RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 F8WEM9 126 aa10.38□□□□□ -0.75
HLA-A-202ENST00000376806 A0A1W2PNM2 257 aa10.36□□□□□ -0.75
HLA-A-202ENST00000376806 A0A087WVE0 104 aa10.36□□□□□ -0.75
HLA-A-202ENST00000376806 SPRR1BP22528 89 aa10.36□□□□□ -0.75
HLA-A-202ENST00000376806 HIST1H4AP62805 103 aaKnown RBP10.36□□□□□ -0.75
HLA-A-202ENST00000376806 HAMPP81172 84 aa10.36□□□□□ -0.75
HLA-A-202ENST00000376806 RYR3Q15413 4870 aa10.35□□□□□ -0.75
HLA-A-202ENST00000376806 Q8NBF4 154 aa10.35□□□□□ -0.75
HLA-A-202ENST00000376806 IGLV8-61A0A075B6I0 122 aa10.33□□□□□ -0.76
HLA-A-202ENST00000376806 A0A1B0GW54 56 aa10.33□□□□□ -0.76
HLA-A-202ENST00000376806 KRTAP10-2P60368 255 aa10.33□□□□□ -0.76
HLA-A-202ENST00000376806 CXCL6P80162 114 aa10.33□□□□□ -0.76
HLA-A-202ENST00000376806 SPRR4Q96PI1 79 aa10.32□□□□□ -0.76
HLA-A-202ENST00000376806 PSORS1C2Q9UIG4 136 aa10.32□□□□□ -0.76
HLA-A-202ENST00000376806 IGFL1Q6UW32 110 aa10.3□□□□□ -0.76
HLA-A-202ENST00000376806 DNAH11Q96DT5 4516 aa10.3□□□□□ -0.76
HLA-A-202ENST00000376806 NREPQ16612 68 aa10.3□□□□□ -0.76
HLA-A-202ENST00000376806 DNAH8Q96JB1 4490 aa10.29□□□□□ -0.76
HLA-A-202ENST00000376806 SCXQ7RTU7 201 aa10.29□□□□□ -0.76
HLA-A-202ENST00000376806 FAT2Q9NYQ8 4349 aa10.28□□□□□ -0.76
HLA-A-202ENST00000376806 ATOX1O00244 68 aa10.27□□□□□ -0.76
HLA-A-202ENST00000376806 A0A0G2JQZ4 141 aa10.27□□□□□ -0.77
HLA-A-202ENST00000376806 DNAH5Q8TE73 4624 aa10.27□□□□□ -0.77
HLA-A-202ENST00000376806 CRYGAP11844 174 aa10.26□□□□□ -0.77
HLA-A-202ENST00000376806 SRRM2Q9UQ35 2752 aaKnown RBP10.24□□□□□ -0.77
HLA-A-202ENST00000376806 FAM30AQ9NZY2 134 aa10.24□□□□□ -0.77
HLA-A-202ENST00000376806 PKD1P98161 4303 aa10.23□□□□□ -0.77
HLA-A-202ENST00000376806 CCDC179H3BU77 68 aa10.23□□□□□ -0.77
HLA-A-202ENST00000376806 BPY2O14599 106 aa10.22□□□□□ -0.77
HLA-A-202ENST00000376806 ZNF861PO60384 105 aa10.21□□□□□ -0.77
HLA-A-202ENST00000376806 LINC00483Q53H64 154 aa10.21□□□□□ -0.77
HLA-A-202ENST00000376806 CIRBP-AS1Q8TBR5 109 aa10.21□□□□□ -0.77
HLA-A-202ENST00000376806 ZNF706Q9Y5V0 76 aaPredicted RBP10.21□□□□□ -0.77
HLA-A-202ENST00000376806 Q6ZSA8 131 aa10.21□□□□□ -0.78
HLA-A-202ENST00000376806 KRTAP10-1P60331 282 aa10.2□□□□□ -0.78
HLA-A-202ENST00000376806 SVIPQ8NHG7 77 aa10.19□□□□□ -0.78
HLA-A-202ENST00000376806 IGKV4-1P06312 121 aa10.18□□□□□ -0.78
HLA-A-202ENST00000376806 IGLV7-43P04211 117 aa10.17□□□□□ -0.78
HLA-A-202ENST00000376806 Q8N9L7 120 aa10.17□□□□□ -0.78
HLA-A-202ENST00000376806 A0A087WSZ3 146 aa10.17□□□□□ -0.78
HLA-A-202ENST00000376806 COX7CP15954 63 aa10.15□□□□□ -0.78
HLA-A-202ENST00000376806 IGLV9-49A0A0B4J1Y8 123 aa10.15□□□□□ -0.79
HLA-A-202ENST00000376806 UQCRQO14949 82 aa10.14□□□□□ -0.79
HLA-A-202ENST00000376806 C9orf153Q5TBE3 101 aa10.14□□□□□ -0.79
HLA-A-202ENST00000376806 SERP2Q8N6R1 65 aa10.14□□□□□ -0.79
HLA-A-202ENST00000376806 LINC00336Q6ZUF6 198 aa10.13□□□□□ -0.79
HLA-A-202ENST00000376806 A0A1B0GVY2 172 aa10.1□□□□□ -0.79
HLA-A-202ENST00000376806 PKHD1P08F94 4074 aa10.1□□□□□ -0.79
HLA-A-202ENST00000376806 DSCR10P59022 87 aa10.1□□□□□ -0.79
HLA-A-202ENST00000376806 RPL37AP61513 92 aaKnown RBP10.1□□□□□ -0.79
HLA-A-202ENST00000376806 ANAPC11Q9NYG5 84 aa10.08□□□□□ -0.8
HLA-A-202ENST00000376806 MOBPQ13875 183 aa10.07□□□□□ -0.8
HLA-A-202ENST00000376806 K7EQZ3 153 aa10.06□□□□□ -0.8
HLA-A-202ENST00000376806 SMIM20Q8N5G0 67 aa10.06□□□□□ -0.8
HLA-A-202ENST00000376806 DEFB116Q30KQ4 102 aa10.04□□□□□ -0.8
HLA-A-202ENST00000376806 TRAV7A0A075B6U4 112 aa10.04□□□□□ -0.8
HLA-A-202ENST00000376806 LINC00472Q9H8W2 130 aa10.01□□□□□ -0.81
HLA-A-202ENST00000376806 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
HLA-A-202ENST00000376806 DYNC1H1Q14204 4646 aaKnown RBP9.99□□□□□ -0.81
HLA-A-202ENST00000376806 LRP1BQ9NZR2 4599 aa9.99□□□□□ -0.81
HLA-A-202ENST00000376806 EPPK1P58107 5090 aaKnown RBP9.98□□□□□ -0.81
HLA-A-202ENST00000376806 SS18L2Q9UHA2 77 aa9.96□□□□□ -0.81
HLA-A-202ENST00000376806 HCG22E2RYF7 251 aa9.95□□□□□ -0.82
HLA-A-202ENST00000376806 OCR1Q9BZK8 76 aa9.95□□□□□ -0.82
HLA-A-202ENST00000376806 CYSTM1Q9H1C7 97 aa9.95□□□□□ -0.82
HLA-A-202ENST00000376806 A8MWP4 228 aa9.94□□□□□ -0.82
HLA-A-202ENST00000376806 Q96NJ1 140 aa9.94□□□□□ -0.82
HLA-A-202ENST00000376806 J3KT08 172 aa9.93□□□□□ -0.82
HLA-A-202ENST00000376806 C20orf197Q8N268 126 aa9.93□□□□□ -0.82
HLA-A-202ENST00000376806 PRR15Q8IV56 129 aa9.92□□□□□ -0.82
HLA-A-202ENST00000376806 SSBP3-AS1Q7Z2R9 100 aa9.91□□□□□ -0.82
HLA-A-202ENST00000376806 FAM229BQ4G0N7 80 aa9.9□□□□□ -0.82
HLA-A-202ENST00000376806 A0A087X002 238 aa9.89□□□□□ -0.83
HLA-A-202ENST00000376806 CD164Q04900 197 aa9.89□□□□□ -0.83
HLA-A-202ENST00000376806 VPS13BQ7Z7G8 4022 aa9.88□□□□□ -0.83
HLA-A-202ENST00000376806 WFDC13Q8IUB5 93 aa9.88□□□□□ -0.83
HLA-A-202ENST00000376806 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
HLA-A-202ENST00000376806 KRTAP13-2Q52LG2 175 aa9.87□□□□□ -0.83
HLA-A-202ENST00000376806 KLKP1Q107X0 134 aa9.85□□□□□ -0.83
HLA-A-202ENST00000376806 APOBP04114 4563 aaKnown RBP9.85□□□□□ -0.83
HLA-A-202ENST00000376806 KRTAP29-1A8MX34 341 aaPredicted RBP9.85□□□□□ -0.83
HLA-A-202ENST00000376806 NDUFB1O75438 58 aa9.85□□□□□ -0.83
HLA-A-202ENST00000376806 CASC2Q6XLA1 102 aa9.83□□□□□ -0.84
HLA-A-202ENST00000376806 SNURFQ9Y675 71 aa9.83□□□□□ -0.84
HLA-A-202ENST00000376806 TMEM254Q8TBM7 123 aa9.83□□□□□ -0.84
HLA-A-202ENST00000376806 MMP24-AS1A0A0U1RRL7 71 aa9.82□□□□□ -0.84
HLA-A-202ENST00000376806 TMEM258P61165 79 aa9.81□□□□□ -0.84
HLA-A-202ENST00000376806 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
HLA-A-202ENST00000376806 A0A1B0GVX0 72 aa9.79□□□□□ -0.84
HLA-A-202ENST00000376806 SMR3BP02814 79 aaPredicted RBP9.79□□□□□ -0.84
HLA-A-202ENST00000376806 A0A0U1RQV1 116 aa9.78□□□□□ -0.84
HLA-A-202ENST00000376806 CDK2AP2O75956 126 aa9.78□□□□□ -0.84
HLA-A-202ENST00000376806 H7BZZ5 65 aa9.77□□□□□ -0.85
HLA-A-202ENST00000376806 ASB16-AS1Q495Z4 193 aa9.77□□□□□ -0.85
HLA-A-202ENST00000376806 KIAA1109Q2LD37 5005 aa9.76□□□□□ -0.85
HLA-A-202ENST00000376806 PLA2G1BP04054 148 aaKnown RBP9.76□□□□□ -0.85
HLA-A-202ENST00000376806 C8orf17Q9NRJ1 99 aa9.76□□□□□ -0.85
HLA-A-202ENST00000376806 IGHV6-1A0A0B4J1U7 121 aa9.74□□□□□ -0.85
HLA-A-202ENST00000376806 hDV103S1A0JD37 113 aa9.74□□□□□ -0.85
HLA-A-202ENST00000376806 NDUFC1O43677 76 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms