-202ENST00000377340 SPRR1AP35321 89 aa5.13□□□□□ -1.59
CRNKL1-202ENST00000377340 C8orf17Q9NRJ1 99 aa5.13□□□□□ -1.59
CRNKL1-202ENST00000377340 C8orf87E5RJ46 101 aa5.13□□□□□ -1.59
CRNKL1-202ENST00000377340 PRR15Q8IV56 129 aa5.13□□□□□ -1.59
CRNKL1-202ENST00000377340 A0A0A0MQY5 61 aa5.13□□□□□ -1.59
CRNKL1-202ENST00000377340 C7orf65Q6ZTY9 151 aa5.13□□□□□ -1.59
CRNKL1-202ENST00000377340 TP53AIP1Q9HCN2 124 aa5.12□□□□□ -1.59
CRNKL1-202ENST00000377340 IGLV5-48A0A075B6I7 105 aa5.12□□□□□ -1.59
CRNKL1-202ENST00000377340 TRAV22A0A0B4J277 110 aa5.12□□□□□ -1.59
CRNKL1-202ENST00000377340 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
CRNKL1-202ENST00000377340 CYSTM1Q9H1C7 97 aa5.11□□□□□ -1.59
CRNKL1-202ENST00000377340 KRTAP11-1Q8IUC1 163 aa5.11□□□□□ -1.59
CRNKL1-202ENST00000377340 A0A087X002 238 aa5.09□□□□□ -1.6
CRNKL1-202ENST00000377340 Q6ZSA8 131 aa5.08□□□□□ -1.6
CRNKL1-202ENST00000377340 FP248Q71RG6 208 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms